RNA–Protein interactions for RNA: ENST00000475717.1

TOP2B-206, Transcript of DNA topoisomerase II beta, humanhuman

TSL 4

Gene TOP2B, Length 540 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-206ENST00000475717 IL27Q8NEV9 243 aa10.51□□□□□ -0.73
TOP2B-206ENST00000475717 HPS5Q9UPZ3 1129 aa10.51□□□□□ -0.73
TOP2B-206ENST00000475717 SAMD7Q7Z3H4 446 aa10.49□□□□□ -0.73
TOP2B-206ENST00000475717 WBP1LQ9NX94 342 aa10.49□□□□□ -0.73
TOP2B-206ENST00000475717 RNF40O75150 1001 aa10.48□□□□□ -0.73
TOP2B-206ENST00000475717 FECHP22830 423 aa10.48□□□□□ -0.73
TOP2B-206ENST00000475717 PTGDRQ13258 359 aa10.48□□□□□ -0.73
TOP2B-206ENST00000475717 AMHR2Q16671 573 aa10.48□□□□□ -0.73
TOP2B-206ENST00000475717 TTC13Q8NBP0 860 aa10.47□□□□□ -0.73
TOP2B-206ENST00000475717 TSR3Q9UJK0 312 aaKnown RBP10.46□□□□□ -0.73
TOP2B-206ENST00000475717 PARP9Q8IXQ6 854 aa10.44□□□□□ -0.74
TOP2B-206ENST00000475717 HDGFP51858 240 aaKnown RBP10.43□□□□□ -0.74
TOP2B-206ENST00000475717 PPP4CP60510 307 aa10.43□□□□□ -0.74
TOP2B-206ENST00000475717 FAM117AQ9C073 453 aa10.43□□□□□ -0.74
TOP2B-206ENST00000475717 DDRGK1Q96HY6 314 aa10.42□□□□□ -0.74
TOP2B-206ENST00000475717 FAM161AQ3B820 660 aa10.41□□□□□ -0.74
TOP2B-206ENST00000475717 SWT1Q5T5J6 900 aaKnown RBP10.41□□□□□ -0.74
TOP2B-206ENST00000475717 NYAP1Q6ZVC0 841 aa10.41□□□□□ -0.74
TOP2B-206ENST00000475717 TTLL12Q14166 644 aaPredicted RBP10.4□□□□□ -0.74
TOP2B-206ENST00000475717 EYA1Q99502 592 aa10.39□□□□□ -0.75
TOP2B-206ENST00000475717 RBM46Q8TBY0 533 aaKnown RBP10.38□□□□□ -0.75
TOP2B-206ENST00000475717 ADGRG1Q9Y653 693 aa10.38□□□□□ -0.75
TOP2B-206ENST00000475717 PLEKHG3A1L390 1219 aa10.37□□□□□ -0.75
TOP2B-206ENST00000475717 ITGBL1O95965 494 aaPredicted RBP10.35□□□□□ -0.75
TOP2B-206ENST00000475717 DNAJB2P25686 324 aa10.35□□□□□ -0.75
TOP2B-206ENST00000475717 SLC4A3P48751 1232 aa10.35□□□□□ -0.75
TOP2B-206ENST00000475717 SLF2Q8IX21 1173 aa10.35□□□□□ -0.75
TOP2B-206ENST00000475717 GIGYF2Q6Y7W6 1299 aaKnown RBP10.34□□□□□ -0.75
TOP2B-206ENST00000475717 KCNC4Q03721 635 aa10.33□□□□□ -0.76
TOP2B-206ENST00000475717 IFFO2Q5TF58 517 aa10.33□□□□□ -0.76
TOP2B-206ENST00000475717 A0A0G2JS52 829 aa10.32□□□□□ -0.76
TOP2B-206ENST00000475717 RCCD1A6NED2 376 aa10.32□□□□□ -0.76
TOP2B-206ENST00000475717 APLP1P51693 650 aa10.31□□□□□ -0.76
TOP2B-206ENST00000475717 NECTIN2Q92692 538 aa10.3□□□□□ -0.76
TOP2B-206ENST00000475717 ARXQ96QS3 562 aa10.3□□□□□ -0.76
TOP2B-206ENST00000475717 REPIN1Q9BWE0 567 aaKnown RBP10.3□□□□□ -0.76
TOP2B-206ENST00000475717 TMEM134Q9H6X4 195 aa10.3□□□□□ -0.76
TOP2B-206ENST00000475717 MS4A1P11836 297 aa10.29□□□□□ -0.76
TOP2B-206ENST00000475717 CLCN1P35523 988 aa10.29□□□□□ -0.76
TOP2B-206ENST00000475717 OATP04181 439 aa10.28□□□□□ -0.76
TOP2B-206ENST00000475717 PXYLP1Q8TE99 480 aa10.28□□□□□ -0.76
TOP2B-206ENST00000475717 MTRQ99707 1265 aa10.28□□□□□ -0.76
TOP2B-206ENST00000475717 GOPCQ9HD26 462 aa10.28□□□□□ -0.76
TOP2B-206ENST00000475717 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.27□□□□□ -0.77
TOP2B-206ENST00000475717 TMUB1Q9BVT8 246 aa10.27□□□□□ -0.77
TOP2B-206ENST00000475717 GPCPD1Q9NPB8 672 aa10.27□□□□□ -0.77
TOP2B-206ENST00000475717 SUPT5HO00267 1087 aaKnown RBP10.26□□□□□ -0.77
TOP2B-206ENST00000475717 MDM2Q00987 491 aaPredicted RBP10.26□□□□□ -0.77
TOP2B-206ENST00000475717 TJAP1Q5JTD0 557 aa10.26□□□□□ -0.77
TOP2B-206ENST00000475717 METTL3Q86U44 580 aaKnown RBP10.26□□□□□ -0.77
TOP2B-206ENST00000475717 PHOX2BQ99453 314 aa10.26□□□□□ -0.77
TOP2B-206ENST00000475717 COPS2P61201 443 aa10.25□□□□□ -0.77
TOP2B-206ENST00000475717 IL21Q9HBE4 155 aa10.25□□□□□ -0.77
TOP2B-206ENST00000475717 NLRP7Q8WX94 980 aa10.24□□□□□ -0.77
TOP2B-206ENST00000475717 CFHP08603 1231 aa10.22□□□□□ -0.77
TOP2B-206ENST00000475717 ZNF516Q92618 1163 aa10.22□□□□□ -0.77
TOP2B-206ENST00000475717 PRR14Q9BWN1 585 aa10.22□□□□□ -0.77
TOP2B-206ENST00000475717 ZMYND15Q9H091 742 aa10.22□□□□□ -0.77
TOP2B-206ENST00000475717 PCMTD1Q96MG8 357 aaPredicted RBP10.21□□□□□ -0.77
TOP2B-206ENST00000475717 PCDHB3Q9Y5E6 796 aa10.21□□□□□ -0.77
TOP2B-206ENST00000475717 SSTR3P32745 418 aaPredicted RBP10.2□□□□□ -0.78
TOP2B-206ENST00000475717 KMT5BQ4FZB7 885 aa10.2□□□□□ -0.78
TOP2B-206ENST00000475717 SH3D19Q5HYK7 790 aa10.2□□□□□ -0.78
TOP2B-206ENST00000475717 SLC10A3P09131 477 aa10.19□□□□□ -0.78
TOP2B-206ENST00000475717 FAM217BQ9NTX9 383 aaPredicted RBP10.19□□□□□ -0.78
TOP2B-206ENST00000475717 FLIIQ13045 1269 aa10.18□□□□□ -0.78
TOP2B-206ENST00000475717 BLOC1S3Q6QNY0 202 aa10.18□□□□□ -0.78
TOP2B-206ENST00000475717 RDH13Q8NBN7 331 aa10.17□□□□□ -0.78
TOP2B-206ENST00000475717 NKX2-3Q8TAU0 364 aa10.17□□□□□ -0.78
TOP2B-206ENST00000475717 BEGAINQ9BUH8 593 aa10.17□□□□□ -0.78
TOP2B-206ENST00000475717 RSPH6AQ9H0K4 717 aa10.17□□□□□ -0.78
TOP2B-206ENST00000475717 DDX11L8A8MPP1 907 aa10.16□□□□□ -0.78
TOP2B-206ENST00000475717 RGS20O76081 388 aa10.16□□□□□ -0.78
TOP2B-206ENST00000475717 HOMEZQ8IX15 550 aa10.16□□□□□ -0.78
TOP2B-206ENST00000475717 ACTN4O43707 911 aaKnown RBP10.15□□□□□ -0.78
TOP2B-206ENST00000475717 RSPH4AQ5TD94 716 aa10.15□□□□□ -0.78
TOP2B-206ENST00000475717 ZPR1O75312 459 aa10.14□□□□□ -0.79
TOP2B-206ENST00000475717 SKIV2LQ15477 1246 aaKnown RBP10.14□□□□□ -0.79
TOP2B-206ENST00000475717 TLL1O43897 1013 aa10.13□□□□□ -0.79
TOP2B-206ENST00000475717 PPP1R18Q6NYC8 613 aa10.12□□□□□ -0.79
TOP2B-206ENST00000475717 PUS10Q3MIT2 529 aaKnown RBP10.1□□□□□ -0.79
TOP2B-206ENST00000475717 SULF1Q8IWU6 871 aa10.09□□□□□ -0.79
TOP2B-206ENST00000475717 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.09□□□□□ -0.79
TOP2B-206ENST00000475717 NR1I2O75469 434 aa10.08□□□□□ -0.8
TOP2B-206ENST00000475717 MYSM1Q5VVJ2 828 aa10.08□□□□□ -0.8
TOP2B-206ENST00000475717 GGCXP38435 758 aa10.07□□□□□ -0.8
TOP2B-206ENST00000475717 DIXDC1Q155Q3 683 aa10.07□□□□□ -0.8
TOP2B-206ENST00000475717 POLR3EQ9NVU0 708 aa10.07□□□□□ -0.8
TOP2B-206ENST00000475717 ATP1B4Q9UN42 357 aaPredicted RBP10.07□□□□□ -0.8
TOP2B-206ENST00000475717 PROCA1Q8NCQ7 364 aaPredicted RBP10.06□□□□□ -0.8
TOP2B-206ENST00000475717 IRX2Q9BZI1 471 aaPredicted RBP10.06□□□□□ -0.8
TOP2B-206ENST00000475717 CLK2P49760 499 aaKnown RBP10.05□□□□□ -0.8
TOP2B-206ENST00000475717 FUT2Q10981 343 aa10.05□□□□□ -0.8
TOP2B-206ENST00000475717 MCM6Q14566 821 aa10.05□□□□□ -0.8
TOP2B-206ENST00000475717 PRKD2Q9BZL6 878 aa10.05□□□□□ -0.8
TOP2B-206ENST00000475717 GCGRP47871 477 aa10.04□□□□□ -0.8
TOP2B-206ENST00000475717 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.04□□□□□ -0.8
TOP2B-206ENST00000475717 TBC1D2Q9BYX2 928 aa10.04□□□□□ -0.8
TOP2B-206ENST00000475717 S1PR4O95977 384 aa10.03□□□□□ -0.8
TOP2B-206ENST00000475717 ADH1BP00325 375 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms