RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 TPRNQ4KMQ1 711 aa15.05■□□□□ -0
SMC5-203ENST00000475540 PHOX2BQ99453 314 aa15.05■□□□□ -0
SMC5-203ENST00000475540 SLC24A3Q9HC58 644 aa15.04■□□□□ -0
SMC5-203ENST00000475540 PTPN5P54829 565 aa15.03■□□□□ -0
SMC5-203ENST00000475540 SLF2Q8IX21 1173 aa15.02■□□□□ -0
SMC5-203ENST00000475540 HCSTQ9UBK5 93 aa15.02■□□□□ -0
SMC5-203ENST00000475540 RNF40O75150 1001 aa15.01□□□□□ -0.01
SMC5-203ENST00000475540 NLRP7Q8WX94 980 aa15□□□□□ -0.01
SMC5-203ENST00000475540 DAXXQ9UER7 740 aaPredicted RBP15□□□□□ -0.01
SMC5-203ENST00000475540 TSR3Q9UJK0 312 aaKnown RBP15□□□□□ -0.01
SMC5-203ENST00000475540 PPP4CP60510 307 aa14.99□□□□□ -0.01
SMC5-203ENST00000475540 HPS5Q9UPZ3 1129 aa14.99□□□□□ -0.01
SMC5-203ENST00000475540 NECTIN2Q92692 538 aa14.97□□□□□ -0.01
SMC5-203ENST00000475540 TRIM66O15016 1216 aa14.96□□□□□ -0.01
SMC5-203ENST00000475540 MDM2Q00987 491 aaPredicted RBP14.96□□□□□ -0.01
SMC5-203ENST00000475540 RSPH4AQ5TD94 716 aa14.95□□□□□ -0.02
SMC5-203ENST00000475540 CLCN1P35523 988 aa14.94□□□□□ -0.02
SMC5-203ENST00000475540 WBP1LQ9NX94 342 aa14.94□□□□□ -0.02
SMC5-203ENST00000475540 AMHR2Q16671 573 aa14.92□□□□□ -0.02
SMC5-203ENST00000475540 SULF1Q8IWU6 871 aa14.92□□□□□ -0.02
SMC5-203ENST00000475540 GPCPD1Q9NPB8 672 aa14.92□□□□□ -0.02
SMC5-203ENST00000475540 NYAP1Q6ZVC0 841 aa14.91□□□□□ -0.02
SMC5-203ENST00000475540 DDX11L8A8MPP1 907 aa14.9□□□□□ -0.02
SMC5-203ENST00000475540 TTLL12Q14166 644 aaPredicted RBP14.9□□□□□ -0.02
SMC5-203ENST00000475540 PDE4DQ08499 809 aa14.87□□□□□ -0.03
SMC5-203ENST00000475540 RDH13Q8NBN7 331 aa14.87□□□□□ -0.03
SMC5-203ENST00000475540 SLC10A3P09131 477 aa14.86□□□□□ -0.03
SMC5-203ENST00000475540 TMUB1Q9BVT8 246 aa14.86□□□□□ -0.03
SMC5-203ENST00000475540 PRKCSHP14314 528 aaPredicted RBP14.85□□□□□ -0.03
SMC5-203ENST00000475540 PRR14Q9BWN1 585 aa14.84□□□□□ -0.03
SMC5-203ENST00000475540 KMT5BQ4FZB7 885 aa14.83□□□□□ -0.04
SMC5-203ENST00000475540 REPIN1Q9BWE0 567 aaKnown RBP14.83□□□□□ -0.04
SMC5-203ENST00000475540 FAM217BQ9NTX9 383 aaPredicted RBP14.82□□□□□ -0.04
SMC5-203ENST00000475540 CFHP08603 1231 aa14.81□□□□□ -0.04
SMC5-203ENST00000475540 SSTR3P32745 418 aaPredicted RBP14.81□□□□□ -0.04
SMC5-203ENST00000475540 APLP1P51693 650 aa14.8□□□□□ -0.04
SMC5-203ENST00000475540 GIGYF2Q6Y7W6 1299 aaKnown RBP14.8□□□□□ -0.04
SMC5-203ENST00000475540 PARP9Q8IXQ6 854 aa14.8□□□□□ -0.04
SMC5-203ENST00000475540 CD46P15529 392 aa14.78□□□□□ -0.04
SMC5-203ENST00000475540 GCGRP47871 477 aa14.76□□□□□ -0.05
SMC5-203ENST00000475540 ACTN4O43707 911 aaKnown RBP14.74□□□□□ -0.05
SMC5-203ENST00000475540 PCDHB3Q9Y5E6 796 aa14.72□□□□□ -0.05
SMC5-203ENST00000475540 KDM4AO75164 1064 aa14.68□□□□□ -0.06
SMC5-203ENST00000475540 MS4A1P11836 297 aa14.68□□□□□ -0.06
SMC5-203ENST00000475540 NUTM1Q86Y26 1132 aa14.68□□□□□ -0.06
SMC5-203ENST00000475540 BEGAINQ9BUH8 593 aa14.68□□□□□ -0.06
SMC5-203ENST00000475540 FUT2Q10981 343 aa14.67□□□□□ -0.06
SMC5-203ENST00000475540 GRIPAP1Q4V328 841 aa14.67□□□□□ -0.06
SMC5-203ENST00000475540 MTRQ99707 1265 aa14.67□□□□□ -0.06
SMC5-203ENST00000475540 GPBP1L1Q9HC44 474 aaPredicted RBP14.67□□□□□ -0.06
SMC5-203ENST00000475540 ATP6V1AP38606 617 aa14.66□□□□□ -0.06
SMC5-203ENST00000475540 NEUROD2Q15784 382 aa14.66□□□□□ -0.06
SMC5-203ENST00000475540 KDM4CQ9H3R0 1056 aa14.66□□□□□ -0.06
SMC5-203ENST00000475540 COPS2P61201 443 aa14.65□□□□□ -0.06
SMC5-203ENST00000475540 TJAP1Q5JTD0 557 aa14.65□□□□□ -0.06
SMC5-203ENST00000475540 IL21Q9HBE4 155 aa14.65□□□□□ -0.06
SMC5-203ENST00000475540 PLA2G2EQ9NZK7 142 aa14.65□□□□□ -0.06
SMC5-203ENST00000475540 ITGBL1O95965 494 aaPredicted RBP14.64□□□□□ -0.07
SMC5-203ENST00000475540 USP46P62068 366 aa14.64□□□□□ -0.07
SMC5-203ENST00000475540 KCNC4Q03721 635 aa14.64□□□□□ -0.07
SMC5-203ENST00000475540 PUS10Q3MIT2 529 aaKnown RBP14.63□□□□□ -0.07
SMC5-203ENST00000475540 BLOC1S3Q6QNY0 202 aa14.63□□□□□ -0.07
SMC5-203ENST00000475540 NR1I2O75469 434 aa14.62□□□□□ -0.07
SMC5-203ENST00000475540 DIXDC1Q155Q3 683 aa14.61□□□□□ -0.07
SMC5-203ENST00000475540 BRPF1P55201 1214 aaPredicted RBP14.59□□□□□ -0.07
SMC5-203ENST00000475540 MORN1Q5T089 497 aa14.59□□□□□ -0.07
SMC5-203ENST00000475540 SPIRE2Q8WWL2 714 aa14.59□□□□□ -0.07
SMC5-203ENST00000475540 ZPR1O75312 459 aa14.58□□□□□ -0.08
SMC5-203ENST00000475540 SCUBE3Q8IX30 993 aa14.58□□□□□ -0.08
SMC5-203ENST00000475540 ZNF516Q92618 1163 aa14.58□□□□□ -0.08
SMC5-203ENST00000475540 IFFO2Q5TF58 517 aa14.56□□□□□ -0.08
SMC5-203ENST00000475540 DDRGK1Q96HY6 314 aa14.56□□□□□ -0.08
SMC5-203ENST00000475540 TBC1D2Q9BYX2 928 aa14.56□□□□□ -0.08
SMC5-203ENST00000475540 HOXA2O43364 376 aa14.55□□□□□ -0.08
SMC5-203ENST00000475540 FAM117AQ9C073 453 aa14.54□□□□□ -0.08
SMC5-203ENST00000475540 SLC27A5Q9Y2P5 690 aa14.54□□□□□ -0.08
SMC5-203ENST00000475540 RSPH6AQ9H0K4 717 aa14.52□□□□□ -0.09
SMC5-203ENST00000475540 Q3C1V9 767 aa14.5□□□□□ -0.09
SMC5-203ENST00000475540 MOXD2PA6NHM9 499 aa14.49□□□□□ -0.09
SMC5-203ENST00000475540 FMNL1O95466 1100 aaPredicted RBP14.49□□□□□ -0.09
SMC5-203ENST00000475540 NDUFV2P19404 249 aa14.49□□□□□ -0.09
SMC5-203ENST00000475540 HLA-CQ95604 372 aa14.49□□□□□ -0.09
SMC5-203ENST00000475540 SALL2Q9Y467 1007 aaPredicted RBP14.49□□□□□ -0.09
SMC5-203ENST00000475540 FDX1P10109 184 aa14.48□□□□□ -0.09
SMC5-203ENST00000475540 NKX2-3Q8TAU0 364 aa14.48□□□□□ -0.09
SMC5-203ENST00000475540 GUCA2AQ02747 115 aa14.47□□□□□ -0.09
SMC5-203ENST00000475540 SPSB2Q99619 263 aa14.47□□□□□ -0.09
SMC5-203ENST00000475540 RIC3Q7Z5B4 369 aa14.46□□□□□ -0.09
SMC5-203ENST00000475540 IL27Q8NEV9 243 aa14.46□□□□□ -0.09
SMC5-203ENST00000475540 TLL1O43897 1013 aa14.45□□□□□ -0.1
SMC5-203ENST00000475540 GJA5P36382 358 aa14.45□□□□□ -0.1
SMC5-203ENST00000475540 MYSM1Q5VVJ2 828 aa14.45□□□□□ -0.1
SMC5-203ENST00000475540 BRICD5Q6PL45 260 aa14.45□□□□□ -0.1
SMC5-203ENST00000475540 PLEKHG3A1L390 1219 aa14.44□□□□□ -0.1
SMC5-203ENST00000475540 ADH1BP00325 375 aa14.44□□□□□ -0.1
SMC5-203ENST00000475540 RSBN1LQ6PCB5 846 aaPredicted RBP14.44□□□□□ -0.1
SMC5-203ENST00000475540 THAP11Q96EK4 314 aa14.44□□□□□ -0.1
SMC5-203ENST00000475540 SPTLC1O15269 473 aa14.43□□□□□ -0.1
SMC5-203ENST00000475540 PCDHGC3Q9UN70 934 aa14.42□□□□□ -0.1
SMC5-203ENST00000475540 GGCXP38435 758 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms