RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 NPM2Q86SE8 214 aaKnown RBP14.35□□□□□ -0.11
VPS52-217ENST00000478934 BLMP54132 1417 aaPredicted RBP14.35□□□□□ -0.11
VPS52-217ENST00000478934 SPHKAPQ2M3C7 1700 aa14.35□□□□□ -0.11
VPS52-217ENST00000478934 GGT6Q6P531 493 aa14.35□□□□□ -0.11
VPS52-217ENST00000478934 PLEKHH1Q9ULM0 1364 aa14.34□□□□□ -0.11
VPS52-217ENST00000478934 PDE3BQ13370 1112 aa14.34□□□□□ -0.11
VPS52-217ENST00000478934 NUTM2DQ5VT03 806 aaPredicted RBP14.34□□□□□ -0.11
VPS52-217ENST00000478934 NOP58Q9Y2X3 529 aaKnown RBP14.34□□□□□ -0.11
VPS52-217ENST00000478934 CARD14Q9BXL6 1004 aa14.33□□□□□ -0.11
VPS52-217ENST00000478934 WDR43Q15061 677 aaKnown RBP eCLIP14.33□□□□□ -0.12
VPS52-217ENST00000478934 CRBNQ96SW2 442 aa14.33□□□□□ -0.12
VPS52-217ENST00000478934 INO80Q9ULG1 1556 aaPredicted RBP14.33□□□□□ -0.12
VPS52-217ENST00000478934 IQGAP1P46940 1657 aa14.33□□□□□ -0.12
VPS52-217ENST00000478934 ABCA9Q8IUA7 1624 aa14.33□□□□□ -0.12
VPS52-217ENST00000478934 DEPDC5O75140 1603 aa14.32□□□□□ -0.12
VPS52-217ENST00000478934 TMEM132EQ6IEE7 984 aa14.31□□□□□ -0.12
VPS52-217ENST00000478934 CEP152O94986 1710 aa14.31□□□□□ -0.12
VPS52-217ENST00000478934 ARAP3Q8WWN8 1544 aa14.31□□□□□ -0.12
VPS52-217ENST00000478934 MROH1Q8NDA8 1641 aa14.31□□□□□ -0.12
VPS52-217ENST00000478934 TRAK1Q9UPV9 953 aa14.31□□□□□ -0.12
VPS52-217ENST00000478934 TET3O43151 1660 aa14.31□□□□□ -0.12
VPS52-217ENST00000478934 VWDEQ8N2E2 1590 aa14.3□□□□□ -0.12
VPS52-217ENST00000478934 SPINK5Q9NQ38 1064 aaPredicted RBP14.3□□□□□ -0.12
VPS52-217ENST00000478934 TNNT2P45379 298 aaPredicted RBP14.29□□□□□ -0.12
VPS52-217ENST00000478934 CDCA8Q53HL2 280 aa14.29□□□□□ -0.12
VPS52-217ENST00000478934 RAPGEF3O95398 923 aa14.28□□□□□ -0.12
VPS52-217ENST00000478934 CFAP65Q6ZU64 1925 aaKnown RBP14.28□□□□□ -0.12
VPS52-217ENST00000478934 ANP32AP39687 249 aaKnown RBP14.28□□□□□ -0.12
VPS52-217ENST00000478934 DUSP27Q5VZP5 1158 aa14.28□□□□□ -0.12
VPS52-217ENST00000478934 NOS1P29475 1434 aa14.28□□□□□ -0.12
VPS52-217ENST00000478934 ERVK-7P63135 1459 aa14.27□□□□□ -0.12
VPS52-217ENST00000478934 APAF1O14727 1248 aa14.27□□□□□ -0.13
VPS52-217ENST00000478934 NPM1P06748 294 aaKnown RBP eCLIP14.27□□□□□ -0.13
VPS52-217ENST00000478934 DMRT2Q9Y5R5 561 aa14.27□□□□□ -0.13
VPS52-217ENST00000478934 KIDINS220Q9ULH0 1771 aa14.27□□□□□ -0.13
VPS52-217ENST00000478934 ZMYM4Q5VZL5 1548 aa14.27□□□□□ -0.13
VPS52-217ENST00000478934 ASXL1Q8IXJ9 1541 aa14.27□□□□□ -0.13
VPS52-217ENST00000478934 EIF3AQ14152 1382 aaKnown RBP14.26□□□□□ -0.13
VPS52-217ENST00000478934 ABCA6Q8N139 1617 aa14.26□□□□□ -0.13
VPS52-217ENST00000478934 SLC12A5Q9H2X9 1139 aa14.26□□□□□ -0.13
VPS52-217ENST00000478934 MYOM1P52179 1685 aa14.25□□□□□ -0.13
VPS52-217ENST00000478934 STAC3Q96MF2 364 aa14.25□□□□□ -0.13
VPS52-217ENST00000478934 IPO9Q96P70 1041 aaKnown RBP14.25□□□□□ -0.13
VPS52-217ENST00000478934 PPRC1Q5VV67 1664 aaKnown RBP14.25□□□□□ -0.13
VPS52-217ENST00000478934 MROH2AA6NES4 1674 aa14.25□□□□□ -0.13
VPS52-217ENST00000478934 SYNMO15061 1565 aa14.24□□□□□ -0.13
VPS52-217ENST00000478934 ZNF521Q96K83 1311 aa14.24□□□□□ -0.13
VPS52-217ENST00000478934 CD109Q6YHK3 1445 aa14.24□□□□□ -0.13
VPS52-217ENST00000478934 GOLGA2Q08379 1002 aa14.24□□□□□ -0.13
VPS52-217ENST00000478934 OSCARQ8IYS5 282 aa14.24□□□□□ -0.13
VPS52-217ENST00000478934 MAP3K4Q9Y6R4 1608 aa14.23□□□□□ -0.13
VPS52-217ENST00000478934 EFCAB6Q5THR3 1501 aa14.23□□□□□ -0.13
VPS52-217ENST00000478934 DEKP35659 375 aaKnown RBP14.23□□□□□ -0.13
VPS52-217ENST00000478934 NPATQ14207 1427 aa14.23□□□□□ -0.13
VPS52-217ENST00000478934 ZBTB47Q9UFB7 747 aaPredicted RBP14.23□□□□□ -0.13
VPS52-217ENST00000478934 PDE4AP27815 886 aa14.22□□□□□ -0.13
VPS52-217ENST00000478934 SAFB2Q14151 953 aaKnown RBP eCLIP14.22□□□□□ -0.13
VPS52-217ENST00000478934 CENPJQ9HC77 1338 aaPredicted RBP14.21□□□□□ -0.13
VPS52-217ENST00000478934 ZNF518AQ6AHZ1 1483 aa14.21□□□□□ -0.13
VPS52-217ENST00000478934 SLFN5Q08AF3 891 aa14.21□□□□□ -0.13
VPS52-217ENST00000478934 INSRP06213 1382 aa14.21□□□□□ -0.13
VPS52-217ENST00000478934 MYOM2P54296 1465 aa14.2□□□□□ -0.14
VPS52-217ENST00000478934 BCAR3O75815 825 aa14.2□□□□□ -0.14
VPS52-217ENST00000478934 NEUROD2Q15784 382 aa14.2□□□□□ -0.14
VPS52-217ENST00000478934 PIK3C2GO75747 1445 aa14.2□□□□□ -0.14
VPS52-217ENST00000478934 RRP7AQ9Y3A4 280 aaKnown RBP14.2□□□□□ -0.14
VPS52-217ENST00000478934 FRMPD1Q5SYB0 1578 aa14.19□□□□□ -0.14
VPS52-217ENST00000478934 KDM5AP29375 1690 aaKnown RBP14.19□□□□□ -0.14
VPS52-217ENST00000478934 C14orf93Q9H972 538 aaKnown RBP14.19□□□□□ -0.14
VPS52-217ENST00000478934 KIF1BO60333 1816 aa14.18□□□□□ -0.14
VPS52-217ENST00000478934 TCERG1O14776 1098 aaKnown RBP14.18□□□□□ -0.14
VPS52-217ENST00000478934 LAS1LQ9Y4W2 734 aaKnown RBP14.18□□□□□ -0.14
VPS52-217ENST00000478934 POGZQ7Z3K3 1410 aa14.18□□□□□ -0.14
VPS52-217ENST00000478934 MORC1Q86VD1 984 aa14.17□□□□□ -0.14
VPS52-217ENST00000478934 BACH2Q9BYV9 841 aa14.17□□□□□ -0.14
VPS52-217ENST00000478934 NSD3Q9BZ95 1437 aa14.17□□□□□ -0.14
VPS52-217ENST00000478934 NPC1L1Q9UHC9 1359 aa14.16□□□□□ -0.14
VPS52-217ENST00000478934 STK26Q9P289 416 aa14.16□□□□□ -0.14
VPS52-217ENST00000478934 NRXN1Q9ULB1 1477 aa14.16□□□□□ -0.14
VPS52-217ENST00000478934 KIAA1210Q9ULL0 1709 aa14.16□□□□□ -0.14
VPS52-217ENST00000478934 TRMT2AQ8IZ69 625 aaKnown RBP14.15□□□□□ -0.14
VPS52-217ENST00000478934 ADGRB3O60242 1522 aa14.15□□□□□ -0.14
VPS52-217ENST00000478934 CABP2Q9NPB3 220 aa14.15□□□□□ -0.14
VPS52-217ENST00000478934 IFT172Q9UG01 1749 aa14.14□□□□□ -0.15
VPS52-217ENST00000478934 LMTK2Q8IWU2 1503 aa14.14□□□□□ -0.15
VPS52-217ENST00000478934 IDI1Q13907 227 aa14.13□□□□□ -0.15
VPS52-217ENST00000478934 KDM2BQ8NHM5 1336 aa14.13□□□□□ -0.15
VPS52-217ENST00000478934 MTHFSP49914 203 aa14.12□□□□□ -0.15
VPS52-217ENST00000478934 MLH3Q9UHC1 1453 aa14.12□□□□□ -0.15
VPS52-217ENST00000478934 ADGRB1O14514 1584 aa14.12□□□□□ -0.15
VPS52-217ENST00000478934 NEURL4Q96JN8 1562 aa14.12□□□□□ -0.15
VPS52-217ENST00000478934 WWC1Q8IX03 1113 aa14.11□□□□□ -0.15
VPS52-217ENST00000478934 ABCC3O15438 1527 aa14.11□□□□□ -0.15
VPS52-217ENST00000478934 SLC4A3P48751 1232 aa14.11□□□□□ -0.15
VPS52-217ENST00000478934 RGS3P49796 1198 aa14.1□□□□□ -0.15
VPS52-217ENST00000478934 MS4A1P11836 297 aa14.1□□□□□ -0.15
VPS52-217ENST00000478934 FBXO31Q5XUX0 539 aaPredicted RBP14.1□□□□□ -0.15
VPS52-217ENST00000478934 TNNQ9UQP3 1299 aa14.1□□□□□ -0.15
VPS52-217ENST00000478934 SIGLEC1Q9BZZ2 1709 aa14.09□□□□□ -0.15
VPS52-217ENST00000478934 YEATS2Q9ULM3 1422 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms