RNA–Protein interactions for RNA: ENST00000472822.5

KDM5B-207, Transcript of lysine demethylase 5B, humanhuman

TSL 1 (best)

Gene KDM5B, Length 1,648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5B-207ENST00000472822 TRPM1Q7Z4N2 1603 aa13.06□□□□□ -0.32
KDM5B-207ENST00000472822 MYOM2P54296 1465 aa13.06□□□□□ -0.32
KDM5B-207ENST00000472822 RALGAPBQ86X10 1494 aa13.06□□□□□ -0.32
KDM5B-207ENST00000472822 NRXN1Q9ULB1 1477 aa13.06□□□□□ -0.32
KDM5B-207ENST00000472822 NBPF1Q3BBV0 1214 aa13.05□□□□□ -0.32
KDM5B-207ENST00000472822 RPGRIP1LQ68CZ1 1315 aa13.05□□□□□ -0.32
KDM5B-207ENST00000472822 NUTM2DQ5VT03 806 aaPredicted RBP13.04□□□□□ -0.32
KDM5B-207ENST00000472822 STAC3Q96MF2 364 aa13.03□□□□□ -0.32
KDM5B-207ENST00000472822 UBR1Q8IWV7 1749 aa13.03□□□□□ -0.32
KDM5B-207ENST00000472822 PTPRMP28827 1452 aa13.03□□□□□ -0.32
KDM5B-207ENST00000472822 ZNF316A6NFI3 1004 aaPredicted RBP13.02□□□□□ -0.32
KDM5B-207ENST00000472822 HIRIP3Q9BW71 556 aaPredicted RBP13.02□□□□□ -0.32
KDM5B-207ENST00000472822 NLRP1Q9C000 1473 aa13.02□□□□□ -0.32
KDM5B-207ENST00000472822 KDM4FA0A1W2PPD8 638 aa13.02□□□□□ -0.33
KDM5B-207ENST00000472822 ZFYVE9O95405 1425 aa13.02□□□□□ -0.33
KDM5B-207ENST00000472822 KDM5AP29375 1690 aaKnown RBP13.01□□□□□ -0.33
KDM5B-207ENST00000472822 GPRASP1Q5JY77 1395 aa13.01□□□□□ -0.33
KDM5B-207ENST00000472822 MYO3AQ8NEV4 1616 aa13.01□□□□□ -0.33
KDM5B-207ENST00000472822 PIK3C2GO75747 1445 aa13□□□□□ -0.33
KDM5B-207ENST00000472822 HSPA5P11021 654 aaKnown RBP13□□□□□ -0.33
KDM5B-207ENST00000472822 CFAP70Q5T0N1 1121 aa13□□□□□ -0.33
KDM5B-207ENST00000472822 RIMS2Q9UQ26 1411 aa12.99□□□□□ -0.33
KDM5B-207ENST00000472822 STAG3Q9UJ98 1225 aa12.99□□□□□ -0.33
KDM5B-207ENST00000472822 KIAA1210Q9ULL0 1709 aa12.98□□□□□ -0.33
KDM5B-207ENST00000472822 SETD1BQ9UPS6 1966 aaKnown RBP12.98□□□□□ -0.33
KDM5B-207ENST00000472822 ROCK2O75116 1388 aaKnown RBP12.98□□□□□ -0.33
KDM5B-207ENST00000472822 TMEM2Q9UHN6 1383 aa12.98□□□□□ -0.33
KDM5B-207ENST00000472822 VGFO15240 615 aaPredicted RBP12.98□□□□□ -0.33
KDM5B-207ENST00000472822 C14orf93Q9H972 538 aaKnown RBP12.98□□□□□ -0.33
KDM5B-207ENST00000472822 CARD11Q9BXL7 1154 aa12.97□□□□□ -0.33
KDM5B-207ENST00000472822 LAMC1P11047 1609 aa12.97□□□□□ -0.33
KDM5B-207ENST00000472822 LTKP29376 864 aa12.96□□□□□ -0.33
KDM5B-207ENST00000472822 EIF4G2P78344 907 aaKnown RBP eCLIP12.96□□□□□ -0.33
KDM5B-207ENST00000472822 ARHGAP23Q9P227 1491 aa12.96□□□□□ -0.33
KDM5B-207ENST00000472822 USP47Q96K76 1375 aa12.96□□□□□ -0.34
KDM5B-207ENST00000472822 CEP170BQ9Y4F5 1589 aaPredicted RBP12.96□□□□□ -0.34
KDM5B-207ENST00000472822 ADGRB1O14514 1584 aa12.95□□□□□ -0.34
KDM5B-207ENST00000472822 C11orf95C9JLR9 678 aaPredicted RBP12.95□□□□□ -0.34
KDM5B-207ENST00000472822 SLIT1O75093 1534 aa12.94□□□□□ -0.34
KDM5B-207ENST00000472822 ZNF142P52746 1687 aaPredicted RBP12.94□□□□□ -0.34
KDM5B-207ENST00000472822 NRXN3Q9Y4C0 1643 aa12.94□□□□□ -0.34
KDM5B-207ENST00000472822 ASXL1Q8IXJ9 1541 aa12.94□□□□□ -0.34
KDM5B-207ENST00000472822 TMEM132EQ6IEE7 984 aa12.93□□□□□ -0.34
KDM5B-207ENST00000472822 IQGAP1P46940 1657 aa12.93□□□□□ -0.34
KDM5B-207ENST00000472822 SETBP1Q9Y6X0 1596 aa12.93□□□□□ -0.34
KDM5B-207ENST00000472822 THEMISQ8N1K5 641 aaPredicted RBP12.92□□□□□ -0.34
KDM5B-207ENST00000472822 ALKQ9UM73 1620 aa12.92□□□□□ -0.34
KDM5B-207ENST00000472822 SETD1AO15047 1707 aaKnown RBP12.92□□□□□ -0.34
KDM5B-207ENST00000472822 ST20-MTHFSA0A0A6YYL1 179 aa12.91□□□□□ -0.34
KDM5B-207ENST00000472822 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.91□□□□□ -0.34
KDM5B-207ENST00000472822 TXNDC2Q86VQ3 553 aa12.91□□□□□ -0.34
KDM5B-207ENST00000472822 SCAF11Q99590 1463 aaKnown RBP12.9□□□□□ -0.34
KDM5B-207ENST00000472822 TESK2Q96S53 571 aa12.89□□□□□ -0.35
KDM5B-207ENST00000472822 ADAMTS13Q76LX8 1427 aa12.89□□□□□ -0.35
KDM5B-207ENST00000472822 WASHC2AQ641Q2 1341 aa12.88□□□□□ -0.35
KDM5B-207ENST00000472822 MED14O60244 1454 aa12.88□□□□□ -0.35
KDM5B-207ENST00000472822 PLEKHG1Q9ULL1 1385 aa12.88□□□□□ -0.35
KDM5B-207ENST00000472822 HDGFP51858 240 aaKnown RBP12.88□□□□□ -0.35
KDM5B-207ENST00000472822 METP08581 1390 aa12.86□□□□□ -0.35
KDM5B-207ENST00000472822 TRAK1Q9UPV9 953 aa12.85□□□□□ -0.35
KDM5B-207ENST00000472822 EID1Q9Y6B2 187 aa12.85□□□□□ -0.35
KDM5B-207ENST00000472822 YTHDC2Q9H6S0 1430 aaKnown RBP12.85□□□□□ -0.35
KDM5B-207ENST00000472822 KIF7Q2M1P5 1343 aa12.84□□□□□ -0.35
KDM5B-207ENST00000472822 CCDC7Q96M83 1385 aa12.84□□□□□ -0.35
KDM5B-207ENST00000472822 SLC26A8Q96RN1 970 aa12.84□□□□□ -0.35
KDM5B-207ENST00000472822 ARHGEF28Q8N1W1 1705 aaKnown RBP12.83□□□□□ -0.35
KDM5B-207ENST00000472822 ANKLE2Q86XL3 938 aa12.83□□□□□ -0.36
KDM5B-207ENST00000472822 STK26Q9P289 416 aa12.83□□□□□ -0.36
KDM5B-207ENST00000472822 POLR1AO95602 1720 aaPredicted RBP12.83□□□□□ -0.36
KDM5B-207ENST00000472822 LRPPRCP42704 1394 aaKnown RBP12.82□□□□□ -0.36
KDM5B-207ENST00000472822 DISP3Q9P2K9 1392 aa12.82□□□□□ -0.36
KDM5B-207ENST00000472822 PTPRUQ92729 1446 aa12.82□□□□□ -0.36
KDM5B-207ENST00000472822 DDX10Q13206 875 aaKnown RBP12.81□□□□□ -0.36
KDM5B-207ENST00000472822 DIEXFQ68CQ4 756 aaKnown RBP12.81□□□□□ -0.36
KDM5B-207ENST00000472822 TBX22Q9Y458 520 aa12.81□□□□□ -0.36
KDM5B-207ENST00000472822 NCKAP5LQ9HCH0 1330 aa12.81□□□□□ -0.36
KDM5B-207ENST00000472822 LMTK3Q96Q04 1460 aa12.81□□□□□ -0.36
KDM5B-207ENST00000472822 BCANQ96GW7 911 aa12.8□□□□□ -0.36
KDM5B-207ENST00000472822 ABCC11Q96J66 1382 aa12.8□□□□□ -0.36
KDM5B-207ENST00000472822 CENPJQ9HC77 1338 aaPredicted RBP12.8□□□□□ -0.36
KDM5B-207ENST00000472822 HSPA2P54652 639 aa12.8□□□□□ -0.36
KDM5B-207ENST00000472822 EIF3AQ14152 1382 aaKnown RBP12.79□□□□□ -0.36
KDM5B-207ENST00000472822 PLEKHH1Q9ULM0 1364 aa12.79□□□□□ -0.36
KDM5B-207ENST00000472822 QRICH2Q9H0J4 1663 aa12.79□□□□□ -0.36
KDM5B-207ENST00000472822 DLC1Q96QB1 1528 aa12.79□□□□□ -0.36
KDM5B-207ENST00000472822 TECPR2O15040 1411 aa12.78□□□□□ -0.36
KDM5B-207ENST00000472822 SBNO2Q9Y2G9 1366 aa12.78□□□□□ -0.36
KDM5B-207ENST00000472822 WAPLQ7Z5K2 1190 aa12.77□□□□□ -0.36
KDM5B-207ENST00000472822 PRAM1Q96QH2 718 aa12.77□□□□□ -0.36
KDM5B-207ENST00000472822 DIP2AQ14689 1571 aa12.77□□□□□ -0.36
KDM5B-207ENST00000472822 KNDC1Q76NI1 1749 aa12.77□□□□□ -0.37
KDM5B-207ENST00000472822 NPHP4O75161 1426 aaPredicted RBP12.77□□□□□ -0.37
KDM5B-207ENST00000472822 ROBO2Q9HCK4 1378 aa12.76□□□□□ -0.37
KDM5B-207ENST00000472822 TMF1P82094 1093 aa12.76□□□□□ -0.37
KDM5B-207ENST00000472822 SAFB2Q14151 953 aaKnown RBP eCLIP12.76□□□□□ -0.37
KDM5B-207ENST00000472822 CPS1P31327 1500 aa12.75□□□□□ -0.37
KDM5B-207ENST00000472822 SIRT1Q96EB6 747 aa12.75□□□□□ -0.37
KDM5B-207ENST00000472822 TULP4Q9NRJ4 1543 aa12.75□□□□□ -0.37
KDM5B-207ENST00000472822 STRCQ7RTU9 1775 aa12.74□□□□□ -0.37
KDM5B-207ENST00000472822 AMOTL2Q9Y2J4 779 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms