RNA–Protein interactions for RNA: ENST00000471259.1

MRPL40-203, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-203ENST00000471259 ADGRB3O60242 1522 aa17.62■□□□□ 0.41
MRPL40-203ENST00000471259 PPP1R15AO75807 674 aaPredicted RBP17.62■□□□□ 0.41
MRPL40-203ENST00000471259 POTEAQ6S8J7 498 aa17.62■□□□□ 0.41
MRPL40-203ENST00000471259 NOS1P29475 1434 aa17.62■□□□□ 0.41
MRPL40-203ENST00000471259 RPRD2Q5VT52 1461 aaKnown RBP17.62■□□□□ 0.41
MRPL40-203ENST00000471259 NCOA3Q9Y6Q9 1424 aa17.61■□□□□ 0.41
MRPL40-203ENST00000471259 NWD1Q149M9 1564 aa17.61■□□□□ 0.41
MRPL40-203ENST00000471259 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.6■□□□□ 0.41
MRPL40-203ENST00000471259 CHIC2Q9UKJ5 165 aa17.6■□□□□ 0.41
MRPL40-203ENST00000471259 FGD6Q6ZV73 1430 aa17.6■□□□□ 0.41
MRPL40-203ENST00000471259 POTEDQ86YR6 584 aa17.59■□□□□ 0.41
MRPL40-203ENST00000471259 PLEKHG1Q9ULL1 1385 aa17.58■□□□□ 0.4
MRPL40-203ENST00000471259 PHLPP1O60346 1717 aa17.58■□□□□ 0.4
MRPL40-203ENST00000471259 SPATA31A6Q5VVP1 1343 aa17.57■□□□□ 0.4
MRPL40-203ENST00000471259 C14orf37Q86TY3 774 aa17.57■□□□□ 0.4
MRPL40-203ENST00000471259 LOC105371045A0A1W2PR82 267 aa17.56■□□□□ 0.4
MRPL40-203ENST00000471259 ZNF772Q68DY9 489 aaPredicted RBP17.56■□□□□ 0.4
MRPL40-203ENST00000471259 TBX22Q9Y458 520 aa17.56■□□□□ 0.4
MRPL40-203ENST00000471259 MEX3CQ5U5Q3 659 aaKnown RBP17.55■□□□□ 0.4
MRPL40-203ENST00000471259 CADPS2Q86UW7 1296 aa17.55■□□□□ 0.4
MRPL40-203ENST00000471259 RBM33Q96EV2 1170 aaKnown RBP17.55■□□□□ 0.4
MRPL40-203ENST00000471259 ADGRL2O95490 1459 aa17.54■□□□□ 0.4
MRPL40-203ENST00000471259 ATF3P18847 181 aa17.53■□□□□ 0.4
MRPL40-203ENST00000471259 CHD2O14647 1828 aaKnown RBP17.53■□□□□ 0.4
MRPL40-203ENST00000471259 ANKRD50Q9ULJ7 1429 aa17.53■□□□□ 0.4
MRPL40-203ENST00000471259 RIMS2Q9UQ26 1411 aa17.53■□□□□ 0.4
MRPL40-203ENST00000471259 MSH5O43196 834 aa17.52■□□□□ 0.4
MRPL40-203ENST00000471259 PIK3R4Q99570 1358 aa17.52■□□□□ 0.39
MRPL40-203ENST00000471259 ZFYVE9O95405 1425 aa17.51■□□□□ 0.39
MRPL40-203ENST00000471259 C19orf44Q9H6X5 657 aa17.51■□□□□ 0.39
MRPL40-203ENST00000471259 CHGAP10645 457 aaKnown RBP17.5■□□□□ 0.39
MRPL40-203ENST00000471259 FAM50AQ14320 339 aaKnown RBP17.49■□□□□ 0.39
MRPL40-203ENST00000471259 DIP2AQ14689 1571 aa17.49■□□□□ 0.39
MRPL40-203ENST00000471259 GCC2Q8IWJ2 1684 aa17.47■□□□□ 0.39
MRPL40-203ENST00000471259 TMEM131LA2VDJ0 1609 aa17.46■□□□□ 0.39
MRPL40-203ENST00000471259 COL16A1Q07092 1604 aaPredicted RBP17.46■□□□□ 0.39
MRPL40-203ENST00000471259 AHDC1Q5TGY3 1603 aaPredicted RBP17.44■□□□□ 0.38
MRPL40-203ENST00000471259 RXRBP28702 533 aa17.44■□□□□ 0.38
MRPL40-203ENST00000471259 MYO5BQ9ULV0 1848 aa17.44■□□□□ 0.38
MRPL40-203ENST00000471259 SHPRHQ149N8 1683 aa17.42■□□□□ 0.38
MRPL40-203ENST00000471259 TRPM2O94759 1503 aa17.42■□□□□ 0.38
MRPL40-203ENST00000471259 DCCP43146 1447 aa17.41■□□□□ 0.38
MRPL40-203ENST00000471259 UPF1Q92900 1129 aaKnown RBP eCLIP17.41■□□□□ 0.38
MRPL40-203ENST00000471259 AMOTL2Q9Y2J4 779 aa17.41■□□□□ 0.38
MRPL40-203ENST00000471259 SETD1AO15047 1707 aaKnown RBP17.41■□□□□ 0.38
MRPL40-203ENST00000471259 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.41■□□□□ 0.38
MRPL40-203ENST00000471259 TRIM52Q96A61 297 aa17.4■□□□□ 0.38
MRPL40-203ENST00000471259 ADAMTS13Q76LX8 1427 aa17.39■□□□□ 0.38
MRPL40-203ENST00000471259 CDK12Q9NYV4 1490 aaPredicted RBP17.39■□□□□ 0.37
MRPL40-203ENST00000471259 UNC13BO14795 1591 aa17.39■□□□□ 0.37
MRPL40-203ENST00000471259 LRRC59Q96AG4 307 aaKnown RBP17.38■□□□□ 0.37
MRPL40-203ENST00000471259 LRP6O75581 1613 aa17.38■□□□□ 0.37
MRPL40-203ENST00000471259 BRINP3Q76B58 766 aa17.37■□□□□ 0.37
MRPL40-203ENST00000471259 ROCK1Q13464 1354 aa17.37■□□□□ 0.37
MRPL40-203ENST00000471259 NUTM2BA6NNL0 878 aaPredicted RBP17.36■□□□□ 0.37
MRPL40-203ENST00000471259 NUTM2EB1AL46 878 aaPredicted RBP17.36■□□□□ 0.37
MRPL40-203ENST00000471259 NUTM2DQ5VT03 806 aaPredicted RBP17.36■□□□□ 0.37
MRPL40-203ENST00000471259 NUTM2AQ8IVF1 878 aaPredicted RBP17.36■□□□□ 0.37
MRPL40-203ENST00000471259 E9PCH4 1651 aa17.34■□□□□ 0.37
MRPL40-203ENST00000471259 SETD5Q9C0A6 1442 aa17.34■□□□□ 0.37
MRPL40-203ENST00000471259 IQGAP3Q86VI3 1631 aa17.33■□□□□ 0.37
MRPL40-203ENST00000471259 NUP155O75694 1391 aa17.33■□□□□ 0.36
MRPL40-203ENST00000471259 AFF2P51816 1311 aa17.32■□□□□ 0.36
MRPL40-203ENST00000471259 ZNF326Q5BKZ1 582 aaKnown RBP17.31■□□□□ 0.36
MRPL40-203ENST00000471259 ASXL1Q8IXJ9 1541 aa17.31■□□□□ 0.36
MRPL40-203ENST00000471259 RBM6P78332 1123 aaKnown RBP17.3■□□□□ 0.36
MRPL40-203ENST00000471259 NGLY1Q96IV0 654 aa17.3■□□□□ 0.36
MRPL40-203ENST00000471259 SETBP1Q9Y6X0 1596 aa17.28■□□□□ 0.36
MRPL40-203ENST00000471259 QTRT2Q9H974 415 aaKnown RBP17.28■□□□□ 0.36
MRPL40-203ENST00000471259 MST1RQ04912 1400 aa17.28■□□□□ 0.36
MRPL40-203ENST00000471259 PTPRUQ92729 1446 aa17.28■□□□□ 0.36
MRPL40-203ENST00000471259 C8orf37Q96NL8 207 aa17.27■□□□□ 0.36
MRPL40-203ENST00000471259 NHSL1Q5SYE7 1610 aa17.27■□□□□ 0.36
MRPL40-203ENST00000471259 XRN1Q8IZH2 1706 aaKnown RBP17.26■□□□□ 0.35
MRPL40-203ENST00000471259 ADGRL3Q9HAR2 1447 aa17.25■□□□□ 0.35
MRPL40-203ENST00000471259 SPHKAPQ2M3C7 1700 aa17.22■□□□□ 0.35
MRPL40-203ENST00000471259 PNPLA6Q8IY17 1366 aa17.22■□□□□ 0.35
MRPL40-203ENST00000471259 METP08581 1390 aa17.21■□□□□ 0.35
MRPL40-203ENST00000471259 ATAD2Q6PL18 1390 aa17.21■□□□□ 0.35
MRPL40-203ENST00000471259 NRXN3Q9Y4C0 1643 aa17.21■□□□□ 0.35
MRPL40-203ENST00000471259 VGFO15240 615 aaPredicted RBP17.2■□□□□ 0.34
MRPL40-203ENST00000471259 TRPC5Q9UL62 973 aaPredicted RBP17.2■□□□□ 0.34
MRPL40-203ENST00000471259 ITGAEP38570 1179 aa17.19■□□□□ 0.34
MRPL40-203ENST00000471259 RGS12O14924 1447 aa17.19■□□□□ 0.34
MRPL40-203ENST00000471259 C1orf167Q5SNV9 1468 aa17.18■□□□□ 0.34
MRPL40-203ENST00000471259 ADAMTS2O95450 1211 aa17.17■□□□□ 0.34
MRPL40-203ENST00000471259 PTCH1Q13635 1447 aa17.17■□□□□ 0.34
MRPL40-203ENST00000471259 USP21Q9UK80 565 aa17.17■□□□□ 0.34
MRPL40-203ENST00000471259 CCDC125Q86Z20 511 aa17.16■□□□□ 0.34
MRPL40-203ENST00000471259 KIF1BO60333 1816 aa17.15■□□□□ 0.34
MRPL40-203ENST00000471259 ZRANB1Q9UGI0 708 aa17.15■□□□□ 0.34
MRPL40-203ENST00000471259 SOS2Q07890 1332 aaPredicted RBP17.15■□□□□ 0.34
MRPL40-203ENST00000471259 RPGRIP1LQ68CZ1 1315 aa17.15■□□□□ 0.34
MRPL40-203ENST00000471259 NALCNQ8IZF0 1738 aa17.14■□□□□ 0.33
MRPL40-203ENST00000471259 DDX17Q92841 729 aaKnown RBP17.14■□□□□ 0.33
MRPL40-203ENST00000471259 NEXMIFQ5QGS0 1516 aa17.14■□□□□ 0.33
MRPL40-203ENST00000471259 LAMC1P11047 1609 aa17.14■□□□□ 0.33
MRPL40-203ENST00000471259 FNBP4Q8N3X1 1017 aaPredicted RBP17.13■□□□□ 0.33
MRPL40-203ENST00000471259 NPHP3Q7Z494 1330 aa17.13■□□□□ 0.33
MRPL40-203ENST00000471259 HFM1A2PYH4 1435 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms