RNA–Protein interactions for RNA: ENST00000477063.5

SEC22A-205, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 759 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-205ENST00000477063 NEXMIFQ5QGS0 1516 aa18.61■□□□□ 0.57
SEC22A-205ENST00000477063 ILDR1Q86SU0 546 aaPredicted RBP18.61■□□□□ 0.57
SEC22A-205ENST00000477063 PHF23Q9BUL5 403 aaPredicted RBP18.61■□□□□ 0.57
SEC22A-205ENST00000477063 SLC24A1O60721 1099 aa18.6■□□□□ 0.57
SEC22A-205ENST00000477063 IQGAP1P46940 1657 aa18.6■□□□□ 0.57
SEC22A-205ENST00000477063 IDI1Q13907 227 aa18.59■□□□□ 0.57
SEC22A-205ENST00000477063 PIK3C2GO75747 1445 aa18.58■□□□□ 0.57
SEC22A-205ENST00000477063 FER1L4A9Z1Z3 1794 aa18.58■□□□□ 0.57
SEC22A-205ENST00000477063 VGFO15240 615 aaPredicted RBP18.58■□□□□ 0.56
SEC22A-205ENST00000477063 SCAF11Q99590 1463 aaKnown RBP18.57■□□□□ 0.56
SEC22A-205ENST00000477063 EIF3AQ14152 1382 aaKnown RBP18.56■□□□□ 0.56
SEC22A-205ENST00000477063 CCDC7Q96M83 1385 aa18.56■□□□□ 0.56
SEC22A-205ENST00000477063 NLRP1Q9C000 1473 aa18.55■□□□□ 0.56
SEC22A-205ENST00000477063 MLECQ14165 292 aa18.55■□□□□ 0.56
SEC22A-205ENST00000477063 MYO5BQ9ULV0 1848 aa18.53■□□□□ 0.56
SEC22A-205ENST00000477063 WASHC2AQ641Q2 1341 aa18.53■□□□□ 0.56
SEC22A-205ENST00000477063 CHGAP10645 457 aaKnown RBP18.53■□□□□ 0.56
SEC22A-205ENST00000477063 TNRQ92752 1358 aa18.53■□□□□ 0.56
SEC22A-205ENST00000477063 FBXO31Q5XUX0 539 aaPredicted RBP18.52■□□□□ 0.56
SEC22A-205ENST00000477063 A2ML1A8K2U0 1454 aa18.52■□□□□ 0.55
SEC22A-205ENST00000477063 C3P01024 1663 aa18.51■□□□□ 0.55
SEC22A-205ENST00000477063 NBPF1Q3BBV0 1214 aa18.51■□□□□ 0.55
SEC22A-205ENST00000477063 HIRIP3Q9BW71 556 aaPredicted RBP18.51■□□□□ 0.55
SEC22A-205ENST00000477063 C14orf93Q9H972 538 aaKnown RBP18.51■□□□□ 0.55
SEC22A-205ENST00000477063 MYO3AQ8NEV4 1616 aa18.51■□□□□ 0.55
SEC22A-205ENST00000477063 ADGRF5Q8IZF2 1346 aa18.5■□□□□ 0.55
SEC22A-205ENST00000477063 ST20-MTHFSA0A0A6YYL1 179 aa18.49■□□□□ 0.55
SEC22A-205ENST00000477063 HDGFP51858 240 aaKnown RBP18.49■□□□□ 0.55
SEC22A-205ENST00000477063 DDX10Q13206 875 aaKnown RBP18.49■□□□□ 0.55
SEC22A-205ENST00000477063 KIF7Q2M1P5 1343 aa18.49■□□□□ 0.55
SEC22A-205ENST00000477063 SBNO2Q9Y2G9 1366 aa18.48■□□□□ 0.55
SEC22A-205ENST00000477063 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.48■□□□□ 0.55
SEC22A-205ENST00000477063 ADGRB1O14514 1584 aa18.47■□□□□ 0.55
SEC22A-205ENST00000477063 STAG3Q9UJ98 1225 aa18.47■□□□□ 0.55
SEC22A-205ENST00000477063 ADAMTSL3P82987 1691 aa18.47■□□□□ 0.55
SEC22A-205ENST00000477063 UBR1Q8IWV7 1749 aa18.46■□□□□ 0.55
SEC22A-205ENST00000477063 CDCA8Q53HL2 280 aa18.45■□□□□ 0.54
SEC22A-205ENST00000477063 RIMS2Q9UQ26 1411 aa18.43■□□□□ 0.54
SEC22A-205ENST00000477063 TMF1P82094 1093 aa18.43■□□□□ 0.54
SEC22A-205ENST00000477063 CFAP70Q5T0N1 1121 aa18.43■□□□□ 0.54
SEC22A-205ENST00000477063 MIER1Q8N108 512 aa18.43■□□□□ 0.54
SEC22A-205ENST00000477063 C11orf95C9JLR9 678 aaPredicted RBP18.42■□□□□ 0.54
SEC22A-205ENST00000477063 TESK2Q96S53 571 aa18.42■□□□□ 0.54
SEC22A-205ENST00000477063 ANP32CO43423 234 aa18.41■□□□□ 0.54
SEC22A-205ENST00000477063 SLIT1O75093 1534 aa18.39■□□□□ 0.53
SEC22A-205ENST00000477063 RIMS1Q86UR5 1692 aaKnown RBP18.38■□□□□ 0.53
SEC22A-205ENST00000477063 CCER2I3L3R5 266 aa18.38■□□□□ 0.53
SEC22A-205ENST00000477063 TMEM2Q9UHN6 1383 aa18.38■□□□□ 0.53
SEC22A-205ENST00000477063 ALKQ9UM73 1620 aa18.38■□□□□ 0.53
SEC22A-205ENST00000477063 ARHGEF28Q8N1W1 1705 aaKnown RBP18.36■□□□□ 0.53
SEC22A-205ENST00000477063 ARHGAP23Q9P227 1491 aa18.36■□□□□ 0.53
SEC22A-205ENST00000477063 SETD1BQ9UPS6 1966 aaKnown RBP18.36■□□□□ 0.53
SEC22A-205ENST00000477063 SETD1AO15047 1707 aaKnown RBP18.35■□□□□ 0.53
SEC22A-205ENST00000477063 ZNF142P52746 1687 aaPredicted RBP18.35■□□□□ 0.53
SEC22A-205ENST00000477063 DLC1Q96QB1 1528 aa18.35■□□□□ 0.53
SEC22A-205ENST00000477063 PUS7Q96PZ0 661 aaKnown RBP18.35■□□□□ 0.53
SEC22A-205ENST00000477063 KTN1Q86UP2 1357 aaKnown RBP18.34■□□□□ 0.53
SEC22A-205ENST00000477063 CENPJQ9HC77 1338 aaPredicted RBP18.34■□□□□ 0.53
SEC22A-205ENST00000477063 ASXL1Q8IXJ9 1541 aa18.33■□□□□ 0.53
SEC22A-205ENST00000477063 QRICH2Q9H0J4 1663 aa18.33■□□□□ 0.52
SEC22A-205ENST00000477063 NRXN3Q9Y4C0 1643 aa18.32■□□□□ 0.52
SEC22A-205ENST00000477063 THEMISQ8N1K5 641 aaPredicted RBP18.32■□□□□ 0.52
SEC22A-205ENST00000477063 DISP3Q9P2K9 1392 aa18.31■□□□□ 0.52
SEC22A-205ENST00000477063 CEP170BQ9Y4F5 1589 aaPredicted RBP18.31■□□□□ 0.52
SEC22A-205ENST00000477063 KNDC1Q76NI1 1749 aa18.31■□□□□ 0.52
SEC22A-205ENST00000477063 YTHDC2Q9H6S0 1430 aaKnown RBP18.31■□□□□ 0.52
SEC22A-205ENST00000477063 PLEKHG1Q9ULL1 1385 aa18.3■□□□□ 0.52
SEC22A-205ENST00000477063 DIP2AQ14689 1571 aa18.3■□□□□ 0.52
SEC22A-205ENST00000477063 KDM4FA0A1W2PPD8 638 aa18.3■□□□□ 0.52
SEC22A-205ENST00000477063 LRPPRCP42704 1394 aaKnown RBP18.29■□□□□ 0.52
SEC22A-205ENST00000477063 SIRT1Q96EB6 747 aa18.28■□□□□ 0.52
SEC22A-205ENST00000477063 EID1Q9Y6B2 187 aa18.28■□□□□ 0.52
SEC22A-205ENST00000477063 ABCC11Q96J66 1382 aa18.28■□□□□ 0.52
SEC22A-205ENST00000477063 CEBPAP49715 358 aaPredicted RBP18.27■□□□□ 0.52
SEC22A-205ENST00000477063 TECPR2O15040 1411 aa18.26■□□□□ 0.51
SEC22A-205ENST00000477063 PTPRMP28827 1452 aa18.26■□□□□ 0.51
SEC22A-205ENST00000477063 TRAK1Q9UPV9 953 aa18.25■□□□□ 0.51
SEC22A-205ENST00000477063 NUTM2DQ5VT03 806 aaPredicted RBP18.24■□□□□ 0.51
SEC22A-205ENST00000477063 TMEM132EQ6IEE7 984 aa18.24■□□□□ 0.51
SEC22A-205ENST00000477063 PRKRIP1Q9H875 184 aaPredicted RBP18.24■□□□□ 0.51
SEC22A-205ENST00000477063 MYOM1P52179 1685 aa18.24■□□□□ 0.51
SEC22A-205ENST00000477063 FAM135BQ49AJ0 1406 aa18.23■□□□□ 0.51
SEC22A-205ENST00000477063 MED14O60244 1454 aa18.23■□□□□ 0.51
SEC22A-205ENST00000477063 NINLQ9Y2I6 1382 aa18.23■□□□□ 0.51
SEC22A-205ENST00000477063 CPS1P31327 1500 aa18.23■□□□□ 0.51
SEC22A-205ENST00000477063 EVC2Q86UK5 1308 aa18.22■□□□□ 0.51
SEC22A-205ENST00000477063 POLR3GLQ9BT43 218 aa18.21■□□□□ 0.51
SEC22A-205ENST00000477063 ADAMTS13Q76LX8 1427 aa18.21■□□□□ 0.51
SEC22A-205ENST00000477063 NPC1L1Q9UHC9 1359 aa18.2■□□□□ 0.5
SEC22A-205ENST00000477063 RALBP1Q15311 655 aa18.2■□□□□ 0.5
SEC22A-205ENST00000477063 TXNDC2Q86VQ3 553 aa18.2■□□□□ 0.5
SEC22A-205ENST00000477063 PIK3R4Q99570 1358 aa18.19■□□□□ 0.5
SEC22A-205ENST00000477063 PER1O15534 1290 aaPredicted RBP18.18■□□□□ 0.5
SEC22A-205ENST00000477063 TBX22Q9Y458 520 aa18.18■□□□□ 0.5
SEC22A-205ENST00000477063 CENPBP07199 599 aaPredicted RBP18.17■□□□□ 0.5
SEC22A-205ENST00000477063 TULP4Q9NRJ4 1543 aa18.17■□□□□ 0.5
SEC22A-205ENST00000477063 LTKP29376 864 aa18.16■□□□□ 0.5
SEC22A-205ENST00000477063 ATAD2Q6PL18 1390 aa18.16■□□□□ 0.5
SEC22A-205ENST00000477063 POGKQ9P215 609 aa18.15■□□□□ 0.5
SEC22A-205ENST00000477063 METP08581 1390 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms