RNA–Protein interactions for RNA: ENST00000478541.1

CYTH3-206, Transcript of cytohesin 3, humanhuman

TSL 2

Gene CYTH3, Length 505 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-206ENST00000478541 CHGAP10645 457 aaKnown RBP24.04■■□□□ 1.44
CYTH3-206ENST00000478541 TRIM52Q96A61 297 aa24.04■■□□□ 1.44
CYTH3-206ENST00000478541 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.03■■□□□ 1.44
CYTH3-206ENST00000478541 CLTCL1P53675 1640 aa24.02■■□□□ 1.44
CYTH3-206ENST00000478541 SLC26A8Q96RN1 970 aa24■■□□□ 1.43
CYTH3-206ENST00000478541 KIF1BO60333 1816 aa24■■□□□ 1.43
CYTH3-206ENST00000478541 XIRP1Q702N8 1843 aaKnown RBP24■■□□□ 1.43
CYTH3-206ENST00000478541 NWD1Q149M9 1564 aa23.99■■□□□ 1.43
CYTH3-206ENST00000478541 PPP1R15AO75807 674 aaPredicted RBP23.99■■□□□ 1.43
CYTH3-206ENST00000478541 SLC4A1APQ9BWU0 796 aaKnown RBP23.99■■□□□ 1.43
CYTH3-206ENST00000478541 CHD2O14647 1828 aaKnown RBP23.97■■□□□ 1.43
CYTH3-206ENST00000478541 TOM1O60784 492 aa23.97■■□□□ 1.43
CYTH3-206ENST00000478541 KCNA6P17658 529 aa23.97■■□□□ 1.43
CYTH3-206ENST00000478541 ACIN1Q9UKV3 1341 aaKnown RBP23.97■■□□□ 1.43
CYTH3-206ENST00000478541 DIP2AQ14689 1571 aa23.96■■□□□ 1.43
CYTH3-206ENST00000478541 ALKQ9UM73 1620 aa23.95■■□□□ 1.43
CYTH3-206ENST00000478541 BCANQ96GW7 911 aa23.95■■□□□ 1.42
CYTH3-206ENST00000478541 NKTRP30414 1462 aaKnown RBP23.94■■□□□ 1.42
CYTH3-206ENST00000478541 TBX22Q9Y458 520 aa23.94■■□□□ 1.42
CYTH3-206ENST00000478541 SETD5Q9C0A6 1442 aa23.93■■□□□ 1.42
CYTH3-206ENST00000478541 ADAMTS13Q76LX8 1427 aa23.93■■□□□ 1.42
CYTH3-206ENST00000478541 NEXMIFQ5QGS0 1516 aa23.9■■□□□ 1.42
CYTH3-206ENST00000478541 NUTM2DQ5VT03 806 aaPredicted RBP23.9■■□□□ 1.42
CYTH3-206ENST00000478541 SETBP1Q9Y6X0 1596 aa23.9■■□□□ 1.42
CYTH3-206ENST00000478541 NRXN3Q9Y4C0 1643 aa23.89■■□□□ 1.42
CYTH3-206ENST00000478541 PIK3R4Q99570 1358 aa23.89■■□□□ 1.41
CYTH3-206ENST00000478541 ZNF326Q5BKZ1 582 aaKnown RBP23.88■■□□□ 1.41
CYTH3-206ENST00000478541 TMEM94Q12767 1356 aa23.88■■□□□ 1.41
CYTH3-206ENST00000478541 MPHOSPH9Q99550 1183 aa23.87■■□□□ 1.41
CYTH3-206ENST00000478541 SENP3Q9H4L4 574 aaPredicted RBP23.86■■□□□ 1.41
CYTH3-206ENST00000478541 PIP4K2BP78356 416 aa23.85■■□□□ 1.41
CYTH3-206ENST00000478541 PROSER2Q86WR7 435 aaPredicted RBP23.85■■□□□ 1.41
CYTH3-206ENST00000478541 RAB3GAP2Q9H2M9 1393 aa23.83■■□□□ 1.41
CYTH3-206ENST00000478541 SCAF1Q9H7N4 1312 aaKnown RBP23.83■■□□□ 1.4
CYTH3-206ENST00000478541 FOXD1Q16676 465 aa23.82■■□□□ 1.4
CYTH3-206ENST00000478541 PPLO60437 1756 aa23.81■■□□□ 1.4
CYTH3-206ENST00000478541 CCDC144AA2RUR9 1427 aa23.81■■□□□ 1.4
CYTH3-206ENST00000478541 RPGRIP1LQ68CZ1 1315 aa23.81■■□□□ 1.4
CYTH3-206ENST00000478541 NCOA3Q9Y6Q9 1424 aa23.8■■□□□ 1.4
CYTH3-206ENST00000478541 XRN1Q8IZH2 1706 aaKnown RBP23.78■■□□□ 1.4
CYTH3-206ENST00000478541 PTPRUQ92729 1446 aa23.76■■□□□ 1.39
CYTH3-206ENST00000478541 VGFO15240 615 aaPredicted RBP23.76■■□□□ 1.39
CYTH3-206ENST00000478541 HSPA1LP34931 641 aa23.76■■□□□ 1.39
CYTH3-206ENST00000478541 HRCP23327 699 aa23.75■■□□□ 1.39
CYTH3-206ENST00000478541 RBM33Q96EV2 1170 aaKnown RBP23.75■■□□□ 1.39
CYTH3-206ENST00000478541 SETD1AO15047 1707 aaKnown RBP23.75■■□□□ 1.39
CYTH3-206ENST00000478541 MSH6P52701 1360 aa23.75■■□□□ 1.39
CYTH3-206ENST00000478541 SPATA31E1Q6ZUB1 1445 aa23.75■■□□□ 1.39
CYTH3-206ENST00000478541 IFT172Q9UG01 1749 aa23.74■■□□□ 1.39
CYTH3-206ENST00000478541 AMOTL2Q9Y2J4 779 aa23.74■■□□□ 1.39
CYTH3-206ENST00000478541 METP08581 1390 aa23.72■■□□□ 1.39
CYTH3-206ENST00000478541 FAM135BQ49AJ0 1406 aa23.72■■□□□ 1.39
CYTH3-206ENST00000478541 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.69■■□□□ 1.38
CYTH3-206ENST00000478541 ROBO1Q9Y6N7 1651 aa23.69■■□□□ 1.38
CYTH3-206ENST00000478541 ANKRD30BQ9BXX2 1392 aa23.66■■□□□ 1.38
CYTH3-206ENST00000478541 C19orf44Q9H6X5 657 aa23.65■■□□□ 1.38
CYTH3-206ENST00000478541 PRAG1Q86YV5 1406 aa23.64■■□□□ 1.37
CYTH3-206ENST00000478541 RGL3Q3MIN7 710 aa23.63■■□□□ 1.37
CYTH3-206ENST00000478541 C14orf37Q86TY3 774 aa23.63■■□□□ 1.37
CYTH3-206ENST00000478541 SLAIN2Q9P270 581 aa23.63■■□□□ 1.37
CYTH3-206ENST00000478541 DISP3Q9P2K9 1392 aa23.63■■□□□ 1.37
CYTH3-206ENST00000478541 DCCP43146 1447 aa23.62■■□□□ 1.37
CYTH3-206ENST00000478541 PTCH1Q13635 1447 aa23.61■■□□□ 1.37
CYTH3-206ENST00000478541 CADPS2Q86UW7 1296 aa23.61■■□□□ 1.37
CYTH3-206ENST00000478541 ADGRF5Q8IZF2 1346 aa23.6■■□□□ 1.37
CYTH3-206ENST00000478541 ATF3P18847 181 aa23.58■■□□□ 1.37
CYTH3-206ENST00000478541 NALCNQ8IZF0 1738 aa23.58■■□□□ 1.37
CYTH3-206ENST00000478541 PIK3C2GO75747 1445 aa23.58■■□□□ 1.36
CYTH3-206ENST00000478541 MED1Q15648 1581 aaPredicted RBP23.57■■□□□ 1.36
CYTH3-206ENST00000478541 ADGRL3Q9HAR2 1447 aa23.57■■□□□ 1.36
CYTH3-206ENST00000478541 MYOM2P54296 1465 aa23.56■■□□□ 1.36
CYTH3-206ENST00000478541 NRXN1Q9ULB1 1477 aa23.56■■□□□ 1.36
CYTH3-206ENST00000478541 ROBO2Q9HCK4 1378 aa23.53■■□□□ 1.36
CYTH3-206ENST00000478541 PHLPP1O60346 1717 aa23.53■■□□□ 1.36
CYTH3-206ENST00000478541 LAMC1P11047 1609 aa23.52■■□□□ 1.36
CYTH3-206ENST00000478541 KNDC1Q76NI1 1749 aa23.52■■□□□ 1.36
CYTH3-206ENST00000478541 ASXL1Q8IXJ9 1541 aa23.51■■□□□ 1.35
CYTH3-206ENST00000478541 TECPR2O15040 1411 aa23.5■■□□□ 1.35
CYTH3-206ENST00000478541 MST1RQ04912 1400 aa23.5■■□□□ 1.35
CYTH3-206ENST00000478541 AHDC1Q5TGY3 1603 aaPredicted RBP23.49■■□□□ 1.35
CYTH3-206ENST00000478541 COL16A1Q07092 1604 aaPredicted RBP23.48■■□□□ 1.35
CYTH3-206ENST00000478541 C14orf93Q9H972 538 aaKnown RBP23.47■■□□□ 1.35
CYTH3-206ENST00000478541 LRPPRCP42704 1394 aaKnown RBP23.47■■□□□ 1.35
CYTH3-206ENST00000478541 ABCC11Q96J66 1382 aa23.46■■□□□ 1.35
CYTH3-206ENST00000478541 BRINP3Q76B58 766 aa23.44■■□□□ 1.34
CYTH3-206ENST00000478541 YTHDC2Q9H6S0 1430 aaKnown RBP23.43■■□□□ 1.34
CYTH3-206ENST00000478541 TMEM132EQ6IEE7 984 aa23.43■■□□□ 1.34
CYTH3-206ENST00000478541 STAC3Q96MF2 364 aa23.43■■□□□ 1.34
CYTH3-206ENST00000478541 NHSL1Q5SYE7 1610 aa23.43■■□□□ 1.34
CYTH3-206ENST00000478541 CDC42BPGQ6DT37 1551 aa23.42■■□□□ 1.34
CYTH3-206ENST00000478541 ILDR2Q71H61 639 aa23.41■■□□□ 1.34
CYTH3-206ENST00000478541 JCADQ9P266 1359 aa23.4■■□□□ 1.34
CYTH3-206ENST00000478541 CFAP70Q5T0N1 1121 aa23.4■■□□□ 1.34
CYTH3-206ENST00000478541 C1orf167Q5SNV9 1468 aa23.4■■□□□ 1.34
CYTH3-206ENST00000478541 SIRT1Q96EB6 747 aa23.39■■□□□ 1.33
CYTH3-206ENST00000478541 STK26Q9P289 416 aa23.39■■□□□ 1.33
CYTH3-206ENST00000478541 DHX57Q6P158 1386 aaKnown RBP23.39■■□□□ 1.33
CYTH3-206ENST00000478541 SHPRHQ149N8 1683 aa23.38■■□□□ 1.33
CYTH3-206ENST00000478541 DCAF11Q8TEB1 546 aa23.38■■□□□ 1.33
CYTH3-206ENST00000478541 ADGRB1O14514 1584 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms