RNA–Protein interactions for RNA: ENST00000477876.1

NUP58-210, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-210ENST00000477876 LRCH3Q96II8 777 aa10.89□□□□□ -0.67
NUP58-210ENST00000477876 EYA1Q99502 592 aa10.89□□□□□ -0.67
NUP58-210ENST00000477876 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.89□□□□□ -0.67
NUP58-210ENST00000477876 CADPSQ9ULU8 1353 aa10.89□□□□□ -0.67
NUP58-210ENST00000477876 HDGFP51858 240 aaKnown RBP10.88□□□□□ -0.67
NUP58-210ENST00000477876 GPIHBP1Q8IV16 184 aa10.88□□□□□ -0.67
NUP58-210ENST00000477876 PDS5BQ9NTI5 1447 aa10.87□□□□□ -0.67
NUP58-210ENST00000477876 GNPATO15228 680 aa10.87□□□□□ -0.67
NUP58-210ENST00000477876 SAMD7Q7Z3H4 446 aa10.87□□□□□ -0.67
NUP58-210ENST00000477876 ADGRG1Q9Y653 693 aa10.87□□□□□ -0.67
NUP58-210ENST00000477876 GPR37O15354 613 aa10.86□□□□□ -0.67
NUP58-210ENST00000477876 SLC24A1O60721 1099 aa10.86□□□□□ -0.67
NUP58-210ENST00000477876 RBM46Q8TBY0 533 aaKnown RBP10.86□□□□□ -0.67
NUP58-210ENST00000477876 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.85□□□□□ -0.67
NUP58-210ENST00000477876 TSR3Q9UJK0 312 aaKnown RBP10.85□□□□□ -0.67
NUP58-210ENST00000477876 FECHP22830 423 aa10.83□□□□□ -0.68
NUP58-210ENST00000477876 FAM161AQ3B820 660 aa10.83□□□□□ -0.68
NUP58-210ENST00000477876 WBP1LQ9NX94 342 aa10.83□□□□□ -0.68
NUP58-210ENST00000477876 HPS5Q9UPZ3 1129 aa10.83□□□□□ -0.68
NUP58-210ENST00000477876 OATP04181 439 aa10.82□□□□□ -0.68
NUP58-210ENST00000477876 NYAP1Q6ZVC0 841 aa10.82□□□□□ -0.68
NUP58-210ENST00000477876 PPP4CP60510 307 aa10.81□□□□□ -0.68
NUP58-210ENST00000477876 SWT1Q5T5J6 900 aaKnown RBP10.81□□□□□ -0.68
NUP58-210ENST00000477876 MRC2Q9UBG0 1479 aa10.81□□□□□ -0.68
NUP58-210ENST00000477876 DNAJB2P25686 324 aa10.8□□□□□ -0.68
NUP58-210ENST00000477876 RSF1Q96T23 1441 aaPredicted RBP10.79□□□□□ -0.68
NUP58-210ENST00000477876 RCCD1A6NED2 376 aa10.79□□□□□ -0.68
NUP58-210ENST00000477876 WDR62O43379 1518 aa10.79□□□□□ -0.68
NUP58-210ENST00000477876 SLC4A3P48751 1232 aa10.78□□□□□ -0.68
NUP58-210ENST00000477876 LMOD2Q6P5Q4 547 aa10.78□□□□□ -0.68
NUP58-210ENST00000477876 SLF2Q8IX21 1173 aa10.78□□□□□ -0.68
NUP58-210ENST00000477876 PXYLP1Q8TE99 480 aa10.78□□□□□ -0.68
NUP58-210ENST00000477876 RNF40O75150 1001 aa10.77□□□□□ -0.69
NUP58-210ENST00000477876 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.76□□□□□ -0.69
NUP58-210ENST00000477876 METTL3Q86U44 580 aaKnown RBP10.76□□□□□ -0.69
NUP58-210ENST00000477876 NECTIN2Q92692 538 aa10.76□□□□□ -0.69
NUP58-210ENST00000477876 TMEM134Q9H6X4 195 aa10.76□□□□□ -0.69
NUP58-210ENST00000477876 FANCD2Q9BXW9 1451 aa10.75□□□□□ -0.69
NUP58-210ENST00000477876 CFTRP13569 1480 aa10.74□□□□□ -0.69
NUP58-210ENST00000477876 IRX2Q9BZI1 471 aaPredicted RBP10.74□□□□□ -0.69
NUP58-210ENST00000477876 CEP164Q9UPV0 1460 aa10.73□□□□□ -0.69
NUP58-210ENST00000477876 RGS20O76081 388 aa10.72□□□□□ -0.69
NUP58-210ENST00000477876 MAP2K5Q13163 448 aa10.72□□□□□ -0.69
NUP58-210ENST00000477876 URB2Q14146 1524 aaKnown RBP10.71□□□□□ -0.69
NUP58-210ENST00000477876 MINK1Q8N4C8 1332 aaPredicted RBP10.7□□□□□ -0.7
NUP58-210ENST00000477876 IRF6O14896 467 aa10.7□□□□□ -0.7
NUP58-210ENST00000477876 IFFO2Q5TF58 517 aa10.7□□□□□ -0.7
NUP58-210ENST00000477876 TOP2AP11388 1531 aaKnown RBP10.69□□□□□ -0.7
NUP58-210ENST00000477876 ITGBL1O95965 494 aaPredicted RBP10.69□□□□□ -0.7
NUP58-210ENST00000477876 APLP1P51693 650 aa10.68□□□□□ -0.7
NUP58-210ENST00000477876 PHOX2BQ99453 314 aa10.68□□□□□ -0.7
NUP58-210ENST00000477876 ZC3H15Q8WU90 426 aaKnown RBP10.67□□□□□ -0.7
NUP58-210ENST00000477876 DAXXQ9UER7 740 aaPredicted RBP10.67□□□□□ -0.7
NUP58-210ENST00000477876 PRR14Q9BWN1 585 aa10.66□□□□□ -0.7
NUP58-210ENST00000477876 ZMYND10O75800 440 aa10.65□□□□□ -0.7
NUP58-210ENST00000477876 KCNC4Q03721 635 aa10.65□□□□□ -0.7
NUP58-210ENST00000477876 RSPH4AQ5TD94 716 aa10.65□□□□□ -0.7
NUP58-210ENST00000477876 CCDC88BA6NC98 1476 aa10.64□□□□□ -0.71
NUP58-210ENST00000477876 BARGINQ6ZT62 677 aa10.64□□□□□ -0.71
NUP58-210ENST00000477876 KRI1Q8N9T8 703 aaKnown RBP10.64□□□□□ -0.71
NUP58-210ENST00000477876 NLRP7Q8WX94 980 aa10.64□□□□□ -0.71
NUP58-210ENST00000477876 BCANQ96GW7 911 aa10.64□□□□□ -0.71
NUP58-210ENST00000477876 SLC10A3P09131 477 aa10.63□□□□□ -0.71
NUP58-210ENST00000477876 TJAP1Q5JTD0 557 aa10.63□□□□□ -0.71
NUP58-210ENST00000477876 CCDC102AQ96A19 550 aa10.62□□□□□ -0.71
NUP58-210ENST00000477876 MTRQ99707 1265 aa10.62□□□□□ -0.71
NUP58-210ENST00000477876 KMT5BQ4FZB7 885 aa10.61□□□□□ -0.71
NUP58-210ENST00000477876 IL21Q9HBE4 155 aa10.61□□□□□ -0.71
NUP58-210ENST00000477876 ZNF608Q9ULD9 1512 aaPredicted RBP10.6□□□□□ -0.71
NUP58-210ENST00000477876 CFHP08603 1231 aa10.6□□□□□ -0.71
NUP58-210ENST00000477876 DDX11L8A8MPP1 907 aa10.59□□□□□ -0.71
NUP58-210ENST00000477876 ACTN4O43707 911 aaKnown RBP10.59□□□□□ -0.71
NUP58-210ENST00000477876 SULF1Q8IWU6 871 aa10.59□□□□□ -0.71
NUP58-210ENST00000477876 PCDHB3Q9Y5E6 796 aa10.58□□□□□ -0.72
NUP58-210ENST00000477876 A0A0G2JS52 829 aa10.57□□□□□ -0.72
NUP58-210ENST00000477876 RDH13Q8NBN7 331 aa10.57□□□□□ -0.72
NUP58-210ENST00000477876 COPS2P61201 443 aa10.56□□□□□ -0.72
NUP58-210ENST00000477876 ZNF516Q92618 1163 aa10.56□□□□□ -0.72
NUP58-210ENST00000477876 TOPBP1Q92547 1522 aa10.55□□□□□ -0.72
NUP58-210ENST00000477876 MDM2Q00987 491 aaPredicted RBP10.55□□□□□ -0.72
NUP58-210ENST00000477876 PRDM2Q13029 1718 aa10.54□□□□□ -0.72
NUP58-210ENST00000477876 CLCN1P35523 988 aa10.53□□□□□ -0.72
NUP58-210ENST00000477876 GCGRP47871 477 aa10.53□□□□□ -0.72
NUP58-210ENST00000477876 BLOC1S3Q6QNY0 202 aa10.53□□□□□ -0.72
NUP58-210ENST00000477876 IFT140Q96RY7 1462 aa10.53□□□□□ -0.72
NUP58-210ENST00000477876 ZPR1O75312 459 aa10.52□□□□□ -0.73
NUP58-210ENST00000477876 GPCPD1Q9NPB8 672 aa10.52□□□□□ -0.73
NUP58-210ENST00000477876 RIMBP3CA6NJZ7 1639 aa10.51□□□□□ -0.73
NUP58-210ENST00000477876 RIMBP3BA6NNM3 1639 aa10.51□□□□□ -0.73
NUP58-210ENST00000477876 RIMBP3Q9UFD9 1639 aa10.51□□□□□ -0.73
NUP58-210ENST00000477876 TMUB1Q9BVT8 246 aa10.5□□□□□ -0.73
NUP58-210ENST00000477876 AQRO60306 1485 aaKnown RBP eCLIP10.49□□□□□ -0.731e-6■■■■■ 33.8
NUP58-210ENST00000477876 NR1I2O75469 434 aa10.49□□□□□ -0.73
NUP58-210ENST00000477876 CD46P15529 392 aa10.49□□□□□ -0.73
NUP58-210ENST00000477876 NKX2-3Q8TAU0 364 aa10.49□□□□□ -0.73
NUP58-210ENST00000477876 AK7Q96M32 723 aa10.49□□□□□ -0.73
NUP58-210ENST00000477876 ATP6V1AP38606 617 aa10.47□□□□□ -0.73
NUP58-210ENST00000477876 FUT2Q10981 343 aa10.47□□□□□ -0.73
NUP58-210ENST00000477876 AMHR2Q16671 573 aa10.47□□□□□ -0.73
NUP58-210ENST00000477876 PUS10Q3MIT2 529 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms