RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 ZKSCAN2Q63HK3 967 aa18.84■□□□□ 0.61
LIMS2-213ENST00000469300 RUNDC1Q96C34 613 aa18.84■□□□□ 0.61
LIMS2-213ENST00000469300 APAF1O14727 1248 aa18.83■□□□□ 0.61
LIMS2-213ENST00000469300 MAP3K1Q13233 1512 aa18.83■□□□□ 0.61
LIMS2-213ENST00000469300 RAPGEF4Q8WZA2 1011 aa18.82■□□□□ 0.6
LIMS2-213ENST00000469300 NEXNQ0ZGT2 675 aa18.81■□□□□ 0.6
LIMS2-213ENST00000469300 CDK13Q14004 1512 aaKnown RBP18.81■□□□□ 0.6
LIMS2-213ENST00000469300 PROSER2Q86WR7 435 aaPredicted RBP18.8■□□□□ 0.6
LIMS2-213ENST00000469300 CNTLNQ9NXG0 1405 aa18.8■□□□□ 0.6
LIMS2-213ENST00000469300 CABP2Q9NPB3 220 aa18.8■□□□□ 0.6
LIMS2-213ENST00000469300 PTMAP06454 111 aaKnown RBP18.8■□□□□ 0.6
LIMS2-213ENST00000469300 ANKLE2Q86XL3 938 aa18.8■□□□□ 0.6
LIMS2-213ENST00000469300 API5Q9BZZ5 524 aaKnown RBP18.8■□□□□ 0.6
LIMS2-213ENST00000469300 RIPK4P57078 832 aa18.79■□□□□ 0.6
LIMS2-213ENST00000469300 NLRP6P59044 892 aa18.79■□□□□ 0.6
LIMS2-213ENST00000469300 ZNF692Q9BU19 519 aaPredicted RBP18.79■□□□□ 0.6
LIMS2-213ENST00000469300 GNAI1P63096 354 aa18.79■□□□□ 0.6
LIMS2-213ENST00000469300 DDX58O95786 925 aaKnown RBP18.78■□□□□ 0.6
LIMS2-213ENST00000469300 PLB1Q6P1J6 1458 aa18.78■□□□□ 0.6
LIMS2-213ENST00000469300 GGNBP2Q9H3C7 697 aa18.77■□□□□ 0.59
LIMS2-213ENST00000469300 BRD4O60885 1362 aaPredicted RBP18.76■□□□□ 0.59
LIMS2-213ENST00000469300 ARHGEF11O15085 1522 aa18.76■□□□□ 0.59
LIMS2-213ENST00000469300 BIVM-ERCC5R4GMW8 1640 aa18.76■□□□□ 0.59
LIMS2-213ENST00000469300 PRAM1Q96QH2 718 aa18.76■□□□□ 0.59
LIMS2-213ENST00000469300 ELL2O00472 640 aaPredicted RBP18.76■□□□□ 0.59
LIMS2-213ENST00000469300 TRIM6-TRIM34B2RNG4 842 aa18.75■□□□□ 0.59
LIMS2-213ENST00000469300 NRDCO43847 1150 aa18.75■□□□□ 0.59
LIMS2-213ENST00000469300 GOLGA6L6A8MZA4 724 aa18.75■□□□□ 0.59
LIMS2-213ENST00000469300 PTMSP20962 102 aa18.74■□□□□ 0.59
LIMS2-213ENST00000469300 KIF14Q15058 1648 aa18.74■□□□□ 0.59
LIMS2-213ENST00000469300 ZNF608Q9ULD9 1512 aaPredicted RBP18.74■□□□□ 0.59
LIMS2-213ENST00000469300 UNC13AQ9UPW8 1703 aa18.74■□□□□ 0.59
LIMS2-213ENST00000469300 DNTTIP2Q5QJE6 756 aaKnown RBP18.74■□□□□ 0.59
LIMS2-213ENST00000469300 G3V3G9 751 aa18.74■□□□□ 0.59
LIMS2-213ENST00000469300 DCAF8Q5TAQ9 597 aa18.74■□□□□ 0.59
LIMS2-213ENST00000469300 PPP6R1Q9UPN7 881 aa18.74■□□□□ 0.59
LIMS2-213ENST00000469300 HTATSF1O43719 755 aaKnown RBP18.73■□□□□ 0.59
LIMS2-213ENST00000469300 CENPQQ7L2Z9 268 aaPredicted RBP18.73■□□□□ 0.59
LIMS2-213ENST00000469300 DDX19BQ9UMR2 479 aa18.73■□□□□ 0.59
LIMS2-213ENST00000469300 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.72■□□□□ 0.59
LIMS2-213ENST00000469300 ISY1Q9ULR0 285 aaKnown RBP18.72■□□□□ 0.59
LIMS2-213ENST00000469300 NAIPQ13075 1403 aa18.72■□□□□ 0.59
LIMS2-213ENST00000469300 GNL2Q13823 731 aaKnown RBP18.72■□□□□ 0.59
LIMS2-213ENST00000469300 TAOK2Q9UL54 1235 aa18.72■□□□□ 0.59
LIMS2-213ENST00000469300 PCF11O94913 1555 aaKnown RBP18.72■□□□□ 0.59
LIMS2-213ENST00000469300 ADGRL1O94910 1474 aa18.72■□□□□ 0.59
LIMS2-213ENST00000469300 KIF16BQ96L93 1317 aa18.72■□□□□ 0.59
LIMS2-213ENST00000469300 ERBINQ96RT1 1412 aa18.71■□□□□ 0.59
LIMS2-213ENST00000469300 AAMPQ13685 434 aa18.71■□□□□ 0.59
LIMS2-213ENST00000469300 LRRFIP1Q32MZ4 808 aaKnown RBP18.71■□□□□ 0.59
LIMS2-213ENST00000469300 MEX3CQ5U5Q3 659 aaKnown RBP18.71■□□□□ 0.59
LIMS2-213ENST00000469300 NLRP2Q9NX02 1062 aa18.71■□□□□ 0.59
LIMS2-213ENST00000469300 RRP1P56182 461 aaKnown RBP18.71■□□□□ 0.59
LIMS2-213ENST00000469300 ABTB2Q8N961 1025 aa18.7■□□□□ 0.58
LIMS2-213ENST00000469300 NBPF1Q3BBV0 1214 aa18.7■□□□□ 0.58
LIMS2-213ENST00000469300 ESCO1Q5FWF5 840 aa18.7■□□□□ 0.58
LIMS2-213ENST00000469300 L1TD1Q5T7N2 865 aaKnown RBP18.7■□□□□ 0.58
LIMS2-213ENST00000469300 CAMSAP2Q08AD1 1489 aa18.7■□□□□ 0.58
LIMS2-213ENST00000469300 ATAD2Q6PL18 1390 aa18.7■□□□□ 0.58
LIMS2-213ENST00000469300 GAS2L2Q8NHY3 880 aa18.69■□□□□ 0.58
LIMS2-213ENST00000469300 C9orf78Q9NZ63 289 aaPredicted RBP18.69■□□□□ 0.58
LIMS2-213ENST00000469300 FRAT2O75474 233 aaPredicted RBP18.69■□□□□ 0.58
LIMS2-213ENST00000469300 MTHFSP49914 203 aa18.69■□□□□ 0.58
LIMS2-213ENST00000469300 TPRNQ4KMQ1 711 aa18.69■□□□□ 0.58
LIMS2-213ENST00000469300 GBP4Q96PP9 640 aa18.69■□□□□ 0.58
LIMS2-213ENST00000469300 CHMP4CQ96CF2 233 aa18.68■□□□□ 0.58
LIMS2-213ENST00000469300 EIF2S2P20042 333 aaKnown RBP18.68■□□□□ 0.58
LIMS2-213ENST00000469300 TSPYL4Q9UJ04 414 aa18.68■□□□□ 0.58
LIMS2-213ENST00000469300 BCL2L13Q9BXK5 485 aa18.67■□□□□ 0.58
LIMS2-213ENST00000469300 DZIP1LQ8IYY4 767 aaKnown RBP18.67■□□□□ 0.58
LIMS2-213ENST00000469300 CDK19Q9BWU1 502 aa18.66■□□□□ 0.58
LIMS2-213ENST00000469300 RTEL1-TNFRSF6BF6WH68 1400 aa18.66■□□□□ 0.58
LIMS2-213ENST00000469300 KIF3AQ9Y496 699 aa18.65■□□□□ 0.58
LIMS2-213ENST00000469300 ABCC5O15440 1437 aa18.65■□□□□ 0.58
LIMS2-213ENST00000469300 DENND4BO75064 1496 aaPredicted RBP18.65■□□□□ 0.58
LIMS2-213ENST00000469300 MFAP1P55081 439 aaKnown RBP18.65■□□□□ 0.58
LIMS2-213ENST00000469300 PLEKHO1Q53GL0 409 aaPredicted RBP18.65■□□□□ 0.58
LIMS2-213ENST00000469300 AKNAQ7Z591 1439 aa18.65■□□□□ 0.58
LIMS2-213ENST00000469300 HMOX1P09601 288 aa18.64■□□□□ 0.57
LIMS2-213ENST00000469300 NBPF8Q3BBV2 869 aa18.64■□□□□ 0.57
LIMS2-213ENST00000469300 FKBP5Q13451 457 aaPredicted RBP18.64■□□□□ 0.57
LIMS2-213ENST00000469300 CCDC34Q96HJ3 373 aa18.63■□□□□ 0.57
LIMS2-213ENST00000469300 SMG6Q86US8 1419 aaKnown RBP18.63■□□□□ 0.57
LIMS2-213ENST00000469300 HSP90AB4PQ58FF6 505 aa18.63■□□□□ 0.57
LIMS2-213ENST00000469300 PPP2R1AP30153 589 aa18.63■□□□□ 0.57
LIMS2-213ENST00000469300 SYTL4Q96C24 671 aaPredicted RBP18.63■□□□□ 0.57
LIMS2-213ENST00000469300 PLCB2Q00722 1185 aa18.62■□□□□ 0.57
LIMS2-213ENST00000469300 COG6Q9Y2V7 657 aa18.62■□□□□ 0.57
LIMS2-213ENST00000469300 ANKRD45Q5TZF3 282 aa18.62■□□□□ 0.57
LIMS2-213ENST00000469300 PLIN1O60240 522 aa18.61■□□□□ 0.57
LIMS2-213ENST00000469300 ST18O60284 1047 aa18.61■□□□□ 0.57
LIMS2-213ENST00000469300 SLC12A5Q9H2X9 1139 aa18.61■□□□□ 0.57
LIMS2-213ENST00000469300 PTPN23Q9H3S7 1636 aa18.61■□□□□ 0.57
LIMS2-213ENST00000469300 SLC26A8Q96RN1 970 aa18.61■□□□□ 0.57
LIMS2-213ENST00000469300 CABP1Q9NZU7 370 aa18.61■□□□□ 0.57
LIMS2-213ENST00000469300 NUTM2GQ5VZR2 741 aa18.6■□□□□ 0.57
LIMS2-213ENST00000469300 SPRYD3Q8NCJ5 442 aa18.6■□□□□ 0.57
LIMS2-213ENST00000469300 NCOA1Q15788 1441 aa18.6■□□□□ 0.57
LIMS2-213ENST00000469300 RUFY2Q8WXA3 655 aa18.6■□□□□ 0.57
LIMS2-213ENST00000469300 FANCAO15360 1455 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 332.3 ms