RNA–Protein interactions for RNA: ENST00000474216.5

EXOSC10-207, Transcript of exosome component 10, humanhuman

TSL 2

Gene EXOSC10, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC10-207ENST00000474216 SKAP1Q86WV1 359 aa19.34■□□□□ 0.69
EXOSC10-207ENST00000474216 DUOX2Q9NRD8 1548 aa19.34■□□□□ 0.69
EXOSC10-207ENST00000474216 TRMT2AQ8IZ69 625 aaKnown RBP19.33■□□□□ 0.68
EXOSC10-207ENST00000474216 IQGAP1P46940 1657 aa19.32■□□□□ 0.68
EXOSC10-207ENST00000474216 SLFN5Q08AF3 891 aa19.32■□□□□ 0.68
EXOSC10-207ENST00000474216 STAC3Q96MF2 364 aa19.32■□□□□ 0.68
EXOSC10-207ENST00000474216 AMER1Q5JTC6 1135 aaPredicted RBP19.32■□□□□ 0.68
EXOSC10-207ENST00000474216 ANO8Q9HCE9 1232 aaPredicted RBP19.32■□□□□ 0.68
EXOSC10-207ENST00000474216 ERCC6Q03468 1493 aa19.31■□□□□ 0.68
EXOSC10-207ENST00000474216 ASXL1Q8IXJ9 1541 aa19.3■□□□□ 0.68
EXOSC10-207ENST00000474216 ABCC2Q92887 1545 aa19.3■□□□□ 0.68
EXOSC10-207ENST00000474216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.3■□□□□ 0.682e-7■■□□□ 12.8
EXOSC10-207ENST00000474216 ARHGAP5Q13017 1502 aa19.29■□□□□ 0.68
EXOSC10-207ENST00000474216 MADDQ8WXG6 1647 aa19.29■□□□□ 0.68
EXOSC10-207ENST00000474216 NGEFQ8N5V2 710 aa19.29■□□□□ 0.68
EXOSC10-207ENST00000474216 SCAPERQ9BY12 1400 aa19.28■□□□□ 0.68
EXOSC10-207ENST00000474216 NKTRP30414 1462 aaKnown RBP19.26■□□□□ 0.67
EXOSC10-207ENST00000474216 SCAF11Q99590 1463 aaKnown RBP19.26■□□□□ 0.67
EXOSC10-207ENST00000474216 SLC4A3P48751 1232 aa19.25■□□□□ 0.67
EXOSC10-207ENST00000474216 FRAT1Q92837 279 aaPredicted RBP19.25■□□□□ 0.67
EXOSC10-207ENST00000474216 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.25■□□□□ 0.67
EXOSC10-207ENST00000474216 RTN4Q9NQC3 1192 aaKnown RBP19.25■□□□□ 0.67
EXOSC10-207ENST00000474216 TTC37Q6PGP7 1564 aa19.25■□□□□ 0.67
EXOSC10-207ENST00000474216 NINLQ9Y2I6 1382 aa19.24■□□□□ 0.67
EXOSC10-207ENST00000474216 VIRMAQ69YN4 1812 aaKnown RBP19.22■□□□□ 0.67
EXOSC10-207ENST00000474216 E9PSI1 815 aa19.22■□□□□ 0.67
EXOSC10-207ENST00000474216 SLC24A1O60721 1099 aa19.22■□□□□ 0.67
EXOSC10-207ENST00000474216 SPHKAPQ2M3C7 1700 aa19.22■□□□□ 0.67
EXOSC10-207ENST00000474216 PRKCSHP14314 528 aaPredicted RBP19.21■□□□□ 0.67
EXOSC10-207ENST00000474216 BRPF3Q9ULD4 1205 aa19.21■□□□□ 0.67
EXOSC10-207ENST00000474216 MYOM1P52179 1685 aa19.2■□□□□ 0.66
EXOSC10-207ENST00000474216 CGNL1Q0VF96 1302 aa19.19■□□□□ 0.66
EXOSC10-207ENST00000474216 TRPM2O94759 1503 aa19.19■□□□□ 0.66
EXOSC10-207ENST00000474216 RGS3P49796 1198 aa19.19■□□□□ 0.66
EXOSC10-207ENST00000474216 PDE3AQ14432 1141 aa19.19■□□□□ 0.66
EXOSC10-207ENST00000474216 KIAA1210Q9ULL0 1709 aa19.18■□□□□ 0.66
EXOSC10-207ENST00000474216 CEP152O94986 1710 aa19.18■□□□□ 0.66
EXOSC10-207ENST00000474216 MAPK8IP3Q9UPT6 1336 aa19.18■□□□□ 0.66
EXOSC10-207ENST00000474216 KDM5AP29375 1690 aaKnown RBP19.17■□□□□ 0.66
EXOSC10-207ENST00000474216 PTPRTO14522 1441 aa19.17■□□□□ 0.66
EXOSC10-207ENST00000474216 FRAT2O75474 233 aaPredicted RBP19.16■□□□□ 0.66
EXOSC10-207ENST00000474216 APAF1O14727 1248 aa19.15■□□□□ 0.66
EXOSC10-207ENST00000474216 AAMPQ13685 434 aa19.15■□□□□ 0.66
EXOSC10-207ENST00000474216 NEURL4Q96JN8 1562 aa19.15■□□□□ 0.66
EXOSC10-207ENST00000474216 SPINK5Q9NQ38 1064 aaPredicted RBP19.14■□□□□ 0.65
EXOSC10-207ENST00000474216 USP19O94966 1318 aa19.14■□□□□ 0.65
EXOSC10-207ENST00000474216 ZMYM3Q14202 1370 aa19.14■□□□□ 0.65
EXOSC10-207ENST00000474216 BCAR3O75815 825 aa19.13■□□□□ 0.65
EXOSC10-207ENST00000474216 BECN1Q14457 450 aa19.13■□□□□ 0.65
EXOSC10-207ENST00000474216 CCDC146Q8IYE0 955 aa19.13■□□□□ 0.65
EXOSC10-207ENST00000474216 PLCH2O75038 1416 aa19.13■□□□□ 0.65
EXOSC10-207ENST00000474216 IGHDP01880 384 aa19.12■□□□□ 0.65
EXOSC10-207ENST00000474216 CLUAP1Q96AJ1 413 aa19.11■□□□□ 0.65
EXOSC10-207ENST00000474216 ABCC1P33527 1531 aa19.1■□□□□ 0.65
EXOSC10-207ENST00000474216 RTEL1-TNFRSF6BF6WH68 1400 aa19.1■□□□□ 0.65
EXOSC10-207ENST00000474216 CENPJQ9HC77 1338 aaPredicted RBP19.1■□□□□ 0.65
EXOSC10-207ENST00000474216 FAM43AQ8N2R8 423 aa19.1■□□□□ 0.65
EXOSC10-207ENST00000474216 CLTCL1P53675 1640 aa19.09■□□□□ 0.65
EXOSC10-207ENST00000474216 POLR3AO14802 1390 aaPredicted RBP19.09■□□□□ 0.65
EXOSC10-207ENST00000474216 EFCAB2Q5VUJ9 269 aa19.09■□□□□ 0.65
EXOSC10-207ENST00000474216 SHROOM2Q13796 1616 aa19.08■□□□□ 0.64
EXOSC10-207ENST00000474216 PMFBP1Q8TBY8 1022 aa19.07■□□□□ 0.64
EXOSC10-207ENST00000474216 DEPDC5O75140 1603 aa19.06■□□□□ 0.64
EXOSC10-207ENST00000474216 TET3O43151 1660 aa19.06■□□□□ 0.64
EXOSC10-207ENST00000474216 ERVK-7P63135 1459 aa19.06■□□□□ 0.64
EXOSC10-207ENST00000474216 MYOM2P54296 1465 aa19.05■□□□□ 0.64
EXOSC10-207ENST00000474216 WWC1Q8IX03 1113 aa19.05■□□□□ 0.64
EXOSC10-207ENST00000474216 NLRP1Q9C000 1473 aa19.04■□□□□ 0.64
EXOSC10-207ENST00000474216 CANXP27824 592 aaKnown RBP19.03■□□□□ 0.64
EXOSC10-207ENST00000474216 TRAPPC8Q9Y2L5 1435 aa19.03■□□□□ 0.64
EXOSC10-207ENST00000474216 SBNO2Q9Y2G9 1366 aa19.02■□□□□ 0.64
EXOSC10-207ENST00000474216 DMRT2Q9Y5R5 561 aa19.02■□□□□ 0.64
EXOSC10-207ENST00000474216 L1TD1Q5T7N2 865 aaKnown RBP19.01■□□□□ 0.63
EXOSC10-207ENST00000474216 COG6Q9Y2V7 657 aa19.01■□□□□ 0.63
EXOSC10-207ENST00000474216 MAP3K4Q9Y6R4 1608 aa19.01■□□□□ 0.63
EXOSC10-207ENST00000474216 VWDEQ8N2E2 1590 aa19.01■□□□□ 0.63
EXOSC10-207ENST00000474216 MYO3AQ8NEV4 1616 aa19.01■□□□□ 0.63
EXOSC10-207ENST00000474216 SEC24BO95487 1268 aa19.01■□□□□ 0.63
EXOSC10-207ENST00000474216 NCBP3Q53F19 620 aaKnown RBP19.01■□□□□ 0.63
EXOSC10-207ENST00000474216 CARD14Q9BXL6 1004 aa19.01■□□□□ 0.63
EXOSC10-207ENST00000474216 UPF2Q9HAU5 1272 aaKnown RBP19.01■□□□□ 0.63
EXOSC10-207ENST00000474216 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.01■□□□□ 0.63
EXOSC10-207ENST00000474216 ARAP3Q8WWN8 1544 aa19■□□□□ 0.63
EXOSC10-207ENST00000474216 RSPH6AQ9H0K4 717 aa19■□□□□ 0.63
EXOSC10-207ENST00000474216 SPAG9O60271 1321 aaKnown RBP19■□□□□ 0.63
EXOSC10-207ENST00000474216 KANK1Q14678 1352 aa19■□□□□ 0.63
EXOSC10-207ENST00000474216 PANK1Q8TE04 598 aa19■□□□□ 0.63
EXOSC10-207ENST00000474216 ZFYVE16Q7Z3T8 1539 aa18.99■□□□□ 0.63
EXOSC10-207ENST00000474216 WDR63Q8IWG1 891 aa18.99■□□□□ 0.63
EXOSC10-207ENST00000474216 ANTXR1Q9H6X2 564 aa18.99■□□□□ 0.63
EXOSC10-207ENST00000474216 RARSP54136 660 aaKnown RBP18.98■□□□□ 0.63
EXOSC10-207ENST00000474216 RUNDC1Q96C34 613 aa18.98■□□□□ 0.63
EXOSC10-207ENST00000474216 PHF23Q9BUL5 403 aaPredicted RBP18.98■□□□□ 0.63
EXOSC10-207ENST00000474216 TBC1D32Q96NH3 1257 aa18.98■□□□□ 0.63
EXOSC10-207ENST00000474216 ABCA6Q8N139 1617 aa18.98■□□□□ 0.63
EXOSC10-207ENST00000474216 IQSEC2Q5JU85 1478 aa18.97■□□□□ 0.63
EXOSC10-207ENST00000474216 SHPRHQ149N8 1683 aa18.97■□□□□ 0.63
EXOSC10-207ENST00000474216 CCDC27Q2M243 656 aa18.96■□□□□ 0.63
EXOSC10-207ENST00000474216 RWDD1Q9H446 243 aaPredicted RBP18.95■□□□□ 0.62
EXOSC10-207ENST00000474216 POGKQ9P215 609 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms