RNA–Protein interactions for RNA: ENST00000470543.1

HIGD1A-205, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2

Gene HIGD1A, Length 983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-205ENST00000470543 APLP2Q06481 763 aa19.61■□□□□ 0.73
HIGD1A-205ENST00000470543 MYO5BQ9ULV0 1848 aa19.6■□□□□ 0.73
HIGD1A-205ENST00000470543 GCC2Q8IWJ2 1684 aa19.6■□□□□ 0.73
HIGD1A-205ENST00000470543 MEX3CQ5U5Q3 659 aaKnown RBP19.6■□□□□ 0.73
HIGD1A-205ENST00000470543 SLAIN2Q9P270 581 aa19.6■□□□□ 0.73
HIGD1A-205ENST00000470543 NOS1P29475 1434 aa19.59■□□□□ 0.73
HIGD1A-205ENST00000470543 COL16A1Q07092 1604 aaPredicted RBP19.59■□□□□ 0.73
HIGD1A-205ENST00000470543 C14orf37Q86TY3 774 aa19.59■□□□□ 0.73
HIGD1A-205ENST00000470543 CHIC2Q9UKJ5 165 aa19.59■□□□□ 0.73
HIGD1A-205ENST00000470543 CHD2O14647 1828 aaKnown RBP19.59■□□□□ 0.73
HIGD1A-205ENST00000470543 SLC52A1Q9NWF4 448 aa19.58■□□□□ 0.72
HIGD1A-205ENST00000470543 FGD6Q6ZV73 1430 aa19.57■□□□□ 0.72
HIGD1A-205ENST00000470543 PLEKHG1Q9ULL1 1385 aa19.56■□□□□ 0.72
HIGD1A-205ENST00000470543 RPRD2Q5VT52 1461 aaKnown RBP19.54■□□□□ 0.72
HIGD1A-205ENST00000470543 RIMS2Q9UQ26 1411 aa19.54■□□□□ 0.72
HIGD1A-205ENST00000470543 HDGFP51858 240 aaKnown RBP19.54■□□□□ 0.72
HIGD1A-205ENST00000470543 SPATA31A6Q5VVP1 1343 aa19.53■□□□□ 0.72
HIGD1A-205ENST00000470543 ZFYVE9O95405 1425 aa19.52■□□□□ 0.72
HIGD1A-205ENST00000470543 LRP6O75581 1613 aa19.52■□□□□ 0.72
HIGD1A-205ENST00000470543 ZNF772Q68DY9 489 aaPredicted RBP19.52■□□□□ 0.72
HIGD1A-205ENST00000470543 TRIM52Q96A61 297 aa19.52■□□□□ 0.72
HIGD1A-205ENST00000470543 SHPRHQ149N8 1683 aa19.52■□□□□ 0.71
HIGD1A-205ENST00000470543 CHGAP10645 457 aaKnown RBP19.5■□□□□ 0.71
HIGD1A-205ENST00000470543 FOXD1Q16676 465 aa19.5■□□□□ 0.71
HIGD1A-205ENST00000470543 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.5■□□□□ 0.71
HIGD1A-205ENST00000470543 TMEM131LA2VDJ0 1609 aa19.5■□□□□ 0.71
HIGD1A-205ENST00000470543 AHDC1Q5TGY3 1603 aaPredicted RBP19.5■□□□□ 0.71
HIGD1A-205ENST00000470543 LOC105371045A0A1W2PR82 267 aa19.49■□□□□ 0.71
HIGD1A-205ENST00000470543 NCOA3Q9Y6Q9 1424 aa19.49■□□□□ 0.71
HIGD1A-205ENST00000470543 DIP2AQ14689 1571 aa19.49■□□□□ 0.71
HIGD1A-205ENST00000470543 ADGRL2O95490 1459 aa19.48■□□□□ 0.71
HIGD1A-205ENST00000470543 ATF3P18847 181 aa19.48■□□□□ 0.71
HIGD1A-205ENST00000470543 CADPS2Q86UW7 1296 aa19.48■□□□□ 0.71
HIGD1A-205ENST00000470543 ANKRD50Q9ULJ7 1429 aa19.46■□□□□ 0.71
HIGD1A-205ENST00000470543 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.46■□□□□ 0.71
HIGD1A-205ENST00000470543 UPF1Q92900 1129 aaKnown RBP eCLIP19.45■□□□□ 0.77e-16■■■■□ 24.3
HIGD1A-205ENST00000470543 TBX22Q9Y458 520 aa19.44■□□□□ 0.7
HIGD1A-205ENST00000470543 TRPM2O94759 1503 aa19.44■□□□□ 0.7
HIGD1A-205ENST00000470543 NUTM2BA6NNL0 878 aaPredicted RBP19.43■□□□□ 0.7
HIGD1A-205ENST00000470543 NUTM2EB1AL46 878 aaPredicted RBP19.43■□□□□ 0.7
HIGD1A-205ENST00000470543 FAM50AQ14320 339 aaKnown RBP19.43■□□□□ 0.7
HIGD1A-205ENST00000470543 NUTM2AQ8IVF1 878 aaPredicted RBP19.43■□□□□ 0.7
HIGD1A-205ENST00000470543 RXRBP28702 533 aa19.42■□□□□ 0.7
HIGD1A-205ENST00000470543 NUTM2DQ5VT03 806 aaPredicted RBP19.42■□□□□ 0.7
HIGD1A-205ENST00000470543 C19orf44Q9H6X5 657 aa19.42■□□□□ 0.7
HIGD1A-205ENST00000470543 UNC13BO14795 1591 aa19.41■□□□□ 0.7
HIGD1A-205ENST00000470543 PIK3R4Q99570 1358 aa19.41■□□□□ 0.7
HIGD1A-205ENST00000470543 ADAMTS13Q76LX8 1427 aa19.41■□□□□ 0.7
HIGD1A-205ENST00000470543 E9PCH4 1651 aa19.4■□□□□ 0.7
HIGD1A-205ENST00000470543 CDK12Q9NYV4 1490 aaPredicted RBP19.38■□□□□ 0.69
HIGD1A-205ENST00000470543 ASXL1Q8IXJ9 1541 aa19.37■□□□□ 0.69
HIGD1A-205ENST00000470543 DCCP43146 1447 aa19.36■□□□□ 0.69
HIGD1A-205ENST00000470543 AFF2P51816 1311 aa19.36■□□□□ 0.69
HIGD1A-205ENST00000470543 BRINP3Q76B58 766 aa19.36■□□□□ 0.69
HIGD1A-205ENST00000470543 AMOTL2Q9Y2J4 779 aa19.35■□□□□ 0.69
HIGD1A-205ENST00000470543 NHSL1Q5SYE7 1610 aa19.34■□□□□ 0.69
HIGD1A-205ENST00000470543 IQGAP3Q86VI3 1631 aa19.33■□□□□ 0.69
HIGD1A-205ENST00000470543 XRN1Q8IZH2 1706 aaKnown RBP19.32■□□□□ 0.68
HIGD1A-205ENST00000470543 C8orf37Q96NL8 207 aa19.31■□□□□ 0.68
HIGD1A-205ENST00000470543 PTPRUQ92729 1446 aa19.31■□□□□ 0.68
HIGD1A-205ENST00000470543 SETD5Q9C0A6 1442 aa19.3■□□□□ 0.68
HIGD1A-205ENST00000470543 RGS12O14924 1447 aa19.29■□□□□ 0.68
HIGD1A-205ENST00000470543 MST1RQ04912 1400 aa19.29■□□□□ 0.68
HIGD1A-205ENST00000470543 LRRC59Q96AG4 307 aaKnown RBP19.28■□□□□ 0.68
HIGD1A-205ENST00000470543 NRXN3Q9Y4C0 1643 aa19.27■□□□□ 0.68
HIGD1A-205ENST00000470543 SETBP1Q9Y6X0 1596 aa19.27■□□□□ 0.67
HIGD1A-205ENST00000470543 SPHKAPQ2M3C7 1700 aa19.26■□□□□ 0.67
HIGD1A-205ENST00000470543 RBM6P78332 1123 aaKnown RBP19.26■□□□□ 0.67
HIGD1A-205ENST00000470543 ZNF326Q5BKZ1 582 aaKnown RBP19.25■□□□□ 0.67
HIGD1A-205ENST00000470543 NALCNQ8IZF0 1738 aa19.25■□□□□ 0.67
HIGD1A-205ENST00000470543 NUP155O75694 1391 aa19.24■□□□□ 0.67
HIGD1A-205ENST00000470543 PNPLA6Q8IY17 1366 aa19.24■□□□□ 0.67
HIGD1A-205ENST00000470543 QTRT2Q9H974 415 aaKnown RBP19.24■□□□□ 0.67
HIGD1A-205ENST00000470543 ADGRL3Q9HAR2 1447 aa19.24■□□□□ 0.67
HIGD1A-205ENST00000470543 ROCK1Q13464 1354 aa19.21■□□□□ 0.67
HIGD1A-205ENST00000470543 NGLY1Q96IV0 654 aa19.21■□□□□ 0.67
HIGD1A-205ENST00000470543 ATAD2Q6PL18 1390 aa19.2■□□□□ 0.66
HIGD1A-205ENST00000470543 ADAMTS2O95450 1211 aa19.2■□□□□ 0.66
HIGD1A-205ENST00000470543 DDX17Q92841 729 aaKnown RBP19.2■□□□□ 0.66
HIGD1A-205ENST00000470543 METP08581 1390 aa19.19■□□□□ 0.66
HIGD1A-205ENST00000470543 ITGAEP38570 1179 aa19.15■□□□□ 0.66
HIGD1A-205ENST00000470543 KIF1BO60333 1816 aa19.15■□□□□ 0.66
HIGD1A-205ENST00000470543 C1orf167Q5SNV9 1468 aa19.15■□□□□ 0.66
HIGD1A-205ENST00000470543 USP21Q9UK80 565 aa19.14■□□□□ 0.65
HIGD1A-205ENST00000470543 NEXMIFQ5QGS0 1516 aa19.14■□□□□ 0.65
HIGD1A-205ENST00000470543 TRPC5Q9UL62 973 aaPredicted RBP19.13■□□□□ 0.65
HIGD1A-205ENST00000470543 LAMC1P11047 1609 aa19.12■□□□□ 0.65
HIGD1A-205ENST00000470543 CLTCL1P53675 1640 aa19.12■□□□□ 0.65
HIGD1A-205ENST00000470543 PTCH1Q13635 1447 aa19.11■□□□□ 0.65
HIGD1A-205ENST00000470543 ZRANB1Q9UGI0 708 aa19.11■□□□□ 0.65
HIGD1A-205ENST00000470543 COL22A1Q8NFW1 1626 aaPredicted RBP19.07■□□□□ 0.64
HIGD1A-205ENST00000470543 SOS2Q07890 1332 aaPredicted RBP19.07■□□□□ 0.64
HIGD1A-205ENST00000470543 MARF1Q9Y4F3 1742 aaKnown RBP19.06■□□□□ 0.64
HIGD1A-205ENST00000470543 ORAI2Q96SN7 254 aa19.06■□□□□ 0.64
HIGD1A-205ENST00000470543 ATRNO75882 1429 aa19.06■□□□□ 0.64
HIGD1A-205ENST00000470543 ROBO2Q9HCK4 1378 aa19.04■□□□□ 0.64
HIGD1A-205ENST00000470543 FNBP4Q8N3X1 1017 aaPredicted RBP19.02■□□□□ 0.64
HIGD1A-205ENST00000470543 NPHP3Q7Z494 1330 aa19.01■□□□□ 0.63
HIGD1A-205ENST00000470543 HFM1A2PYH4 1435 aa19.01■□□□□ 0.63
HIGD1A-205ENST00000470543 VGFO15240 615 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms