RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 SCAF1Q9H7N4 1312 aaKnown RBP22.69■■□□□ 1.22
PRKN-207ENST00000479615 PIP4K2BP78356 416 aa22.69■■□□□ 1.22
PRKN-207ENST00000479615 HFM1A2PYH4 1435 aa22.68■■□□□ 1.22
PRKN-207ENST00000479615 SLC26A8Q96RN1 970 aa22.68■■□□□ 1.22
PRKN-207ENST00000479615 TMEM131LA2VDJ0 1609 aa22.68■■□□□ 1.22
PRKN-207ENST00000479615 TBX22Q9Y458 520 aa22.66■■□□□ 1.22
PRKN-207ENST00000479615 STRCP1A6NGW2 1772 aa22.63■■□□□ 1.21
PRKN-207ENST00000479615 ACIN1Q9UKV3 1341 aaKnown RBP22.63■■□□□ 1.21
PRKN-207ENST00000479615 PROSER2Q86WR7 435 aaPredicted RBP22.62■■□□□ 1.21
PRKN-207ENST00000479615 DISP3Q9P2K9 1392 aa22.62■■□□□ 1.21
PRKN-207ENST00000479615 NKTRP30414 1462 aaKnown RBP22.6■■□□□ 1.21
PRKN-207ENST00000479615 HSPA1LP34931 641 aa22.6■■□□□ 1.21
PRKN-207ENST00000479615 TRIM52Q96A61 297 aa22.6■■□□□ 1.21
PRKN-207ENST00000479615 PIK3R4Q99570 1358 aa22.6■■□□□ 1.21
PRKN-207ENST00000479615 TMEM94Q12767 1356 aa22.59■■□□□ 1.21
PRKN-207ENST00000479615 SLC4A1APQ9BWU0 796 aaKnown RBP22.56■■□□□ 1.2
PRKN-207ENST00000479615 NWD1Q149M9 1564 aa22.55■■□□□ 1.2
PRKN-207ENST00000479615 ZNF326Q5BKZ1 582 aaKnown RBP22.55■■□□□ 1.2
PRKN-207ENST00000479615 ALKQ9UM73 1620 aa22.55■■□□□ 1.2
PRKN-207ENST00000479615 NCOA3Q9Y6Q9 1424 aa22.55■■□□□ 1.2
PRKN-207ENST00000479615 DIP2AQ14689 1571 aa22.55■■□□□ 1.2
PRKN-207ENST00000479615 SPHKAPQ2M3C7 1700 aa22.54■■□□□ 1.2
PRKN-207ENST00000479615 MYO5BQ9ULV0 1848 aa22.53■■□□□ 1.2
PRKN-207ENST00000479615 TRPM2O94759 1503 aa22.52■■□□□ 1.2
PRKN-207ENST00000479615 FAM135BQ49AJ0 1406 aa22.52■■□□□ 1.2
PRKN-207ENST00000479615 ADAMTS13Q76LX8 1427 aa22.52■■□□□ 1.2
PRKN-207ENST00000479615 MSH6P52701 1360 aa22.51■■□□□ 1.19
PRKN-207ENST00000479615 NUTM2DQ5VT03 806 aaPredicted RBP22.51■■□□□ 1.19
PRKN-207ENST00000479615 SENP3Q9H4L4 574 aaPredicted RBP22.47■■□□□ 1.19
PRKN-207ENST00000479615 RPGRIP1LQ68CZ1 1315 aa22.47■■□□□ 1.19
PRKN-207ENST00000479615 CHD2O14647 1828 aaKnown RBP22.46■■□□□ 1.19
PRKN-207ENST00000479615 VGFO15240 615 aaPredicted RBP22.46■■□□□ 1.19
PRKN-207ENST00000479615 XIRP1Q702N8 1843 aaKnown RBP22.45■■□□□ 1.19
PRKN-207ENST00000479615 AMOTL2Q9Y2J4 779 aa22.44■■□□□ 1.18
PRKN-207ENST00000479615 SETBP1Q9Y6X0 1596 aa22.43■■□□□ 1.18
PRKN-207ENST00000479615 RBM33Q96EV2 1170 aaKnown RBP22.43■■□□□ 1.18
PRKN-207ENST00000479615 C19orf44Q9H6X5 657 aa22.43■■□□□ 1.18
PRKN-207ENST00000479615 SLAIN2Q9P270 581 aa22.43■■□□□ 1.18
PRKN-207ENST00000479615 CLTCL1P53675 1640 aa22.42■■□□□ 1.18
PRKN-207ENST00000479615 C14orf37Q86TY3 774 aa22.42■■□□□ 1.18
PRKN-207ENST00000479615 CADPS2Q86UW7 1296 aa22.42■■□□□ 1.18
PRKN-207ENST00000479615 MPHOSPH9Q99550 1183 aa22.41■■□□□ 1.18
PRKN-207ENST00000479615 KIF1BO60333 1816 aa22.38■■□□□ 1.17
PRKN-207ENST00000479615 NEXMIFQ5QGS0 1516 aa22.38■■□□□ 1.17
PRKN-207ENST00000479615 ATF3P18847 181 aa22.38■■□□□ 1.17
PRKN-207ENST00000479615 CCDC144AA2RUR9 1427 aa22.37■■□□□ 1.17
PRKN-207ENST00000479615 SETD5Q9C0A6 1442 aa22.37■■□□□ 1.17
PRKN-207ENST00000479615 ILDR2Q71H61 639 aa22.36■■□□□ 1.17
PRKN-207ENST00000479615 PTPRUQ92729 1446 aa22.35■■□□□ 1.17
PRKN-207ENST00000479615 METP08581 1390 aa22.34■■□□□ 1.17
PRKN-207ENST00000479615 MED1Q15648 1581 aaPredicted RBP22.33■■□□□ 1.17
PRKN-207ENST00000479615 NRXN3Q9Y4C0 1643 aa22.33■■□□□ 1.17
PRKN-207ENST00000479615 PHF23Q9BUL5 403 aaPredicted RBP22.33■■□□□ 1.17
PRKN-207ENST00000479615 DCCP43146 1447 aa22.32■■□□□ 1.16
PRKN-207ENST00000479615 FOXD1Q16676 465 aa22.32■■□□□ 1.16
PRKN-207ENST00000479615 SOCS7O14512 581 aa22.31■■□□□ 1.16
PRKN-207ENST00000479615 ROBO1Q9Y6N7 1651 aa22.3■■□□□ 1.16
PRKN-207ENST00000479615 ANKRD30BQ9BXX2 1392 aa22.29■■□□□ 1.16
PRKN-207ENST00000479615 HRCP23327 699 aa22.28■■□□□ 1.16
PRKN-207ENST00000479615 XRN1Q8IZH2 1706 aaKnown RBP22.28■■□□□ 1.16
PRKN-207ENST00000479615 RAB3GAP2Q9H2M9 1393 aa22.25■■□□□ 1.15
PRKN-207ENST00000479615 PTCH1Q13635 1447 aa22.24■■□□□ 1.15
PRKN-207ENST00000479615 SPATA31E1Q6ZUB1 1445 aa22.24■■□□□ 1.15
PRKN-207ENST00000479615 PRAG1Q86YV5 1406 aa22.24■■□□□ 1.15
PRKN-207ENST00000479615 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.24■■□□□ 1.15
PRKN-207ENST00000479615 RGL3Q3MIN7 710 aa22.24■■□□□ 1.15
PRKN-207ENST00000479615 JCADQ9P266 1359 aa22.24■■□□□ 1.15
PRKN-207ENST00000479615 ADGRL3Q9HAR2 1447 aa22.22■■□□□ 1.15
PRKN-207ENST00000479615 PPLO60437 1756 aa22.2■■□□□ 1.14
PRKN-207ENST00000479615 BRINP3Q76B58 766 aa22.19■■□□□ 1.14
PRKN-207ENST00000479615 ADGRF5Q8IZF2 1346 aa22.18■■□□□ 1.14
PRKN-207ENST00000479615 SPATA31A6Q5VVP1 1343 aa22.17■■□□□ 1.14
PRKN-207ENST00000479615 PHLPP1O60346 1717 aa22.17■■□□□ 1.14
PRKN-207ENST00000479615 MST1RQ04912 1400 aa22.16■■□□□ 1.14
PRKN-207ENST00000479615 AHDC1Q5TGY3 1603 aaPredicted RBP22.16■■□□□ 1.14
PRKN-207ENST00000479615 ROBO2Q9HCK4 1378 aa22.15■■□□□ 1.14
PRKN-207ENST00000479615 STAC3Q96MF2 364 aa22.13■■□□□ 1.13
PRKN-207ENST00000479615 SETD1AO15047 1707 aaKnown RBP22.13■■□□□ 1.13
PRKN-207ENST00000479615 PIK3C2GO75747 1445 aa22.12■■□□□ 1.13
PRKN-207ENST00000479615 ABCC11Q96J66 1382 aa22.12■■□□□ 1.13
PRKN-207ENST00000479615 COL16A1Q07092 1604 aaPredicted RBP22.11■■□□□ 1.13
PRKN-207ENST00000479615 LRRC59Q96AG4 307 aaKnown RBP22.11■■□□□ 1.13
PRKN-207ENST00000479615 LRPPRCP42704 1394 aaKnown RBP22.11■■□□□ 1.13
PRKN-207ENST00000479615 ASXL1Q8IXJ9 1541 aa22.11■■□□□ 1.13
PRKN-207ENST00000479615 TECPR2O15040 1411 aa22.1■■□□□ 1.13
PRKN-207ENST00000479615 SIRT1Q96EB6 747 aa22.1■■□□□ 1.13
PRKN-207ENST00000479615 C14orf93Q9H972 538 aaKnown RBP22.1■■□□□ 1.13
PRKN-207ENST00000479615 RGS17Q9UGC6 210 aaPredicted RBP22.08■■□□□ 1.13
PRKN-207ENST00000479615 MYOM2P54296 1465 aa22.08■■□□□ 1.12
PRKN-207ENST00000479615 C1orf167Q5SNV9 1468 aa22.08■■□□□ 1.12
PRKN-207ENST00000479615 IFT172Q9UG01 1749 aa22.06■■□□□ 1.12
PRKN-207ENST00000479615 NRXN1Q9ULB1 1477 aa22.06■■□□□ 1.12
PRKN-207ENST00000479615 DHX57Q6P158 1386 aaKnown RBP22.05■■□□□ 1.12
PRKN-207ENST00000479615 STK26Q9P289 416 aa22.05■■□□□ 1.12
PRKN-207ENST00000479615 NALCNQ8IZF0 1738 aa22.05■■□□□ 1.12
PRKN-207ENST00000479615 TMEM132EQ6IEE7 984 aa22.04■■□□□ 1.12
PRKN-207ENST00000479615 MEX3CQ5U5Q3 659 aaKnown RBP22.03■■□□□ 1.12
PRKN-207ENST00000479615 YTHDC2Q9H6S0 1430 aaKnown RBP22.03■■□□□ 1.12
PRKN-207ENST00000479615 ZNF772Q68DY9 489 aaPredicted RBP22.01■■□□□ 1.11
PRKN-207ENST00000479615 SHPRHQ149N8 1683 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 305.7 ms