RNA–Protein interactions for RNA: ENST00000470771.1

ABCA4-204, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 3

Gene ABCA4, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-204ENST00000470771 RIMS2Q9UQ26 1411 aa20.67■□□□□ 0.9
ABCA4-204ENST00000470771 IQGAP3Q86VI3 1631 aa20.67■□□□□ 0.9
ABCA4-204ENST00000470771 PLEKHG1Q9ULL1 1385 aa20.66■□□□□ 0.9
ABCA4-204ENST00000470771 STRCP1A6NGW2 1772 aa20.65■□□□□ 0.9
ABCA4-204ENST00000470771 TBX22Q9Y458 520 aa20.64■□□□□ 0.89
ABCA4-204ENST00000470771 ZFYVE9O95405 1425 aa20.63■□□□□ 0.89
ABCA4-204ENST00000470771 TMEM94Q12767 1356 aa20.63■□□□□ 0.89
ABCA4-204ENST00000470771 SENP3Q9H4L4 574 aaPredicted RBP20.63■□□□□ 0.89
ABCA4-204ENST00000470771 E9PCH4 1651 aa20.62■□□□□ 0.89
ABCA4-204ENST00000470771 TMEM131LA2VDJ0 1609 aa20.62■□□□□ 0.89
ABCA4-204ENST00000470771 TRIM52Q96A61 297 aa20.61■□□□□ 0.89
ABCA4-204ENST00000470771 ZNF326Q5BKZ1 582 aaKnown RBP20.59■□□□□ 0.89
ABCA4-204ENST00000470771 NUTM2DQ5VT03 806 aaPredicted RBP20.59■□□□□ 0.89
ABCA4-204ENST00000470771 ILDR2Q71H61 639 aa20.59■□□□□ 0.89
ABCA4-204ENST00000470771 NAIPQ13075 1403 aa20.59■□□□□ 0.89
ABCA4-204ENST00000470771 NKTRP30414 1462 aaKnown RBP20.57■□□□□ 0.88
ABCA4-204ENST00000470771 MSH6P52701 1360 aa20.57■□□□□ 0.88
ABCA4-204ENST00000470771 RBM33Q96EV2 1170 aaKnown RBP20.56■□□□□ 0.88
ABCA4-204ENST00000470771 C14orf37Q86TY3 774 aa20.55■□□□□ 0.88
ABCA4-204ENST00000470771 ALKQ9UM73 1620 aa20.55■□□□□ 0.88
ABCA4-204ENST00000470771 FAM135BQ49AJ0 1406 aa20.54■□□□□ 0.88
ABCA4-204ENST00000470771 SOCS7O14512 581 aa20.54■□□□□ 0.88
ABCA4-204ENST00000470771 PIK3R4Q99570 1358 aa20.54■□□□□ 0.88
ABCA4-204ENST00000470771 HFM1A2PYH4 1435 aa20.53■□□□□ 0.88
ABCA4-204ENST00000470771 MYO5BQ9ULV0 1848 aa20.53■□□□□ 0.88
ABCA4-204ENST00000470771 PHF23Q9BUL5 403 aaPredicted RBP20.53■□□□□ 0.88
ABCA4-204ENST00000470771 SLC4A1APQ9BWU0 796 aaKnown RBP20.53■□□□□ 0.88
ABCA4-204ENST00000470771 SLAIN2Q9P270 581 aa20.52■□□□□ 0.88
ABCA4-204ENST00000470771 NCOA3Q9Y6Q9 1424 aa20.51■□□□□ 0.87
ABCA4-204ENST00000470771 NWD1Q149M9 1564 aa20.5■□□□□ 0.87
ABCA4-204ENST00000470771 AMOTL2Q9Y2J4 779 aa20.49■□□□□ 0.87
ABCA4-204ENST00000470771 XIRP1Q702N8 1843 aaKnown RBP20.48■□□□□ 0.87
ABCA4-204ENST00000470771 DIP2AQ14689 1571 aa20.48■□□□□ 0.87
ABCA4-204ENST00000470771 ADAMTS13Q76LX8 1427 aa20.48■□□□□ 0.87
ABCA4-204ENST00000470771 ATF3P18847 181 aa20.48■□□□□ 0.87
ABCA4-204ENST00000470771 C19orf44Q9H6X5 657 aa20.48■□□□□ 0.87
ABCA4-204ENST00000470771 ACIN1Q9UKV3 1341 aaKnown RBP20.48■□□□□ 0.87
ABCA4-204ENST00000470771 SPHKAPQ2M3C7 1700 aa20.47■□□□□ 0.87
ABCA4-204ENST00000470771 CADPS2Q86UW7 1296 aa20.47■□□□□ 0.87
ABCA4-204ENST00000470771 CHD2O14647 1828 aaKnown RBP20.46■□□□□ 0.87
ABCA4-204ENST00000470771 VGFO15240 615 aaPredicted RBP20.46■□□□□ 0.87
ABCA4-204ENST00000470771 TRPM2O94759 1503 aa20.44■□□□□ 0.86
ABCA4-204ENST00000470771 MED1Q15648 1581 aaPredicted RBP20.44■□□□□ 0.86
ABCA4-204ENST00000470771 RPGRIP1LQ68CZ1 1315 aa20.42■□□□□ 0.86
ABCA4-204ENST00000470771 SETBP1Q9Y6X0 1596 aa20.38■□□□□ 0.85
ABCA4-204ENST00000470771 MPHOSPH9Q99550 1183 aa20.37■□□□□ 0.85
ABCA4-204ENST00000470771 ROBO1Q9Y6N7 1651 aa20.37■□□□□ 0.85
ABCA4-204ENST00000470771 CLTCL1P53675 1640 aa20.37■□□□□ 0.85
ABCA4-204ENST00000470771 PTPRUQ92729 1446 aa20.36■□□□□ 0.85
ABCA4-204ENST00000470771 METP08581 1390 aa20.35■□□□□ 0.85
ABCA4-204ENST00000470771 KIF1BO60333 1816 aa20.35■□□□□ 0.85
ABCA4-204ENST00000470771 FOXD1Q16676 465 aa20.33■□□□□ 0.85
ABCA4-204ENST00000470771 NEXMIFQ5QGS0 1516 aa20.32■□□□□ 0.84
ABCA4-204ENST00000470771 CCDC144AA2RUR9 1427 aa20.32■□□□□ 0.84
ABCA4-204ENST00000470771 JCADQ9P266 1359 aa20.32■□□□□ 0.84
ABCA4-204ENST00000470771 DCCP43146 1447 aa20.31■□□□□ 0.84
ABCA4-204ENST00000470771 NRXN3Q9Y4C0 1643 aa20.29■□□□□ 0.84
ABCA4-204ENST00000470771 RGL3Q3MIN7 710 aa20.29■□□□□ 0.84
ABCA4-204ENST00000470771 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.29■□□□□ 0.84
ABCA4-204ENST00000470771 SETD5Q9C0A6 1442 aa20.27■□□□□ 0.84
ABCA4-204ENST00000470771 BRINP3Q76B58 766 aa20.27■□□□□ 0.84
ABCA4-204ENST00000470771 PHLPP1O60346 1717 aa20.26■□□□□ 0.83
ABCA4-204ENST00000470771 SPATA31A6Q5VVP1 1343 aa20.25■□□□□ 0.83
ABCA4-204ENST00000470771 XRN1Q8IZH2 1706 aaKnown RBP20.24■□□□□ 0.83
ABCA4-204ENST00000470771 ANKRD30BQ9BXX2 1392 aa20.24■□□□□ 0.83
ABCA4-204ENST00000470771 MEX3CQ5U5Q3 659 aaKnown RBP20.23■□□□□ 0.83
ABCA4-204ENST00000470771 RGS17Q9UGC6 210 aaPredicted RBP20.23■□□□□ 0.83
ABCA4-204ENST00000470771 ADGRL3Q9HAR2 1447 aa20.22■□□□□ 0.83
ABCA4-204ENST00000470771 LRRC59Q96AG4 307 aaKnown RBP20.21■□□□□ 0.83
ABCA4-204ENST00000470771 PTCH1Q13635 1447 aa20.2■□□□□ 0.82
ABCA4-204ENST00000470771 ADGRF5Q8IZF2 1346 aa20.19■□□□□ 0.82
ABCA4-204ENST00000470771 MST1RQ04912 1400 aa20.19■□□□□ 0.82
ABCA4-204ENST00000470771 SPATA31E1Q6ZUB1 1445 aa20.19■□□□□ 0.82
ABCA4-204ENST00000470771 AHDC1Q5TGY3 1603 aaPredicted RBP20.18■□□□□ 0.82
ABCA4-204ENST00000470771 ROBO2Q9HCK4 1378 aa20.18■□□□□ 0.82
ABCA4-204ENST00000470771 STK26Q9P289 416 aa20.17■□□□□ 0.82
ABCA4-204ENST00000470771 RAB3GAP2Q9H2M9 1393 aa20.17■□□□□ 0.82
ABCA4-204ENST00000470771 COL16A1Q07092 1604 aaPredicted RBP20.16■□□□□ 0.82
ABCA4-204ENST00000470771 PPLO60437 1756 aa20.16■□□□□ 0.82
ABCA4-204ENST00000470771 HRCP23327 699 aa20.15■□□□□ 0.82
ABCA4-204ENST00000470771 ZNF772Q68DY9 489 aaPredicted RBP20.15■□□□□ 0.82
ABCA4-204ENST00000470771 POTEAQ6S8J7 498 aa20.15■□□□□ 0.82
ABCA4-204ENST00000470771 PRAG1Q86YV5 1406 aa20.15■□□□□ 0.82
ABCA4-204ENST00000470771 ASXL1Q8IXJ9 1541 aa20.15■□□□□ 0.82
ABCA4-204ENST00000470771 NUTM2BA6NNL0 878 aaPredicted RBP20.13■□□□□ 0.81
ABCA4-204ENST00000470771 NUTM2EB1AL46 878 aaPredicted RBP20.13■□□□□ 0.81
ABCA4-204ENST00000470771 NUTM2AQ8IVF1 878 aaPredicted RBP20.13■□□□□ 0.81
ABCA4-204ENST00000470771 C1orf167Q5SNV9 1468 aa20.11■□□□□ 0.81
ABCA4-204ENST00000470771 TMEM132EQ6IEE7 984 aa20.11■□□□□ 0.81
ABCA4-204ENST00000470771 LRPPRCP42704 1394 aaKnown RBP20.1■□□□□ 0.81
ABCA4-204ENST00000470771 ABCC11Q96J66 1382 aa20.1■□□□□ 0.81
ABCA4-204ENST00000470771 ESCO1Q5FWF5 840 aa20.09■□□□□ 0.81
ABCA4-204ENST00000470771 ORAI2Q96SN7 254 aa20.09■□□□□ 0.81
ABCA4-204ENST00000470771 C14orf93Q9H972 538 aaKnown RBP20.09■□□□□ 0.81
ABCA4-204ENST00000470771 SETD1AO15047 1707 aaKnown RBP20.08■□□□□ 0.81
ABCA4-204ENST00000470771 NALCNQ8IZF0 1738 aa20.08■□□□□ 0.81
ABCA4-204ENST00000470771 WAPLQ7Z5K2 1190 aa20.08■□□□□ 0.81
ABCA4-204ENST00000470771 DDX17Q92841 729 aaKnown RBP20.08■□□□□ 0.81
ABCA4-204ENST00000470771 SIRT1Q96EB6 747 aa20.08■□□□□ 0.81
ABCA4-204ENST00000470771 PIK3C2GO75747 1445 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms