RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 NOS1P29475 1434 aa15.5■□□□□ 0.07
COL4A5-204ENST00000477429 LRP5O75197 1615 aa15.5■□□□□ 0.07
COL4A5-204ENST00000477429 PTPN23Q9H3S7 1636 aa15.49■□□□□ 0.07
COL4A5-204ENST00000477429 NWD1Q149M9 1564 aa15.49■□□□□ 0.07
COL4A5-204ENST00000477429 STAG3Q9UJ98 1225 aa15.48■□□□□ 0.07
COL4A5-204ENST00000477429 ADRA2BP18089 450 aa15.47■□□□□ 0.07
COL4A5-204ENST00000477429 ADGRB3O60242 1522 aa15.47■□□□□ 0.07
COL4A5-204ENST00000477429 KDM5AP29375 1690 aaKnown RBP15.45■□□□□ 0.06
COL4A5-204ENST00000477429 SLAIN2Q9P270 581 aa15.45■□□□□ 0.06
COL4A5-204ENST00000477429 JCADQ9P266 1359 aa15.45■□□□□ 0.06
COL4A5-204ENST00000477429 ZFYVE9O95405 1425 aa15.44■□□□□ 0.06
COL4A5-204ENST00000477429 FGD6Q6ZV73 1430 aa15.44■□□□□ 0.06
COL4A5-204ENST00000477429 NKTRP30414 1462 aaKnown RBP15.44■□□□□ 0.06
COL4A5-204ENST00000477429 PHLPP1O60346 1717 aa15.43■□□□□ 0.06
COL4A5-204ENST00000477429 EP400Q96L91 3159 aa15.43■□□□□ 0.06
COL4A5-204ENST00000477429 KANK1Q14678 1352 aa15.43■□□□□ 0.06
COL4A5-204ENST00000477429 COL16A1Q07092 1604 aaPredicted RBP15.43■□□□□ 0.06
COL4A5-204ENST00000477429 MYO5BQ9ULV0 1848 aa15.41■□□□□ 0.06
COL4A5-204ENST00000477429 MSH6P52701 1360 aa15.41■□□□□ 0.06
COL4A5-204ENST00000477429 NUTM2BA6NNL0 878 aaPredicted RBP15.41■□□□□ 0.06
COL4A5-204ENST00000477429 NUTM2EB1AL46 878 aaPredicted RBP15.41■□□□□ 0.06
COL4A5-204ENST00000477429 YY1P25490 414 aa15.41■□□□□ 0.06
COL4A5-204ENST00000477429 NUTM2DQ5VT03 806 aaPredicted RBP15.41■□□□□ 0.06
COL4A5-204ENST00000477429 NUTM2AQ8IVF1 878 aaPredicted RBP15.41■□□□□ 0.06
COL4A5-204ENST00000477429 ANKRD30AQ9BXX3 1397 aa15.4■□□□□ 0.06
COL4A5-204ENST00000477429 MEX3CQ5U5Q3 659 aaKnown RBP15.4■□□□□ 0.06
COL4A5-204ENST00000477429 BCANQ96GW7 911 aa15.4■□□□□ 0.06
COL4A5-204ENST00000477429 CHD2O14647 1828 aaKnown RBP15.4■□□□□ 0.06
COL4A5-204ENST00000477429 PLEKHG1Q9ULL1 1385 aa15.39■□□□□ 0.05
COL4A5-204ENST00000477429 RIMS2Q9UQ26 1411 aa15.39■□□□□ 0.05
COL4A5-204ENST00000477429 ADAMTS13Q76LX8 1427 aa15.38■□□□□ 0.05
COL4A5-204ENST00000477429 FOXD1Q16676 465 aa15.38■□□□□ 0.05
COL4A5-204ENST00000477429 TMEM131LA2VDJ0 1609 aa15.38■□□□□ 0.05
COL4A5-204ENST00000477429 SLC52A1Q9NWF4 448 aa15.37■□□□□ 0.05
COL4A5-204ENST00000477429 GCC2Q8IWJ2 1684 aa15.36■□□□□ 0.05
COL4A5-204ENST00000477429 ADGRL2O95490 1459 aa15.36■□□□□ 0.05
COL4A5-204ENST00000477429 PTPRUQ92729 1446 aa15.34■□□□□ 0.05
COL4A5-204ENST00000477429 TBX22Q9Y458 520 aa15.34■□□□□ 0.05
COL4A5-204ENST00000477429 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.33■□□□□ 0.04
COL4A5-204ENST00000477429 SPATA31A6Q5VVP1 1343 aa15.33■□□□□ 0.04
COL4A5-204ENST00000477429 ATAD2Q6PL18 1390 aa15.33■□□□□ 0.04
COL4A5-204ENST00000477429 DIP2AQ14689 1571 aa15.32■□□□□ 0.04
COL4A5-204ENST00000477429 SENP3-EIF4A1A0A087X0R7 540 aa15.32■□□□□ 0.04
COL4A5-204ENST00000477429 ANKRD50Q9ULJ7 1429 aa15.32■□□□□ 0.04
COL4A5-204ENST00000477429 RPRD2Q5VT52 1461 aaKnown RBP15.32■□□□□ 0.04
COL4A5-204ENST00000477429 AHDC1Q5TGY3 1603 aaPredicted RBP15.32■□□□□ 0.04
COL4A5-204ENST00000477429 PPP1R15AO75807 674 aaPredicted RBP15.31■□□□□ 0.04
COL4A5-204ENST00000477429 BRINP3Q76B58 766 aa15.31■□□□□ 0.04
COL4A5-204ENST00000477429 AFF2P51816 1311 aa15.31■□□□□ 0.04
COL4A5-204ENST00000477429 CHGAP10645 457 aaKnown RBP15.3■□□□□ 0.04
COL4A5-204ENST00000477429 FAM50AQ14320 339 aaKnown RBP15.29■□□□□ 0.04
COL4A5-204ENST00000477429 E9PCH4 1651 aa15.28■□□□□ 0.04
COL4A5-204ENST00000477429 SHPRHQ149N8 1683 aa15.28■□□□□ 0.04
COL4A5-204ENST00000477429 NCOA3Q9Y6Q9 1424 aa15.28■□□□□ 0.04
COL4A5-204ENST00000477429 C14orf37Q86TY3 774 aa15.28■□□□□ 0.04
COL4A5-204ENST00000477429 DDX17Q92841 729 aaKnown RBP15.28■□□□□ 0.04
COL4A5-204ENST00000477429 C19orf44Q9H6X5 657 aa15.28■□□□□ 0.04
COL4A5-204ENST00000477429 RBM6P78332 1123 aaKnown RBP15.27■□□□□ 0.04
COL4A5-204ENST00000477429 AMOTL2Q9Y2J4 779 aa15.27■□□□□ 0.04
COL4A5-204ENST00000477429 NHSL1Q5SYE7 1610 aa15.26■□□□□ 0.03
COL4A5-204ENST00000477429 UNC13BO14795 1591 aa15.26■□□□□ 0.03
COL4A5-204ENST00000477429 NRXN3Q9Y4C0 1643 aa15.25■□□□□ 0.03
COL4A5-204ENST00000477429 CEP350Q5VT06 3117 aa15.25■□□□□ 0.03
COL4A5-204ENST00000477429 KCNA4P22459 653 aa15.25■□□□□ 0.03
COL4A5-204ENST00000477429 CADPS2Q86UW7 1296 aa15.25■□□□□ 0.03
COL4A5-204ENST00000477429 ATF3P18847 181 aa15.24■□□□□ 0.03
COL4A5-204ENST00000477429 APLP2Q06481 763 aa15.24■□□□□ 0.03
COL4A5-204ENST00000477429 QTRT2Q9H974 415 aaKnown RBP15.24■□□□□ 0.03
COL4A5-204ENST00000477429 ASXL1Q8IXJ9 1541 aa15.23■□□□□ 0.03
COL4A5-204ENST00000477429 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.23■□□□□ 0.03
COL4A5-204ENST00000477429 MST1RQ04912 1400 aa15.23■□□□□ 0.03
COL4A5-204ENST00000477429 METP08581 1390 aa15.22■□□□□ 0.03
COL4A5-204ENST00000477429 PIK3R4Q99570 1358 aa15.22■□□□□ 0.03
COL4A5-204ENST00000477429 XRN1Q8IZH2 1706 aaKnown RBP15.21■□□□□ 0.03
COL4A5-204ENST00000477429 HDGFP51858 240 aaKnown RBP15.21■□□□□ 0.03
COL4A5-204ENST00000477429 TRPM2O94759 1503 aa15.21■□□□□ 0.03
COL4A5-204ENST00000477429 SETD5Q9C0A6 1442 aa15.2■□□□□ 0.02
COL4A5-204ENST00000477429 IQGAP3Q86VI3 1631 aa15.19■□□□□ 0.02
COL4A5-204ENST00000477429 PSDA5PKW4 1024 aaPredicted RBP15.18■□□□□ 0.02
COL4A5-204ENST00000477429 HRCP23327 699 aa15.18■□□□□ 0.02
COL4A5-204ENST00000477429 BCL9LQ86UU0 1499 aa15.17■□□□□ 0.02
COL4A5-204ENST00000477429 PNPLA6Q8IY17 1366 aa15.17■□□□□ 0.02
COL4A5-204ENST00000477429 DCCP43146 1447 aa15.17■□□□□ 0.02
COL4A5-204ENST00000477429 NUP155O75694 1391 aa15.16■□□□□ 0.02
COL4A5-204ENST00000477429 DEFB132Q7Z7B7 95 aa15.16■□□□□ 0.02
COL4A5-204ENST00000477429 C8orf37Q96NL8 207 aa15.16■□□□□ 0.02
COL4A5-204ENST00000477429 CCDC125Q86Z20 511 aa15.15■□□□□ 0.02
COL4A5-204ENST00000477429 ROCK1Q13464 1354 aa15.13■□□□□ 0.01
COL4A5-204ENST00000477429 NALCNQ8IZF0 1738 aa15.13■□□□□ 0.01
COL4A5-204ENST00000477429 ADGRL3Q9HAR2 1447 aa15.12■□□□□ 0.01
COL4A5-204ENST00000477429 ADAMTS2O95450 1211 aa15.12■□□□□ 0.01
COL4A5-204ENST00000477429 ITGAEP38570 1179 aa15.12■□□□□ 0.01
COL4A5-204ENST00000477429 LRRC59Q96AG4 307 aaKnown RBP15.12■□□□□ 0.01
COL4A5-204ENST00000477429 ORAI2Q96SN7 254 aa15.11■□□□□ 0.01
COL4A5-204ENST00000477429 C1orf167Q5SNV9 1468 aa15.1■□□□□ 0.01
COL4A5-204ENST00000477429 NEXMIFQ5QGS0 1516 aa15.1■□□□□ 0.01
COL4A5-204ENST00000477429 C1QTNF8P60827 252 aa15.09■□□□□ 0.01
COL4A5-204ENST00000477429 NGLY1Q96IV0 654 aa15.09■□□□□ 0.01
COL4A5-204ENST00000477429 CLTCL1P53675 1640 aa15.09■□□□□ 0.01
COL4A5-204ENST00000477429 ROBO2Q9HCK4 1378 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms