RNA–Protein interactions for RNA: ENST00000478997.3

RN7SL549P-201, Transcript of RNA, 7SL, cytoplasmic 549, pseudogene, humanhuman

BASIC

Gene RN7SL549P, Length 282 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL549P-201ENST00000478997 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.51□□□□□ -0.57
RN7SL549P-201ENST00000478997 NKTRP30414 1462 aaKnown RBP11.51□□□□□ -0.57
RN7SL549P-201ENST00000478997 DIP2AQ14689 1571 aa11.5□□□□□ -0.57
RN7SL549P-201ENST00000478997 CLTCL1P53675 1640 aa11.5□□□□□ -0.57
RN7SL549P-201ENST00000478997 ALKQ9UM73 1620 aa11.5□□□□□ -0.57
RN7SL549P-201ENST00000478997 UBAP1LF5GYI3 381 aa11.5□□□□□ -0.57
RN7SL549P-201ENST00000478997 XIRP1Q702N8 1843 aaKnown RBP11.49□□□□□ -0.57
RN7SL549P-201ENST00000478997 ACIN1Q9UKV3 1341 aaKnown RBP11.49□□□□□ -0.57
RN7SL549P-201ENST00000478997 TOM1O60784 492 aa11.48□□□□□ -0.57
RN7SL549P-201ENST00000478997 KCNA6P17658 529 aa11.48□□□□□ -0.57
RN7SL549P-201ENST00000478997 ADAMTS13Q76LX8 1427 aa11.48□□□□□ -0.57
RN7SL549P-201ENST00000478997 CHD2O14647 1828 aaKnown RBP11.47□□□□□ -0.57
RN7SL549P-201ENST00000478997 KIF1BO60333 1816 aa11.47□□□□□ -0.57
RN7SL549P-201ENST00000478997 SETBP1Q9Y6X0 1596 aa11.47□□□□□ -0.57
RN7SL549P-201ENST00000478997 PIK3R4Q99570 1358 aa11.47□□□□□ -0.57
RN7SL549P-201ENST00000478997 PPP1R15AO75807 674 aaPredicted RBP11.47□□□□□ -0.57
RN7SL549P-201ENST00000478997 SLC26A8Q96RN1 970 aa11.47□□□□□ -0.57
RN7SL549P-201ENST00000478997 TBX22Q9Y458 520 aa11.47□□□□□ -0.57
RN7SL549P-201ENST00000478997 NEXMIFQ5QGS0 1516 aa11.46□□□□□ -0.57
RN7SL549P-201ENST00000478997 CHGAP10645 457 aaKnown RBP11.46□□□□□ -0.57
RN7SL549P-201ENST00000478997 TRIM52Q96A61 297 aa11.46□□□□□ -0.57
RN7SL549P-201ENST00000478997 SLC4A1APQ9BWU0 796 aaKnown RBP11.46□□□□□ -0.57
RN7SL549P-201ENST00000478997 NRXN3Q9Y4C0 1643 aa11.46□□□□□ -0.58
RN7SL549P-201ENST00000478997 SETD5Q9C0A6 1442 aa11.44□□□□□ -0.58
RN7SL549P-201ENST00000478997 TMEM94Q12767 1356 aa11.43□□□□□ -0.58
RN7SL549P-201ENST00000478997 NCOA3Q9Y6Q9 1424 aa11.43□□□□□ -0.58
RN7SL549P-201ENST00000478997 BCANQ96GW7 911 aa11.42□□□□□ -0.58
RN7SL549P-201ENST00000478997 XRN1Q8IZH2 1706 aaKnown RBP11.41□□□□□ -0.58
RN7SL549P-201ENST00000478997 RPGRIP1LQ68CZ1 1315 aa11.4□□□□□ -0.58
RN7SL549P-201ENST00000478997 PIP4K2BP78356 416 aa11.4□□□□□ -0.58
RN7SL549P-201ENST00000478997 ZNF326Q5BKZ1 582 aaKnown RBP11.4□□□□□ -0.58
RN7SL549P-201ENST00000478997 MPHOSPH9Q99550 1183 aa11.4□□□□□ -0.58
RN7SL549P-201ENST00000478997 PPLO60437 1756 aa11.4□□□□□ -0.58
RN7SL549P-201ENST00000478997 CCDC144AA2RUR9 1427 aa11.39□□□□□ -0.59
RN7SL549P-201ENST00000478997 FAM135BQ49AJ0 1406 aa11.39□□□□□ -0.59
RN7SL549P-201ENST00000478997 NUTM2DQ5VT03 806 aaPredicted RBP11.39□□□□□ -0.59
RN7SL549P-201ENST00000478997 PROSER2Q86WR7 435 aaPredicted RBP11.39□□□□□ -0.59
RN7SL549P-201ENST00000478997 PTPRUQ92729 1446 aa11.39□□□□□ -0.59
RN7SL549P-201ENST00000478997 RAB3GAP2Q9H2M9 1393 aa11.39□□□□□ -0.59
RN7SL549P-201ENST00000478997 SETD1AO15047 1707 aaKnown RBP11.38□□□□□ -0.59
RN7SL549P-201ENST00000478997 SPATA31E1Q6ZUB1 1445 aa11.38□□□□□ -0.59
RN7SL549P-201ENST00000478997 PRAG1Q86YV5 1406 aa11.38□□□□□ -0.59
RN7SL549P-201ENST00000478997 MSH6P52701 1360 aa11.38□□□□□ -0.59
RN7SL549P-201ENST00000478997 SCAF1Q9H7N4 1312 aaKnown RBP11.37□□□□□ -0.59
RN7SL549P-201ENST00000478997 HRCP23327 699 aa11.37□□□□□ -0.59
RN7SL549P-201ENST00000478997 HSPA1LP34931 641 aa11.37□□□□□ -0.59
RN7SL549P-201ENST00000478997 IFT172Q9UG01 1749 aa11.37□□□□□ -0.59
RN7SL549P-201ENST00000478997 VGFO15240 615 aaPredicted RBP11.36□□□□□ -0.59
RN7SL549P-201ENST00000478997 FOXD1Q16676 465 aa11.36□□□□□ -0.59
RN7SL549P-201ENST00000478997 METP08581 1390 aa11.36□□□□□ -0.59
RN7SL549P-201ENST00000478997 DCCP43146 1447 aa11.35□□□□□ -0.59
RN7SL549P-201ENST00000478997 SENP3Q9H4L4 574 aaPredicted RBP11.35□□□□□ -0.59
RN7SL549P-201ENST00000478997 AMOTL2Q9Y2J4 779 aa11.35□□□□□ -0.59
RN7SL549P-201ENST00000478997 ROBO1Q9Y6N7 1651 aa11.34□□□□□ -0.59
RN7SL549P-201ENST00000478997 ANKRD30BQ9BXX2 1392 aa11.34□□□□□ -0.59
RN7SL549P-201ENST00000478997 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.34□□□□□ -0.59
RN7SL549P-201ENST00000478997 PTCH1Q13635 1447 aa11.34□□□□□ -0.59
RN7SL549P-201ENST00000478997 RBM33Q96EV2 1170 aaKnown RBP11.33□□□□□ -0.6
RN7SL549P-201ENST00000478997 DISP3Q9P2K9 1392 aa11.32□□□□□ -0.6
RN7SL549P-201ENST00000478997 C19orf44Q9H6X5 657 aa11.32□□□□□ -0.6
RN7SL549P-201ENST00000478997 MED1Q15648 1581 aaPredicted RBP11.32□□□□□ -0.6
RN7SL549P-201ENST00000478997 CADPS2Q86UW7 1296 aa11.31□□□□□ -0.6
RN7SL549P-201ENST00000478997 ADGRL3Q9HAR2 1447 aa11.31□□□□□ -0.6
RN7SL549P-201ENST00000478997 MYOM2P54296 1465 aa11.31□□□□□ -0.6
RN7SL549P-201ENST00000478997 NRXN1Q9ULB1 1477 aa11.31□□□□□ -0.6
RN7SL549P-201ENST00000478997 PIK3C2GO75747 1445 aa11.3□□□□□ -0.6
RN7SL549P-201ENST00000478997 SLAIN2Q9P270 581 aa11.3□□□□□ -0.6
RN7SL549P-201ENST00000478997 NALCNQ8IZF0 1738 aa11.29□□□□□ -0.6
RN7SL549P-201ENST00000478997 TECPR2O15040 1411 aa11.29□□□□□ -0.6
RN7SL549P-201ENST00000478997 ADGRF5Q8IZF2 1346 aa11.29□□□□□ -0.6
RN7SL549P-201ENST00000478997 LAMC1P11047 1609 aa11.28□□□□□ -0.6
RN7SL549P-201ENST00000478997 AHDC1Q5TGY3 1603 aaPredicted RBP11.28□□□□□ -0.6
RN7SL549P-201ENST00000478997 C14orf37Q86TY3 774 aa11.28□□□□□ -0.6
RN7SL549P-201ENST00000478997 KNDC1Q76NI1 1749 aa11.28□□□□□ -0.6
RN7SL549P-201ENST00000478997 ASXL1Q8IXJ9 1541 aa11.28□□□□□ -0.6
RN7SL549P-201ENST00000478997 MST1RQ04912 1400 aa11.27□□□□□ -0.6
RN7SL549P-201ENST00000478997 ATF3P18847 181 aa11.27□□□□□ -0.61
RN7SL549P-201ENST00000478997 COL16A1Q07092 1604 aaPredicted RBP11.27□□□□□ -0.61
RN7SL549P-201ENST00000478997 ROBO2Q9HCK4 1378 aa11.27□□□□□ -0.61
RN7SL549P-201ENST00000478997 PHLPP1O60346 1717 aa11.26□□□□□ -0.61
RN7SL549P-201ENST00000478997 RGL3Q3MIN7 710 aa11.26□□□□□ -0.61
RN7SL549P-201ENST00000478997 LRPPRCP42704 1394 aaKnown RBP11.25□□□□□ -0.61
RN7SL549P-201ENST00000478997 ABCC11Q96J66 1382 aa11.25□□□□□ -0.61
RN7SL549P-201ENST00000478997 CDC42BPGQ6DT37 1551 aa11.24□□□□□ -0.61
RN7SL549P-201ENST00000478997 NHSL1Q5SYE7 1610 aa11.24□□□□□ -0.61
RN7SL549P-201ENST00000478997 BRINP3Q76B58 766 aa11.23□□□□□ -0.61
RN7SL549P-201ENST00000478997 STAC3Q96MF2 364 aa11.23□□□□□ -0.61
RN7SL549P-201ENST00000478997 C14orf93Q9H972 538 aaKnown RBP11.23□□□□□ -0.61
RN7SL549P-201ENST00000478997 JCADQ9P266 1359 aa11.23□□□□□ -0.61
RN7SL549P-201ENST00000478997 ILDR2Q71H61 639 aa11.22□□□□□ -0.61
RN7SL549P-201ENST00000478997 YTHDC2Q9H6S0 1430 aaKnown RBP11.22□□□□□ -0.61
RN7SL549P-201ENST00000478997 SHPRHQ149N8 1683 aa11.21□□□□□ -0.61
RN7SL549P-201ENST00000478997 C1orf167Q5SNV9 1468 aa11.21□□□□□ -0.61
RN7SL549P-201ENST00000478997 SIRT1Q96EB6 747 aa11.21□□□□□ -0.61
RN7SL549P-201ENST00000478997 ADGRB1O14514 1584 aa11.2□□□□□ -0.62
RN7SL549P-201ENST00000478997 DLC1Q96QB1 1528 aa11.2□□□□□ -0.62
RN7SL549P-201ENST00000478997 DHX57Q6P158 1386 aaKnown RBP11.19□□□□□ -0.62
RN7SL549P-201ENST00000478997 SPATA31A6Q5VVP1 1343 aa11.18□□□□□ -0.62
RN7SL549P-201ENST00000478997 CFAP70Q5T0N1 1121 aa11.18□□□□□ -0.62
RN7SL549P-201ENST00000478997 TMEM132EQ6IEE7 984 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms