RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 VGFO15240 615 aaPredicted RBP24.97■■□□□ 1.59
UPF3A-206ENST00000480362 NUTM2DQ5VT03 806 aaPredicted RBP24.97■■□□□ 1.59
UPF3A-206ENST00000480362 UBR1Q8IWV7 1749 aa24.97■■□□□ 1.59
UPF3A-206ENST00000480362 KDM5AP29375 1690 aaKnown RBP24.97■■□□□ 1.59
UPF3A-206ENST00000480362 MYO3AQ8NEV4 1616 aa24.96■■□□□ 1.59
UPF3A-206ENST00000480362 RALGAPBQ86X10 1494 aa24.95■■□□□ 1.58
UPF3A-206ENST00000480362 NRXN1Q9ULB1 1477 aa24.94■■□□□ 1.58
UPF3A-206ENST00000480362 TRPM1Q7Z4N2 1603 aa24.94■■□□□ 1.58
UPF3A-206ENST00000480362 ZFYVE9O95405 1425 aa24.93■■□□□ 1.58
UPF3A-206ENST00000480362 RIMS2Q9UQ26 1411 aa24.93■■□□□ 1.58
UPF3A-206ENST00000480362 SETD1BQ9UPS6 1966 aaKnown RBP24.91■■□□□ 1.58
UPF3A-206ENST00000480362 NBPF1Q3BBV0 1214 aa24.91■■□□□ 1.58
UPF3A-206ENST00000480362 HDGFP51858 240 aaKnown RBP24.9■■□□□ 1.58
UPF3A-206ENST00000480362 THEMISQ8N1K5 641 aaPredicted RBP24.9■■□□□ 1.58
UPF3A-206ENST00000480362 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.9■■□□□ 1.58
UPF3A-206ENST00000480362 ROCK2O75116 1388 aaKnown RBP24.9■■□□□ 1.58
UPF3A-206ENST00000480362 TMEM2Q9UHN6 1383 aa24.89■■□□□ 1.57
UPF3A-206ENST00000480362 CEP170BQ9Y4F5 1589 aaPredicted RBP24.88■■□□□ 1.57
UPF3A-206ENST00000480362 ZNF316A6NFI3 1004 aaPredicted RBP24.88■■□□□ 1.57
UPF3A-206ENST00000480362 CFAP70Q5T0N1 1121 aa24.88■■□□□ 1.57
UPF3A-206ENST00000480362 CARD11Q9BXL7 1154 aa24.88■■□□□ 1.57
UPF3A-206ENST00000480362 PIK3C2GO75747 1445 aa24.87■■□□□ 1.57
UPF3A-206ENST00000480362 EIF4G2P78344 907 aaKnown RBP eCLIP24.86■■□□□ 1.57
UPF3A-206ENST00000480362 KIAA1210Q9ULL0 1709 aa24.86■■□□□ 1.57
UPF3A-206ENST00000480362 C14orf93Q9H972 538 aaKnown RBP24.85■■□□□ 1.57
UPF3A-206ENST00000480362 GPRASP1Q5JY77 1395 aa24.84■■□□□ 1.57
UPF3A-206ENST00000480362 ZNF142P52746 1687 aaPredicted RBP24.84■■□□□ 1.57
UPF3A-206ENST00000480362 HSPA5P11021 654 aaKnown RBP24.83■■□□□ 1.57
UPF3A-206ENST00000480362 SENP3Q9H4L4 574 aaPredicted RBP24.83■■□□□ 1.57
UPF3A-206ENST00000480362 TXNDC2Q86VQ3 553 aa24.82■■□□□ 1.56
UPF3A-206ENST00000480362 HIRIP3Q9BW71 556 aaPredicted RBP24.82■■□□□ 1.56
UPF3A-206ENST00000480362 ARHGAP23Q9P227 1491 aa24.82■■□□□ 1.56
UPF3A-206ENST00000480362 SLIT1O75093 1534 aa24.81■■□□□ 1.56
UPF3A-206ENST00000480362 EID1Q9Y6B2 187 aa24.81■■□□□ 1.56
UPF3A-206ENST00000480362 LTKP29376 864 aa24.8■■□□□ 1.56
UPF3A-206ENST00000480362 LAMC1P11047 1609 aa24.79■■□□□ 1.56
UPF3A-206ENST00000480362 USP47Q96K76 1375 aa24.79■■□□□ 1.56
UPF3A-206ENST00000480362 TMEM132EQ6IEE7 984 aa24.75■■□□□ 1.55
UPF3A-206ENST00000480362 BCANQ96GW7 911 aa24.75■■□□□ 1.55
UPF3A-206ENST00000480362 SETBP1Q9Y6X0 1596 aa24.75■■□□□ 1.55
UPF3A-206ENST00000480362 ALKQ9UM73 1620 aa24.74■■□□□ 1.55
UPF3A-206ENST00000480362 PLEKHG1Q9ULL1 1385 aa24.73■■□□□ 1.55
UPF3A-206ENST00000480362 ADGRB1O14514 1584 aa24.71■■□□□ 1.55
UPF3A-206ENST00000480362 SCAF11Q99590 1463 aaKnown RBP24.71■■□□□ 1.55
UPF3A-206ENST00000480362 ANKLE2Q86XL3 938 aa24.71■■□□□ 1.55
UPF3A-206ENST00000480362 NRXN3Q9Y4C0 1643 aa24.71■■□□□ 1.55
UPF3A-206ENST00000480362 ST20-MTHFSA0A0A6YYL1 179 aa24.7■■□□□ 1.54
UPF3A-206ENST00000480362 IQGAP1P46940 1657 aa24.69■■□□□ 1.54
UPF3A-206ENST00000480362 ASXL1Q8IXJ9 1541 aa24.67■■□□□ 1.54
UPF3A-206ENST00000480362 TRAK1Q9UPV9 953 aa24.66■■□□□ 1.54
UPF3A-206ENST00000480362 SETD1AO15047 1707 aaKnown RBP24.65■■□□□ 1.54
UPF3A-206ENST00000480362 ADAMTS13Q76LX8 1427 aa24.65■■□□□ 1.54
UPF3A-206ENST00000480362 SLC26A8Q96RN1 970 aa24.63■■□□□ 1.53
UPF3A-206ENST00000480362 STK26Q9P289 416 aa24.63■■□□□ 1.53
UPF3A-206ENST00000480362 EIF3AQ14152 1382 aaKnown RBP24.63■■□□□ 1.53
UPF3A-206ENST00000480362 METP08581 1390 aa24.62■■□□□ 1.53
UPF3A-206ENST00000480362 YTHDC2Q9H6S0 1430 aaKnown RBP24.61■■□□□ 1.53
UPF3A-206ENST00000480362 TBX22Q9Y458 520 aa24.61■■□□□ 1.53
UPF3A-206ENST00000480362 MED14O60244 1454 aa24.61■■□□□ 1.53
UPF3A-206ENST00000480362 NCKAP5LQ9HCH0 1330 aa24.61■■□□□ 1.53
UPF3A-206ENST00000480362 C11orf95C9JLR9 678 aaPredicted RBP24.59■■□□□ 1.53
UPF3A-206ENST00000480362 HSPA2P54652 639 aa24.59■■□□□ 1.53
UPF3A-206ENST00000480362 LMTK3Q96Q04 1460 aa24.58■■□□□ 1.53
UPF3A-206ENST00000480362 LRPPRCP42704 1394 aaKnown RBP24.58■■□□□ 1.53
UPF3A-206ENST00000480362 TESK2Q96S53 571 aa24.58■■□□□ 1.53
UPF3A-206ENST00000480362 AEBP2Q6ZN18 517 aaPredicted RBP24.57■■□□□ 1.52
UPF3A-206ENST00000480362 POLR1AO95602 1720 aaPredicted RBP24.57■■□□□ 1.52
UPF3A-206ENST00000480362 NPHP4O75161 1426 aaPredicted RBP24.56■■□□□ 1.52
UPF3A-206ENST00000480362 CENPJQ9HC77 1338 aaPredicted RBP24.56■■□□□ 1.52
UPF3A-206ENST00000480362 DIP2AQ14689 1571 aa24.55■■□□□ 1.52
UPF3A-206ENST00000480362 WASHC2AQ641Q2 1341 aa24.55■■□□□ 1.52
UPF3A-206ENST00000480362 ABCC11Q96J66 1382 aa24.54■■□□□ 1.52
UPF3A-206ENST00000480362 ARHGEF28Q8N1W1 1705 aaKnown RBP24.54■■□□□ 1.52
UPF3A-206ENST00000480362 CCDC7Q96M83 1385 aa24.52■■□□□ 1.52
UPF3A-206ENST00000480362 TMF1P82094 1093 aa24.51■■□□□ 1.51
UPF3A-206ENST00000480362 KIF7Q2M1P5 1343 aa24.51■■□□□ 1.51
UPF3A-206ENST00000480362 DLC1Q96QB1 1528 aa24.51■■□□□ 1.51
UPF3A-206ENST00000480362 PRAM1Q96QH2 718 aa24.5■■□□□ 1.51
UPF3A-206ENST00000480362 POGKQ9P215 609 aa24.5■■□□□ 1.51
UPF3A-206ENST00000480362 PTPRUQ92729 1446 aa24.5■■□□□ 1.51
UPF3A-206ENST00000480362 SLC24A1O60721 1099 aa24.49■■□□□ 1.51
UPF3A-206ENST00000480362 SIRT1Q96EB6 747 aa24.48■■□□□ 1.51
UPF3A-206ENST00000480362 AMOTL2Q9Y2J4 779 aa24.48■■□□□ 1.51
UPF3A-206ENST00000480362 QRICH2Q9H0J4 1663 aa24.47■■□□□ 1.51
UPF3A-206ENST00000480362 TECPR2O15040 1411 aa24.47■■□□□ 1.51
UPF3A-206ENST00000480362 PIK3R4Q99570 1358 aa24.47■■□□□ 1.51
UPF3A-206ENST00000480362 DISP3Q9P2K9 1392 aa24.47■■□□□ 1.51
UPF3A-206ENST00000480362 SBNO2Q9Y2G9 1366 aa24.47■■□□□ 1.51
UPF3A-206ENST00000480362 DDX10Q13206 875 aaKnown RBP24.47■■□□□ 1.51
UPF3A-206ENST00000480362 SAFB2Q14151 953 aaKnown RBP eCLIP24.47■■□□□ 1.51
UPF3A-206ENST00000480362 POLR3GLQ9BT43 218 aa24.47■■□□□ 1.51
UPF3A-206ENST00000480362 KNDC1Q76NI1 1749 aa24.47■■□□□ 1.51
UPF3A-206ENST00000480362 WAPLQ7Z5K2 1190 aa24.46■■□□□ 1.51
UPF3A-206ENST00000480362 DIEXFQ68CQ4 756 aaKnown RBP24.45■■□□□ 1.5
UPF3A-206ENST00000480362 CPS1P31327 1500 aa24.44■■□□□ 1.5
UPF3A-206ENST00000480362 FAM135BQ49AJ0 1406 aa24.44■■□□□ 1.5
UPF3A-206ENST00000480362 PLEKHH1Q9ULM0 1364 aa24.43■■□□□ 1.5
UPF3A-206ENST00000480362 ROBO2Q9HCK4 1378 aa24.42■■□□□ 1.5
UPF3A-206ENST00000480362 CDCA8Q53HL2 280 aa24.41■■□□□ 1.5
UPF3A-206ENST00000480362 MINK1Q8N4C8 1332 aaPredicted RBP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms