RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	STK26	Q9P289	416 aa		7.61	□□□□□ -1.19
HNRNPU-208	ENST00000475997	MAGI1	Q96QZ7	1491 aa	Predicted RBP	7.61	□□□□□ -1.19
HNRNPU-208	ENST00000475997	PHF14	O94880	888 aa		7.61	□□□□□ -1.19
HNRNPU-208	ENST00000475997	EIF3A	Q14152	1382 aa	Known RBP	7.61	□□□□□ -1.19
HNRNPU-208	ENST00000475997	KDM6B	O15054	1643 aa		7.61	□□□□□ -1.19
HNRNPU-208	ENST00000475997	FAM161A	Q3B820	660 aa		7.61	□□□□□ -1.19
HNRNPU-208	ENST00000475997	BCL2L13	Q9BXK5	485 aa		7.61	□□□□□ -1.19
HNRNPU-208	ENST00000475997	WDR62	O43379	1518 aa		7.61	□□□□□ -1.19
HNRNPU-208	ENST00000475997	CENPJ	Q9HC77	1338 aa	Predicted RBP	7.61	□□□□□ -1.19
HNRNPU-208	ENST00000475997	MAPK8IP3	Q9UPT6	1336 aa		7.61	□□□□□ -1.19
HNRNPU-208	ENST00000475997	CALD1	Q05682	793 aa	Known RBP	7.6	□□□□□ -1.19
HNRNPU-208	ENST00000475997	CSPP1	Q1MSJ5	1256 aa		7.6	□□□□□ -1.19
HNRNPU-208	ENST00000475997	TEX35	Q5T0J7	233 aa		7.6	□□□□□ -1.19
HNRNPU-208	ENST00000475997	ESF1	Q9H501	851 aa	Known RBP	7.6	□□□□□ -1.19
HNRNPU-208	ENST00000475997	COG6	Q9Y2V7	657 aa		7.6	□□□□□ -1.19
HNRNPU-208	ENST00000475997	NOM1	Q5C9Z4	860 aa	Known RBP	7.6	□□□□□ -1.19
HNRNPU-208	ENST00000475997	PKNOX2	Q96KN3	472 aa		7.6	□□□□□ -1.19
HNRNPU-208	ENST00000475997	SRPK2	P78362	688 aa	Known RBP	7.6	□□□□□ -1.19
HNRNPU-208	ENST00000475997	CFAP70	Q5T0N1	1121 aa		7.6	□□□□□ -1.19
HNRNPU-208	ENST00000475997	SLK	Q9H2G2	1235 aa	Predicted RBP	7.6	□□□□□ -1.19
HNRNPU-208	ENST00000475997	ARHGAP5	Q13017	1502 aa		7.6	□□□□□ -1.19
HNRNPU-208	ENST00000475997	ABCA5	Q8WWZ7	1642 aa		7.6	□□□□□ -1.19
HNRNPU-208	ENST00000475997	POGK	Q9P215	609 aa		7.6	□□□□□ -1.19
HNRNPU-208	ENST00000475997	SPRYD3	Q8NCJ5	442 aa		7.59	□□□□□ -1.19
HNRNPU-208	ENST00000475997	PZP	P20742	1482 aa		7.59	□□□□□ -1.19
HNRNPU-208	ENST00000475997	TEX14	Q8IWB6	1497 aa		7.59	□□□□□ -1.19
HNRNPU-208	ENST00000475997		E9PSI1	815 aa		7.59	□□□□□ -1.19
HNRNPU-208	ENST00000475997	C20orf194	Q5TEA3	1177 aa		7.59	□□□□□ -1.19
HNRNPU-208	ENST00000475997	GZF1	Q9H116	711 aa	Predicted RBP	7.59	□□□□□ -1.19
HNRNPU-208	ENST00000475997	SPATA31E1	Q6ZUB1	1445 aa		7.58	□□□□□ -1.2
HNRNPU-208	ENST00000475997	ERBIN	Q96RT1	1412 aa		7.58	□□□□□ -1.2
HNRNPU-208	ENST00000475997	RAPGEF6	Q8TEU7	1601 aa		7.58	□□□□□ -1.2
HNRNPU-208	ENST00000475997	TPM3	P06753	285 aa		7.58	□□□□□ -1.2
HNRNPU-208	ENST00000475997	PODXL2	Q9NZ53	605 aa		7.58	□□□□□ -1.2
HNRNPU-208	ENST00000475997	DDX11L8	A8MPP1	907 aa		7.58	□□□□□ -1.2
HNRNPU-208	ENST00000475997	HAP1	P54257	671 aa	Predicted RBP	7.58	□□□□□ -1.2
HNRNPU-208	ENST00000475997	BCAR3	O75815	825 aa		7.57	□□□□□ -1.2
HNRNPU-208	ENST00000475997	DISP1	Q96F81	1524 aa		7.57	□□□□□ -1.2
HNRNPU-208	ENST00000475997	ADAMTS12	P58397	1594 aa		7.57	□□□□□ -1.2
HNRNPU-208	ENST00000475997	KIF21A	Q7Z4S6	1674 aa		7.57	□□□□□ -1.2
HNRNPU-208	ENST00000475997	CCDC141	Q6ZP82	1450 aa		7.57	□□□□□ -1.2
HNRNPU-208	ENST00000475997	GSE1	Q14687	1217 aa		7.57	□□□□□ -1.2
HNRNPU-208	ENST00000475997	PANK1	Q8TE04	598 aa		7.57	□□□□□ -1.2
HNRNPU-208	ENST00000475997	RWDD1	Q9H446	243 aa	Predicted RBP	7.56	□□□□□ -1.2
HNRNPU-208	ENST00000475997	ATP10B	O94823	1461 aa		7.56	□□□□□ -1.2
HNRNPU-208	ENST00000475997	CCDC66	A2RUB6	948 aa		7.56	□□□□□ -1.2
HNRNPU-208	ENST00000475997	SKOR2	Q2VWA4	1001 aa	Predicted RBP	7.56	□□□□□ -1.2
HNRNPU-208	ENST00000475997	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	7.56	□□□□□ -1.2
HNRNPU-208	ENST00000475997	DISP3	Q9P2K9	1392 aa		7.56	□□□□□ -1.2
HNRNPU-208	ENST00000475997	DNMT1	P26358	1616 aa	Known RBP	7.56	□□□□□ -1.2
HNRNPU-208	ENST00000475997	RALGAPB	Q86X10	1494 aa		7.56	□□□□□ -1.2
HNRNPU-208	ENST00000475997	CGNL1	Q0VF96	1302 aa		7.56	□□□□□ -1.2
HNRNPU-208	ENST00000475997	TMEM132E	Q6IEE7	984 aa		7.56	□□□□□ -1.2
HNRNPU-208	ENST00000475997	PMFBP1	Q8TBY8	1022 aa		7.56	□□□□□ -1.2
HNRNPU-208	ENST00000475997	KIAA0556	O60303	1618 aa		7.56	□□□□□ -1.2
HNRNPU-208	ENST00000475997	TULP1	O00294	542 aa	Predicted RBP	7.55	□□□□□ -1.2
HNRNPU-208	ENST00000475997	STAC3	Q96MF2	364 aa		7.55	□□□□□ -1.2
HNRNPU-208	ENST00000475997	PER1	O15534	1290 aa	Predicted RBP	7.55	□□□□□ -1.2
HNRNPU-208	ENST00000475997	NAP1L2	Q9ULW6	460 aa	Predicted RBP	7.55	□□□□□ -1.2
HNRNPU-208	ENST00000475997	GCC2	Q8IWJ2	1684 aa		7.55	□□□□□ -1.2
HNRNPU-208	ENST00000475997	CCDC70	Q6NSX1	233 aa		7.55	□□□□□ -1.2
HNRNPU-208	ENST00000475997	SMC4	Q9NTJ3	1288 aa		7.55	□□□□□ -1.2
HNRNPU-208	ENST00000475997	DENND4B	O75064	1496 aa	Predicted RBP	7.55	□□□□□ -1.2
HNRNPU-208	ENST00000475997	OS9	Q13438	667 aa	Predicted RBP	7.55	□□□□□ -1.2
HNRNPU-208	ENST00000475997	NFKBIB	Q15653	356 aa		7.55	□□□□□ -1.2
HNRNPU-208	ENST00000475997	ITPRIP	Q8IWB1	547 aa		7.55	□□□□□ -1.2
HNRNPU-208	ENST00000475997	PLEKHH2	Q8IVE3	1493 aa		7.54	□□□□□ -1.2
HNRNPU-208	ENST00000475997	KIF14	Q15058	1648 aa		7.54	□□□□□ -1.2
HNRNPU-208	ENST00000475997	GNL2	Q13823	731 aa	Known RBP	7.54	□□□□□ -1.2
HNRNPU-208	ENST00000475997	TESK2	Q96S53	571 aa		7.54	□□□□□ -1.2
HNRNPU-208	ENST00000475997	RRP12	Q5JTH9	1297 aa	Known RBP	7.54	□□□□□ -1.2
HNRNPU-208	ENST00000475997	SLC12A5	Q9H2X9	1139 aa		7.54	□□□□□ -1.2
HNRNPU-208	ENST00000475997	KIAA1211	Q6ZU35	1233 aa		7.54	□□□□□ -1.2
HNRNPU-208	ENST00000475997	ZBTB7C	A1YPR0	619 aa		7.53	□□□□□ -1.2
HNRNPU-208	ENST00000475997	PLPPR3	Q6T4P5	718 aa		7.53	□□□□□ -1.2
HNRNPU-208	ENST00000475997	TCP11L2	Q8N4U5	519 aa		7.53	□□□□□ -1.2
HNRNPU-208	ENST00000475997	RNF123	Q5XPI4	1314 aa		7.53	□□□□□ -1.2
HNRNPU-208	ENST00000475997	SLFN5	Q08AF3	891 aa		7.53	□□□□□ -1.2
HNRNPU-208	ENST00000475997	CWC15	Q9P013	229 aa	Known RBP	7.53	□□□□□ -1.2
HNRNPU-208	ENST00000475997	MTHFS	P49914	203 aa		7.53	□□□□□ -1.2
HNRNPU-208	ENST00000475997	DUSP27	Q5VZP5	1158 aa		7.53	□□□□□ -1.2
HNRNPU-208	ENST00000475997	TARBP1	Q13395	1621 aa	Known RBP	7.53	□□□□□ -1.2
HNRNPU-208	ENST00000475997	NGEF	Q8N5V2	710 aa		7.53	□□□□□ -1.2
HNRNPU-208	ENST00000475997	PARD3	Q8TEW0	1356 aa		7.53	□□□□□ -1.2
HNRNPU-208	ENST00000475997	HMMR	O75330	724 aa		7.52	□□□□□ -1.2
HNRNPU-208	ENST00000475997	MFAP1	P55081	439 aa	Known RBP	7.52	□□□□□ -1.2
HNRNPU-208	ENST00000475997	RUNDC1	Q96C34	613 aa		7.52	□□□□□ -1.2
HNRNPU-208	ENST00000475997	LRPPRC	P42704	1394 aa	Known RBP	7.52	□□□□□ -1.21
HNRNPU-208	ENST00000475997	PRAG1	Q86YV5	1406 aa		7.52	□□□□□ -1.21
HNRNPU-208	ENST00000475997	ACBD3	Q9H3P7	528 aa		7.52	□□□□□ -1.21
HNRNPU-208	ENST00000475997	KDM5B	Q9UGL1	1544 aa		7.52	□□□□□ -1.21
HNRNPU-208	ENST00000475997	FAM13B	Q9NYF5	915 aa		7.52	□□□□□ -1.21
HNRNPU-208	ENST00000475997	CDR1	P51861	262 aa		7.51	□□□□□ -1.21
HNRNPU-208	ENST00000475997	CEP89	Q96ST8	783 aa		7.51	□□□□□ -1.21
HNRNPU-208	ENST00000475997	PBRM1	Q86U86	1689 aa		7.51	□□□□□ -1.21
HNRNPU-208	ENST00000475997	ITSN2	Q9NZM3	1697 aa		7.51	□□□□□ -1.21
HNRNPU-208	ENST00000475997	IPO8	O15397	1037 aa	Known RBP	7.51	□□□□□ -1.21
HNRNPU-208	ENST00000475997	ARGLU1	Q9NWB6	273 aa	Predicted RBP	7.51	□□□□□ -1.21
HNRNPU-208	ENST00000475997	UHRF1BP1	Q6BDS2	1440 aa		7.51	□□□□□ -1.21
HNRNPU-208	ENST00000475997	ZKSCAN2	Q63HK3	967 aa		7.51	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms