RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 OXER1Q8TDS5 423 aa8.8□□□□□ -1
ECHDC1-215ENST00000475319 HPS5Q9UPZ3 1129 aa8.8□□□□□ -1
ECHDC1-215ENST00000475319 ADAM33Q9BZ11 813 aa8.8□□□□□ -1
ECHDC1-215ENST00000475319 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.8□□□□□ -1
ECHDC1-215ENST00000475319 WIPF1O43516 503 aa8.79□□□□□ -1
ECHDC1-215ENST00000475319 DSG2Q14126 1118 aa8.78□□□□□ -1
ECHDC1-215ENST00000475319 SUZ12Q15022 739 aaKnown RBP8.78□□□□□ -1
ECHDC1-215ENST00000475319 LRCH3Q96II8 777 aa8.78□□□□□ -1
ECHDC1-215ENST00000475319 NEFLP07196 543 aa8.77□□□□□ -1.01
ECHDC1-215ENST00000475319 TRIM26Q12899 539 aaPredicted RBP8.77□□□□□ -1.01
ECHDC1-215ENST00000475319 PROX2Q3B8N5 592 aa8.77□□□□□ -1.01
ECHDC1-215ENST00000475319 TJAP1Q5JTD0 557 aa8.76□□□□□ -1.01
ECHDC1-215ENST00000475319 ARID3AQ99856 593 aa8.76□□□□□ -1.01
ECHDC1-215ENST00000475319 ANO8Q9HCE9 1232 aaPredicted RBP8.76□□□□□ -1.01
ECHDC1-215ENST00000475319 ONECUT3O60422 494 aaPredicted RBP8.75□□□□□ -1.01
ECHDC1-215ENST00000475319 GGCXP38435 758 aa8.75□□□□□ -1.01
ECHDC1-215ENST00000475319 UPF1Q92900 1129 aaKnown RBP eCLIP8.75□□□□□ -1.011e-6■□□□□ 8
ECHDC1-215ENST00000475319 FAM181BA6NEQ2 426 aa8.75□□□□□ -1.01
ECHDC1-215ENST00000475319 FAM117AQ9C073 453 aa8.75□□□□□ -1.01
ECHDC1-215ENST00000475319 IL21Q9HBE4 155 aa8.75□□□□□ -1.01
ECHDC1-215ENST00000475319 KIAA1468Q9P260 1216 aa8.75□□□□□ -1.01
ECHDC1-215ENST00000475319 NACADO15069 1562 aa8.74□□□□□ -1.01
ECHDC1-215ENST00000475319 CLSPNQ9HAW4 1339 aa8.74□□□□□ -1.01
ECHDC1-215ENST00000475319 PPP1R15BQ5SWA1 713 aa8.74□□□□□ -1.01
ECHDC1-215ENST00000475319 PCGF6Q9BYE7 350 aa8.74□□□□□ -1.01
ECHDC1-215ENST00000475319 C1orf115Q9H7X2 142 aa8.74□□□□□ -1.01
ECHDC1-215ENST00000475319 DPYSL4O14531 572 aa8.73□□□□□ -1.01
ECHDC1-215ENST00000475319 PPP4CP60510 307 aa8.72□□□□□ -1.01
ECHDC1-215ENST00000475319 FAM98CQ17RN3 349 aaKnown RBP8.71□□□□□ -1.01
ECHDC1-215ENST00000475319 GPR37O15354 613 aa8.7□□□□□ -1.02
ECHDC1-215ENST00000475319 EMILIN3Q9NT22 766 aa8.7□□□□□ -1.02
ECHDC1-215ENST00000475319 PLEKHG3A1L390 1219 aa8.69□□□□□ -1.02
ECHDC1-215ENST00000475319 PDIA6Q15084 440 aa8.69□□□□□ -1.02
ECHDC1-215ENST00000475319 ARID3CA6NKF2 412 aa8.68□□□□□ -1.02
ECHDC1-215ENST00000475319 SPDYE16A6NNV3 312 aaPredicted RBP8.68□□□□□ -1.02
ECHDC1-215ENST00000475319 MTRQ99707 1265 aa8.68□□□□□ -1.02
ECHDC1-215ENST00000475319 SEPT9Q9UHD8 586 aaPredicted RBP8.68□□□□□ -1.02
ECHDC1-215ENST00000475319 TMUB1Q9BVT8 246 aa8.66□□□□□ -1.02
ECHDC1-215ENST00000475319 FAM187AA6NFU0 413 aa8.65□□□□□ -1.02
ECHDC1-215ENST00000475319 APBB1O00213 710 aa8.65□□□□□ -1.02
ECHDC1-215ENST00000475319 COL9A1P20849 921 aa8.65□□□□□ -1.02
ECHDC1-215ENST00000475319 PRR20EP86478 221 aa8.65□□□□□ -1.02
ECHDC1-215ENST00000475319 PRR20CP86479 221 aa8.65□□□□□ -1.02
ECHDC1-215ENST00000475319 PRR20DP86480 221 aa8.65□□□□□ -1.02
ECHDC1-215ENST00000475319 PRR20BP86481 221 aa8.65□□□□□ -1.02
ECHDC1-215ENST00000475319 PRR20AP86496 221 aa8.65□□□□□ -1.02
ECHDC1-215ENST00000475319 TRIM67Q6ZTA4 783 aa8.65□□□□□ -1.02
ECHDC1-215ENST00000475319 DDRGK1Q96HY6 314 aa8.65□□□□□ -1.02
ECHDC1-215ENST00000475319 MINK1Q8N4C8 1332 aaPredicted RBP8.65□□□□□ -1.02
ECHDC1-215ENST00000475319 EVI5O60447 810 aa8.64□□□□□ -1.03
ECHDC1-215ENST00000475319 PDIA4P13667 645 aaKnown RBP8.64□□□□□ -1.03
ECHDC1-215ENST00000475319 CCDC102AQ96A19 550 aa8.64□□□□□ -1.03
ECHDC1-215ENST00000475319 NFX1Q12986 1120 aaKnown RBP8.64□□□□□ -1.03
ECHDC1-215ENST00000475319 MAP2K5Q13163 448 aa8.63□□□□□ -1.03
ECHDC1-215ENST00000475319 PARP9Q8IXQ6 854 aa8.63□□□□□ -1.03
ECHDC1-215ENST00000475319 FLIIQ13045 1269 aa8.62□□□□□ -1.03
ECHDC1-215ENST00000475319 AMHR2Q16671 573 aa8.62□□□□□ -1.03
ECHDC1-215ENST00000475319 AAASQ9NRG9 546 aa8.62□□□□□ -1.03
ECHDC1-215ENST00000475319 NUTM2FA1L443 756 aa8.61□□□□□ -1.03
ECHDC1-215ENST00000475319 IRF6O14896 467 aa8.61□□□□□ -1.03
ECHDC1-215ENST00000475319 SLC19A1P41440 591 aa8.61□□□□□ -1.03
ECHDC1-215ENST00000475319 GRXCR2A6NFK2 248 aa8.59□□□□□ -1.03
ECHDC1-215ENST00000475319 PDE4CQ08493 712 aa8.59□□□□□ -1.03
ECHDC1-215ENST00000475319 ZNF516Q92618 1163 aa8.59□□□□□ -1.03
ECHDC1-215ENST00000475319 FBXW7Q969H0 707 aa8.59□□□□□ -1.03
ECHDC1-215ENST00000475319 MYO15BQ96JP2 1530 aa8.58□□□□□ -1.04
ECHDC1-215ENST00000475319 DCAF1Q9Y4B6 1507 aa8.58□□□□□ -1.04
ECHDC1-215ENST00000475319 ST8SIA5O15466 376 aa8.58□□□□□ -1.04
ECHDC1-215ENST00000475319 ZNF598Q86UK7 904 aaKnown RBP8.58□□□□□ -1.04
ECHDC1-215ENST00000475319 TRIM6-TRIM34B2RNG4 842 aa8.57□□□□□ -1.04
ECHDC1-215ENST00000475319 C11orf95C9JLR9 678 aaPredicted RBP8.57□□□□□ -1.04
ECHDC1-215ENST00000475319 NPM2Q86SE8 214 aaKnown RBP8.57□□□□□ -1.04
ECHDC1-215ENST00000475319 GNPATO15228 680 aa8.56□□□□□ -1.04
ECHDC1-215ENST00000475319 FECHP22830 423 aa8.56□□□□□ -1.04
ECHDC1-215ENST00000475319 TYW1BQ6NUM6 668 aa8.56□□□□□ -1.04
ECHDC1-215ENST00000475319 TTLL12Q14166 644 aaPredicted RBP8.55□□□□□ -1.04
ECHDC1-215ENST00000475319 GLIPR1L2Q4G1C9 344 aa8.55□□□□□ -1.04
ECHDC1-215ENST00000475319 CLUAP1Q96AJ1 413 aa8.55□□□□□ -1.04
ECHDC1-215ENST00000475319 GOPCQ9HD26 462 aa8.55□□□□□ -1.04
ECHDC1-215ENST00000475319 SALL2Q9Y467 1007 aaPredicted RBP8.55□□□□□ -1.04
ECHDC1-215ENST00000475319 SPRYD7Q5W111 196 aa8.54□□□□□ -1.04
ECHDC1-215ENST00000475319 PCDHGA10Q9Y5H3 936 aa8.54□□□□□ -1.04
ECHDC1-215ENST00000475319 OSBPP22059 807 aa8.54□□□□□ -1.04
ECHDC1-215ENST00000475319 CCDC82Q8N4S0 544 aa8.54□□□□□ -1.04
ECHDC1-215ENST00000475319 HIC1Q14526 733 aa8.53□□□□□ -1.04
ECHDC1-215ENST00000475319 NKX2-3Q8TAU0 364 aa8.53□□□□□ -1.04
ECHDC1-215ENST00000475319 A6NJR5 290 aa8.52□□□□□ -1.05
ECHDC1-215ENST00000475319 TRAK2O60296 914 aa8.52□□□□□ -1.05
ECHDC1-215ENST00000475319 MAP3K9P80192 1104 aa8.52□□□□□ -1.05
ECHDC1-215ENST00000475319 FCHSD2O94868 740 aa8.51□□□□□ -1.05
ECHDC1-215ENST00000475319 TAF7LQ5H9L4 462 aa8.51□□□□□ -1.05
ECHDC1-215ENST00000475319 MS4A1P11836 297 aa8.5□□□□□ -1.05
ECHDC1-215ENST00000475319 GIGYF2Q6Y7W6 1299 aaKnown RBP8.5□□□□□ -1.05
ECHDC1-215ENST00000475319 PCMTD1Q96MG8 357 aaPredicted RBP8.5□□□□□ -1.05
ECHDC1-215ENST00000475319 FGD1P98174 961 aa8.49□□□□□ -1.05
ECHDC1-215ENST00000475319 PACS2Q86VP3 889 aa8.49□□□□□ -1.05
ECHDC1-215ENST00000475319 CRIPAKQ8N1N5 446 aa8.49□□□□□ -1.05
ECHDC1-215ENST00000475319 TERTO14746 1132 aaKnown RBP8.49□□□□□ -1.05
ECHDC1-215ENST00000475319 PHF14O94880 888 aa8.49□□□□□ -1.05
ECHDC1-215ENST00000475319 ZNF697Q5TEC3 545 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms