RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 NRXN1Q9ULB1 1477 aa15.26■□□□□ 0.03
SND1-208ENST00000470463 PREX1Q8TCU6 1659 aa15.25■□□□□ 0.03
SND1-208ENST00000470463 EIF3AQ14152 1382 aaKnown RBP15.25■□□□□ 0.03
SND1-208ENST00000470463 IFT172Q9UG01 1749 aa15.25■□□□□ 0.03
SND1-208ENST00000470463 SYNMO15061 1565 aa15.24■□□□□ 0.03
SND1-208ENST00000470463 UGGT1Q9NYU2 1555 aa15.24■□□□□ 0.03
SND1-208ENST00000470463 VGFO15240 615 aaPredicted RBP15.24■□□□□ 0.03
SND1-208ENST00000470463 ERVK-7P63135 1459 aa15.23■□□□□ 0.03
SND1-208ENST00000470463 ZFYVE9O95405 1425 aa15.23■□□□□ 0.03
SND1-208ENST00000470463 SIGLEC1Q9BZZ2 1709 aa15.23■□□□□ 0.03
SND1-208ENST00000470463 DISP3Q9P2K9 1392 aa15.23■□□□□ 0.03
SND1-208ENST00000470463 KIF7Q2M1P5 1343 aa15.22■□□□□ 0.03
SND1-208ENST00000470463 SCAF11Q99590 1463 aaKnown RBP15.22■□□□□ 0.03
SND1-208ENST00000470463 ST20-MTHFSA0A0A6YYL1 179 aa15.22■□□□□ 0.03
SND1-208ENST00000470463 CCER2I3L3R5 266 aa15.22■□□□□ 0.03
SND1-208ENST00000470463 SOCS7O14512 581 aa15.22■□□□□ 0.03
SND1-208ENST00000470463 CENPBP07199 599 aaPredicted RBP15.22■□□□□ 0.03
SND1-208ENST00000470463 CHGAP10645 457 aaKnown RBP15.22■□□□□ 0.03
SND1-208ENST00000470463 SPATA31D1Q6ZQQ2 1576 aa15.22■□□□□ 0.03
SND1-208ENST00000470463 MROH2AA6NES4 1674 aa15.21■□□□□ 0.03
SND1-208ENST00000470463 SETBP1Q9Y6X0 1596 aa15.2■□□□□ 0.02
SND1-208ENST00000470463 CLTCQ00610 1675 aaKnown RBP15.2■□□□□ 0.02
SND1-208ENST00000470463 IDI1Q13907 227 aa15.2■□□□□ 0.02
SND1-208ENST00000470463 NBPF1Q3BBV0 1214 aa15.2■□□□□ 0.02
SND1-208ENST00000470463 CDCA8Q53HL2 280 aa15.2■□□□□ 0.02
SND1-208ENST00000470463 PPLO60437 1756 aa15.2■□□□□ 0.02
SND1-208ENST00000470463 CFAP65Q6ZU64 1925 aaKnown RBP15.19■□□□□ 0.02
SND1-208ENST00000470463 PIK3C2GO75747 1445 aa15.18■□□□□ 0.02
SND1-208ENST00000470463 TMF1P82094 1093 aa15.18■□□□□ 0.02
SND1-208ENST00000470463 ZMYM3Q14202 1370 aa15.18■□□□□ 0.02
SND1-208ENST00000470463 IQGAP1P46940 1657 aa15.17■□□□□ 0.02
SND1-208ENST00000470463 C11orf95C9JLR9 678 aaPredicted RBP15.17■□□□□ 0.02
SND1-208ENST00000470463 CEBPAP49715 358 aaPredicted RBP15.17■□□□□ 0.02
SND1-208ENST00000470463 ADGRF5Q8IZF2 1346 aa15.17■□□□□ 0.02
SND1-208ENST00000470463 HDGFP51858 240 aaKnown RBP15.16■□□□□ 0.02
SND1-208ENST00000470463 C14orf93Q9H972 538 aaKnown RBP15.16■□□□□ 0.02
SND1-208ENST00000470463 STAG3Q9UJ98 1225 aa15.16■□□□□ 0.02
SND1-208ENST00000470463 TMEM131LA2VDJ0 1609 aa15.16■□□□□ 0.02
SND1-208ENST00000470463 NEXMIFQ5QGS0 1516 aa15.16■□□□□ 0.02
SND1-208ENST00000470463 RIMS1Q86UR5 1692 aaKnown RBP15.15■□□□□ 0.02
SND1-208ENST00000470463 ILDR2Q71H61 639 aa15.14■□□□□ 0.01
SND1-208ENST00000470463 FBXO31Q5XUX0 539 aaPredicted RBP15.13■□□□□ 0.01
SND1-208ENST00000470463 TESK2Q96S53 571 aa15.13■□□□□ 0.01
SND1-208ENST00000470463 KDM5AP29375 1690 aaKnown RBP15.12■□□□□ 0.01
SND1-208ENST00000470463 KTN1Q86UP2 1357 aaKnown RBP15.12■□□□□ 0.01
SND1-208ENST00000470463 SBNO2Q9Y2G9 1366 aa15.12■□□□□ 0.01
SND1-208ENST00000470463 CFAP70Q5T0N1 1121 aa15.12■□□□□ 0.01
SND1-208ENST00000470463 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.12■□□□□ 0.01
SND1-208ENST00000470463 TNRQ92752 1358 aa15.11■□□□□ 0.01
SND1-208ENST00000470463 NLRP1Q9C000 1473 aa15.09■□□□□ 0.01
SND1-208ENST00000470463 MYO3AQ8NEV4 1616 aa15.09■□□□□ 0.01
SND1-208ENST00000470463 A2ML1A8K2U0 1454 aa15.08■□□□□ 0.01
SND1-208ENST00000470463 POLR3GLQ9BT43 218 aa15.07■□□□□ 0
SND1-208ENST00000470463 PRKRIP1Q9H875 184 aaPredicted RBP15.07■□□□□ 0
SND1-208ENST00000470463 ADGRB1O14514 1584 aa15.07■□□□□ 0
SND1-208ENST00000470463 PUS7Q96PZ0 661 aaKnown RBP15.06■□□□□ 0
SND1-208ENST00000470463 CENPJQ9HC77 1338 aaPredicted RBP15.05■□□□□ -0
SND1-208ENST00000470463 RIMS2Q9UQ26 1411 aa15.04■□□□□ -0
SND1-208ENST00000470463 RALBP1Q15311 655 aa15.03■□□□□ -0
SND1-208ENST00000470463 MYO5BQ9ULV0 1848 aa15.03■□□□□ -0
SND1-208ENST00000470463 FER1L4A9Z1Z3 1794 aa15.03■□□□□ -0
SND1-208ENST00000470463 YTHDC1Q96MU7 727 aaKnown RBP15□□□□□ -0.01
SND1-208ENST00000470463 ALKQ9UM73 1620 aa14.99□□□□□ -0.01
SND1-208ENST00000470463 TMEM2Q9UHN6 1383 aa14.98□□□□□ -0.01
SND1-208ENST00000470463 C3P01024 1663 aa14.98□□□□□ -0.01
SND1-208ENST00000470463 TRAK1Q9UPV9 953 aa14.98□□□□□ -0.01
SND1-208ENST00000470463 SETD1BQ9UPS6 1966 aaKnown RBP14.97□□□□□ -0.01
SND1-208ENST00000470463 UBR1Q8IWV7 1749 aa14.97□□□□□ -0.01
SND1-208ENST00000470463 DLC1Q96QB1 1528 aa14.97□□□□□ -0.01
SND1-208ENST00000470463 EVC2Q86UK5 1308 aa14.96□□□□□ -0.01
SND1-208ENST00000470463 IQSEC2Q5JU85 1478 aa14.96□□□□□ -0.01
SND1-208ENST00000470463 UBAP1LF5GYI3 381 aa14.96□□□□□ -0.01
SND1-208ENST00000470463 PER1O15534 1290 aaPredicted RBP14.96□□□□□ -0.01
SND1-208ENST00000470463 NUTM2DQ5VT03 806 aaPredicted RBP14.96□□□□□ -0.01
SND1-208ENST00000470463 TMEM132EQ6IEE7 984 aa14.96□□□□□ -0.01
SND1-208ENST00000470463 THEMISQ8N1K5 641 aaPredicted RBP14.96□□□□□ -0.01
SND1-208ENST00000470463 YTHDC2Q9H6S0 1430 aaKnown RBP14.96□□□□□ -0.01
SND1-208ENST00000470463 EID1Q9Y6B2 187 aa14.96□□□□□ -0.01
SND1-208ENST00000470463 QRICH2Q9H0J4 1663 aa14.96□□□□□ -0.01
SND1-208ENST00000470463 NPC1L1Q9UHC9 1359 aa14.96□□□□□ -0.02
SND1-208ENST00000470463 NINLQ9Y2I6 1382 aa14.96□□□□□ -0.02
SND1-208ENST00000470463 ARHGEF28Q8N1W1 1705 aaKnown RBP14.95□□□□□ -0.02
SND1-208ENST00000470463 PANK3Q9H999 370 aa14.95□□□□□ -0.02
SND1-208ENST00000470463 KNSTRNQ9Y448 316 aa14.95□□□□□ -0.02
SND1-208ENST00000470463 MYBBP1AQ9BQG0 1328 aaKnown RBP14.94□□□□□ -0.02
SND1-208ENST00000470463 SIRT1Q96EB6 747 aa14.94□□□□□ -0.02
SND1-208ENST00000470463 LRPPRCP42704 1394 aaKnown RBP14.94□□□□□ -0.02
SND1-208ENST00000470463 ABCC11Q96J66 1382 aa14.94□□□□□ -0.02
SND1-208ENST00000470463 SLIT1O75093 1534 aa14.93□□□□□ -0.02
SND1-208ENST00000470463 MRS2Q9HD23 443 aa14.93□□□□□ -0.02
SND1-208ENST00000470463 PLEKHG1Q9ULL1 1385 aa14.93□□□□□ -0.02
SND1-208ENST00000470463 ASXL1Q8IXJ9 1541 aa14.92□□□□□ -0.02
SND1-208ENST00000470463 BRD4O60885 1362 aaPredicted RBP14.92□□□□□ -0.02
SND1-208ENST00000470463 ARHGAP23Q9P227 1491 aa14.91□□□□□ -0.02
SND1-208ENST00000470463 PARD3Q8TEW0 1356 aa14.91□□□□□ -0.02
SND1-208ENST00000470463 POGKQ9P215 609 aa14.91□□□□□ -0.02
SND1-208ENST00000470463 NLRP13Q86W25 1043 aa14.9□□□□□ -0.02
SND1-208ENST00000470463 NCKAP5LQ9HCH0 1330 aa14.9□□□□□ -0.02
SND1-208ENST00000470463 ATAD2Q6PL18 1390 aa14.89□□□□□ -0.03
SND1-208ENST00000470463 MYOM1P52179 1685 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms