RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 NWD1Q149M9 1564 aa20.1■□□□□ 0.81
TRAPPC12-216ENST00000469400 ADGRB3O60242 1522 aa20.1■□□□□ 0.81
TRAPPC12-216ENST00000469400 APLP2Q06481 763 aa20.09■□□□□ 0.81
TRAPPC12-216ENST00000469400 JCADQ9P266 1359 aa20.07■□□□□ 0.8
TRAPPC12-216ENST00000469400 PLEKHG1Q9ULL1 1385 aa20.05■□□□□ 0.8
TRAPPC12-216ENST00000469400 ZFYVE9O95405 1425 aa20.04■□□□□ 0.8
TRAPPC12-216ENST00000469400 PPP1R15AO75807 674 aaPredicted RBP20.04■□□□□ 0.8
TRAPPC12-216ENST00000469400 HDGFP51858 240 aaKnown RBP20.03■□□□□ 0.8
TRAPPC12-216ENST00000469400 PHLPP1O60346 1717 aa20.02■□□□□ 0.8
TRAPPC12-216ENST00000469400 RPRD2Q5VT52 1461 aaKnown RBP20.02■□□□□ 0.8
TRAPPC12-216ENST00000469400 RIMS2Q9UQ26 1411 aa20.02■□□□□ 0.79
TRAPPC12-216ENST00000469400 TBX22Q9Y458 520 aa20.01■□□□□ 0.79
TRAPPC12-216ENST00000469400 ADGRL2O95490 1459 aa20■□□□□ 0.79
TRAPPC12-216ENST00000469400 ANKRD50Q9ULJ7 1429 aa19.99■□□□□ 0.79
TRAPPC12-216ENST00000469400 NCOA3Q9Y6Q9 1424 aa19.99■□□□□ 0.79
TRAPPC12-216ENST00000469400 CHD2O14647 1828 aaKnown RBP19.98■□□□□ 0.79
TRAPPC12-216ENST00000469400 C14orf37Q86TY3 774 aa19.98■□□□□ 0.79
TRAPPC12-216ENST00000469400 SETD1AO15047 1707 aaKnown RBP19.98■□□□□ 0.79
TRAPPC12-216ENST00000469400 COL16A1Q07092 1604 aaPredicted RBP19.97■□□□□ 0.79
TRAPPC12-216ENST00000469400 SPATA31A6Q5VVP1 1343 aa19.97■□□□□ 0.79
TRAPPC12-216ENST00000469400 FAM50AQ14320 339 aaKnown RBP19.96■□□□□ 0.79
TRAPPC12-216ENST00000469400 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.96■□□□□ 0.79
TRAPPC12-216ENST00000469400 TMEM131LA2VDJ0 1609 aa19.95■□□□□ 0.78
TRAPPC12-216ENST00000469400 LRP6O75581 1613 aa19.95■□□□□ 0.78
TRAPPC12-216ENST00000469400 CHGAP10645 457 aaKnown RBP19.95■□□□□ 0.78
TRAPPC12-216ENST00000469400 MEX3CQ5U5Q3 659 aaKnown RBP19.95■□□□□ 0.78
TRAPPC12-216ENST00000469400 NUTM2DQ5VT03 806 aaPredicted RBP19.95■□□□□ 0.78
TRAPPC12-216ENST00000469400 CADPS2Q86UW7 1296 aa19.95■□□□□ 0.78
TRAPPC12-216ENST00000469400 C19orf44Q9H6X5 657 aa19.95■□□□□ 0.78
TRAPPC12-216ENST00000469400 ZNF772Q68DY9 489 aaPredicted RBP19.94■□□□□ 0.78
TRAPPC12-216ENST00000469400 MYO5BQ9ULV0 1848 aa19.94■□□□□ 0.78
TRAPPC12-216ENST00000469400 ADAMTS13Q76LX8 1427 aa19.93■□□□□ 0.78
TRAPPC12-216ENST00000469400 ATF3P18847 181 aa19.93■□□□□ 0.78
TRAPPC12-216ENST00000469400 GCC2Q8IWJ2 1684 aa19.93■□□□□ 0.78
TRAPPC12-216ENST00000469400 UPF1Q92900 1129 aaKnown RBP eCLIP19.91■□□□□ 0.78
TRAPPC12-216ENST00000469400 TRIM52Q96A61 297 aa19.91■□□□□ 0.78
TRAPPC12-216ENST00000469400 PIK3R4Q99570 1358 aa19.91■□□□□ 0.78
TRAPPC12-216ENST00000469400 AHDC1Q5TGY3 1603 aaPredicted RBP19.89■□□□□ 0.77
TRAPPC12-216ENST00000469400 BRINP3Q76B58 766 aa19.88■□□□□ 0.77
TRAPPC12-216ENST00000469400 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.88■□□□□ 0.77
TRAPPC12-216ENST00000469400 AMOTL2Q9Y2J4 779 aa19.87■□□□□ 0.77
TRAPPC12-216ENST00000469400 DIP2AQ14689 1571 aa19.87■□□□□ 0.77
TRAPPC12-216ENST00000469400 RXRBP28702 533 aa19.86■□□□□ 0.77
TRAPPC12-216ENST00000469400 NUTM2BA6NNL0 878 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC12-216ENST00000469400 NUTM2EB1AL46 878 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC12-216ENST00000469400 NUTM2AQ8IVF1 878 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC12-216ENST00000469400 PTPRUQ92729 1446 aa19.85■□□□□ 0.77
TRAPPC12-216ENST00000469400 SHPRHQ149N8 1683 aa19.84■□□□□ 0.77
TRAPPC12-216ENST00000469400 UNC13BO14795 1591 aa19.83■□□□□ 0.77
TRAPPC12-216ENST00000469400 TRPM2O94759 1503 aa19.82■□□□□ 0.76
TRAPPC12-216ENST00000469400 E9PCH4 1651 aa19.82■□□□□ 0.76
TRAPPC12-216ENST00000469400 DCCP43146 1447 aa19.79■□□□□ 0.76
TRAPPC12-216ENST00000469400 AFF2P51816 1311 aa19.78■□□□□ 0.76
TRAPPC12-216ENST00000469400 NUP155O75694 1391 aa19.78■□□□□ 0.76
TRAPPC12-216ENST00000469400 ROCK1Q13464 1354 aa19.78■□□□□ 0.76
TRAPPC12-216ENST00000469400 CDK12Q9NYV4 1490 aaPredicted RBP19.78■□□□□ 0.76
TRAPPC12-216ENST00000469400 SETD5Q9C0A6 1442 aa19.77■□□□□ 0.76
TRAPPC12-216ENST00000469400 ASXL1Q8IXJ9 1541 aa19.77■□□□□ 0.76
TRAPPC12-216ENST00000469400 IQGAP3Q86VI3 1631 aa19.76■□□□□ 0.75
TRAPPC12-216ENST00000469400 LRRC59Q96AG4 307 aaKnown RBP19.76■□□□□ 0.75
TRAPPC12-216ENST00000469400 MST1RQ04912 1400 aa19.76■□□□□ 0.75
TRAPPC12-216ENST00000469400 METP08581 1390 aa19.73■□□□□ 0.75
TRAPPC12-216ENST00000469400 DDX17Q92841 729 aaKnown RBP19.73■□□□□ 0.75
TRAPPC12-216ENST00000469400 NRXN3Q9Y4C0 1643 aa19.73■□□□□ 0.75
TRAPPC12-216ENST00000469400 ZNF326Q5BKZ1 582 aaKnown RBP19.72■□□□□ 0.75
TRAPPC12-216ENST00000469400 XRN1Q8IZH2 1706 aaKnown RBP19.72■□□□□ 0.75
TRAPPC12-216ENST00000469400 C8orf37Q96NL8 207 aa19.72■□□□□ 0.75
TRAPPC12-216ENST00000469400 QTRT2Q9H974 415 aaKnown RBP19.72■□□□□ 0.75
TRAPPC12-216ENST00000469400 SETBP1Q9Y6X0 1596 aa19.72■□□□□ 0.75
TRAPPC12-216ENST00000469400 RBM6P78332 1123 aaKnown RBP19.7■□□□□ 0.74
TRAPPC12-216ENST00000469400 PNPLA6Q8IY17 1366 aa19.7■□□□□ 0.74
TRAPPC12-216ENST00000469400 NHSL1Q5SYE7 1610 aa19.69■□□□□ 0.74
TRAPPC12-216ENST00000469400 RGS12O14924 1447 aa19.68■□□□□ 0.74
TRAPPC12-216ENST00000469400 ADGRL3Q9HAR2 1447 aa19.68■□□□□ 0.74
TRAPPC12-216ENST00000469400 ITGAEP38570 1179 aa19.67■□□□□ 0.74
TRAPPC12-216ENST00000469400 ADAMTS2O95450 1211 aa19.65■□□□□ 0.74
TRAPPC12-216ENST00000469400 NGLY1Q96IV0 654 aa19.65■□□□□ 0.74
TRAPPC12-216ENST00000469400 C1orf167Q5SNV9 1468 aa19.62■□□□□ 0.73
TRAPPC12-216ENST00000469400 SPHKAPQ2M3C7 1700 aa19.61■□□□□ 0.73
TRAPPC12-216ENST00000469400 NEXMIFQ5QGS0 1516 aa19.6■□□□□ 0.73
TRAPPC12-216ENST00000469400 NALCNQ8IZF0 1738 aa19.59■□□□□ 0.73
TRAPPC12-216ENST00000469400 SOS2Q07890 1332 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC12-216ENST00000469400 ORAI2Q96SN7 254 aa19.59■□□□□ 0.73
TRAPPC12-216ENST00000469400 SRCAPQ6ZRS2 3230 aa19.58■□□□□ 0.73
TRAPPC12-216ENST00000469400 USP21Q9UK80 565 aa19.58■□□□□ 0.72
TRAPPC12-216ENST00000469400 ATAD2Q6PL18 1390 aa19.57■□□□□ 0.72
TRAPPC12-216ENST00000469400 ROBO2Q9HCK4 1378 aa19.57■□□□□ 0.72
TRAPPC12-216ENST00000469400 CLTCL1P53675 1640 aa19.56■□□□□ 0.72
TRAPPC12-216ENST00000469400 TRPC5Q9UL62 973 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC12-216ENST00000469400 PTCH1Q13635 1447 aa19.56■□□□□ 0.72
TRAPPC12-216ENST00000469400 FNBP4Q8N3X1 1017 aaPredicted RBP19.55■□□□□ 0.72
TRAPPC12-216ENST00000469400 LAMC1P11047 1609 aa19.54■□□□□ 0.72
TRAPPC12-216ENST00000469400 VGFO15240 615 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC12-216ENST00000469400 PPARGC1BQ86YN6 1023 aaKnown RBP19.51■□□□□ 0.71
TRAPPC12-216ENST00000469400 ATRNO75882 1429 aa19.51■□□□□ 0.71
TRAPPC12-216ENST00000469400 PRAG1Q86YV5 1406 aa19.49■□□□□ 0.71
TRAPPC12-216ENST00000469400 ZRANB1Q9UGI0 708 aa19.48■□□□□ 0.71
TRAPPC12-216ENST00000469400 HFM1A2PYH4 1435 aa19.48■□□□□ 0.71
TRAPPC12-216ENST00000469400 ESCO1Q5FWF5 840 aa19.47■□□□□ 0.71
TRAPPC12-216ENST00000469400 RPGRIP1LQ68CZ1 1315 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms