RNA–Protein interactions for RNA: ENST00000469881.1

NUP98-209, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-209ENST00000469881 STAG3Q9UJ98 1225 aa14.98□□□□□ -0.01
NUP98-209ENST00000469881 SETD1AO15047 1707 aaKnown RBP14.97□□□□□ -0.01
NUP98-209ENST00000469881 TMEM131LA2VDJ0 1609 aa14.95□□□□□ -0.02
NUP98-209ENST00000469881 UNC13BO14795 1591 aa14.95□□□□□ -0.02
NUP98-209ENST00000469881 KCNA6P17658 529 aa14.95□□□□□ -0.02
NUP98-209ENST00000469881 IDI1Q13907 227 aa14.95□□□□□ -0.02
NUP98-209ENST00000469881 COL16A1Q07092 1604 aaPredicted RBP14.95□□□□□ -0.02
NUP98-209ENST00000469881 MSH5O43196 834 aa14.94□□□□□ -0.02
NUP98-209ENST00000469881 ZFYVE9O95405 1425 aa14.93□□□□□ -0.02
NUP98-209ENST00000469881 LOC105371045A0A1W2PR82 267 aa14.93□□□□□ -0.02
NUP98-209ENST00000469881 NCBP3Q53F19 620 aaKnown RBP14.93□□□□□ -0.02
NUP98-209ENST00000469881 DIP2AQ14689 1571 aa14.93□□□□□ -0.02
NUP98-209ENST00000469881 SLC26A8Q96RN1 970 aa14.92□□□□□ -0.02
NUP98-209ENST00000469881 MSH6P52701 1360 aa14.92□□□□□ -0.02
NUP98-209ENST00000469881 E9PCH4 1651 aa14.92□□□□□ -0.02
NUP98-209ENST00000469881 PROSER2Q86WR7 435 aaPredicted RBP14.91□□□□□ -0.02
NUP98-209ENST00000469881 SHPRHQ149N8 1683 aa14.9□□□□□ -0.02
NUP98-209ENST00000469881 PLEKHG1Q9ULL1 1385 aa14.9□□□□□ -0.02
NUP98-209ENST00000469881 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.9□□□□□ -0.02
NUP98-209ENST00000469881 APLP2Q06481 763 aa14.9□□□□□ -0.02
NUP98-209ENST00000469881 SLC52A1Q9NWF4 448 aa14.9□□□□□ -0.02
NUP98-209ENST00000469881 CHIC2Q9UKJ5 165 aa14.89□□□□□ -0.03
NUP98-209ENST00000469881 ANKRD50Q9ULJ7 1429 aa14.89□□□□□ -0.03
NUP98-209ENST00000469881 IQGAP3Q86VI3 1631 aa14.88□□□□□ -0.03
NUP98-209ENST00000469881 POTEAQ6S8J7 498 aa14.88□□□□□ -0.03
NUP98-209ENST00000469881 RIMS2Q9UQ26 1411 aa14.88□□□□□ -0.03
NUP98-209ENST00000469881 AHDC1Q5TGY3 1603 aaPredicted RBP14.88□□□□□ -0.03
NUP98-209ENST00000469881 RBM33Q96EV2 1170 aaKnown RBP14.87□□□□□ -0.03
NUP98-209ENST00000469881 JCADQ9P266 1359 aa14.86□□□□□ -0.03
NUP98-209ENST00000469881 NCOA3Q9Y6Q9 1424 aa14.86□□□□□ -0.03
NUP98-209ENST00000469881 TRPM2O94759 1503 aa14.84□□□□□ -0.03
NUP98-209ENST00000469881 BCANQ96GW7 911 aa14.84□□□□□ -0.03
NUP98-209ENST00000469881 LRP6O75581 1613 aa14.84□□□□□ -0.03
NUP98-209ENST00000469881 SLAIN2Q9P270 581 aa14.83□□□□□ -0.04
NUP98-209ENST00000469881 XRN1Q8IZH2 1706 aaKnown RBP14.83□□□□□ -0.04
NUP98-209ENST00000469881 ADAMTS13Q76LX8 1427 aa14.83□□□□□ -0.04
NUP98-209ENST00000469881 PPP1R15AO75807 674 aaPredicted RBP14.82□□□□□ -0.04
NUP98-209ENST00000469881 SPHKAPQ2M3C7 1700 aa14.82□□□□□ -0.04
NUP98-209ENST00000469881 NHSL1Q5SYE7 1610 aa14.81□□□□□ -0.04
NUP98-209ENST00000469881 NRXN3Q9Y4C0 1643 aa14.81□□□□□ -0.04
NUP98-209ENST00000469881 HDGFP51858 240 aaKnown RBP14.8□□□□□ -0.04
NUP98-209ENST00000469881 PIK3R4Q99570 1358 aa14.8□□□□□ -0.04
NUP98-209ENST00000469881 SPATA31A6Q5VVP1 1343 aa14.79□□□□□ -0.04
NUP98-209ENST00000469881 TBX22Q9Y458 520 aa14.79□□□□□ -0.04
NUP98-209ENST00000469881 FAM50AQ14320 339 aaKnown RBP14.78□□□□□ -0.04
NUP98-209ENST00000469881 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.78□□□□□ -0.04
NUP98-209ENST00000469881 SETBP1Q9Y6X0 1596 aa14.77□□□□□ -0.04
NUP98-209ENST00000469881 DCCP43146 1447 aa14.77□□□□□ -0.04
NUP98-209ENST00000469881 NALCNQ8IZF0 1738 aa14.76□□□□□ -0.05
NUP98-209ENST00000469881 ASXL1Q8IXJ9 1541 aa14.76□□□□□ -0.05
NUP98-209ENST00000469881 ROCK1Q13464 1354 aa14.75□□□□□ -0.05
NUP98-209ENST00000469881 C14orf37Q86TY3 774 aa14.75□□□□□ -0.05
NUP98-209ENST00000469881 CADPS2Q86UW7 1296 aa14.75□□□□□ -0.05
NUP98-209ENST00000469881 PTPRUQ92729 1446 aa14.74□□□□□ -0.05
NUP98-209ENST00000469881 CHGAP10645 457 aaKnown RBP14.73□□□□□ -0.05
NUP98-209ENST00000469881 C19orf44Q9H6X5 657 aa14.73□□□□□ -0.05
NUP98-209ENST00000469881 CDK12Q9NYV4 1490 aaPredicted RBP14.72□□□□□ -0.05
NUP98-209ENST00000469881 ATF3P18847 181 aa14.72□□□□□ -0.05
NUP98-209ENST00000469881 MEX3CQ5U5Q3 659 aaKnown RBP14.72□□□□□ -0.05
NUP98-209ENST00000469881 ZNF772Q68DY9 489 aaPredicted RBP14.72□□□□□ -0.05
NUP98-209ENST00000469881 KIF1BO60333 1816 aa14.71□□□□□ -0.05
NUP98-209ENST00000469881 MST1RQ04912 1400 aa14.7□□□□□ -0.06
NUP98-209ENST00000469881 NUTM2DQ5VT03 806 aaPredicted RBP14.7□□□□□ -0.06
NUP98-209ENST00000469881 LAMC1P11047 1609 aa14.7□□□□□ -0.06
NUP98-209ENST00000469881 CLTCL1P53675 1640 aa14.7□□□□□ -0.06
NUP98-209ENST00000469881 SETD5Q9C0A6 1442 aa14.69□□□□□ -0.06
NUP98-209ENST00000469881 NEXMIFQ5QGS0 1516 aa14.68□□□□□ -0.06
NUP98-209ENST00000469881 BRINP3Q76B58 766 aa14.68□□□□□ -0.06
NUP98-209ENST00000469881 ADGRL3Q9HAR2 1447 aa14.67□□□□□ -0.06
NUP98-209ENST00000469881 AMOTL2Q9Y2J4 779 aa14.67□□□□□ -0.06
NUP98-209ENST00000469881 NUP155O75694 1391 aa14.67□□□□□ -0.06
NUP98-209ENST00000469881 CNKSR2Q8WXI2 1034 aa14.66□□□□□ -0.06
NUP98-209ENST00000469881 UPF1Q92900 1129 aaKnown RBP eCLIP14.66□□□□□ -0.063e-6■□□□□ 8.7
NUP98-209ENST00000469881 TRIM52Q96A61 297 aa14.66□□□□□ -0.06
NUP98-209ENST00000469881 NPM3O75607 178 aaKnown RBP14.65□□□□□ -0.06
NUP98-209ENST00000469881 SLC4A1APQ9BWU0 796 aaKnown RBP14.65□□□□□ -0.06
NUP98-209ENST00000469881 RXRBP28702 533 aa14.63□□□□□ -0.07
NUP98-209ENST00000469881 METP08581 1390 aa14.62□□□□□ -0.07
NUP98-209ENST00000469881 RGS12O14924 1447 aa14.62□□□□□ -0.07
NUP98-209ENST00000469881 AFF2P51816 1311 aa14.62□□□□□ -0.07
NUP98-209ENST00000469881 PNPLA6Q8IY17 1366 aa14.61□□□□□ -0.07
NUP98-209ENST00000469881 MARF1Q9Y4F3 1742 aaKnown RBP14.61□□□□□ -0.07
NUP98-209ENST00000469881 PPLO60437 1756 aa14.61□□□□□ -0.07
NUP98-209ENST00000469881 NUTM2BA6NNL0 878 aaPredicted RBP14.61□□□□□ -0.07
NUP98-209ENST00000469881 NUTM2EB1AL46 878 aaPredicted RBP14.61□□□□□ -0.07
NUP98-209ENST00000469881 NUTM2AQ8IVF1 878 aaPredicted RBP14.61□□□□□ -0.07
NUP98-209ENST00000469881 COL22A1Q8NFW1 1626 aaPredicted RBP14.61□□□□□ -0.07
NUP98-209ENST00000469881 PTCH1Q13635 1447 aa14.6□□□□□ -0.07
NUP98-209ENST00000469881 LRRC59Q96AG4 307 aaKnown RBP14.59□□□□□ -0.07
NUP98-209ENST00000469881 PRAG1Q86YV5 1406 aa14.58□□□□□ -0.07
NUP98-209ENST00000469881 ZNF326Q5BKZ1 582 aaKnown RBP14.58□□□□□ -0.08
NUP98-209ENST00000469881 C1orf167Q5SNV9 1468 aa14.57□□□□□ -0.08
NUP98-209ENST00000469881 CDC42BPGQ6DT37 1551 aa14.56□□□□□ -0.08
NUP98-209ENST00000469881 ITGAEP38570 1179 aa14.55□□□□□ -0.08
NUP98-209ENST00000469881 C8orf37Q96NL8 207 aa14.55□□□□□ -0.08
NUP98-209ENST00000469881 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.53□□□□□ -0.08
NUP98-209ENST00000469881 RBM6P78332 1123 aaKnown RBP14.53□□□□□ -0.08
NUP98-209ENST00000469881 DDX17Q92841 729 aaKnown RBP14.53□□□□□ -0.08
NUP98-209ENST00000469881 IFT172Q9UG01 1749 aa14.52□□□□□ -0.08
NUP98-209ENST00000469881 KNDC1Q76NI1 1749 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms