RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 APAF1O14727 1248 aa16.06■□□□□ 0.16
USP11-206ENST00000469080 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.05■□□□□ 0.16
USP11-206ENST00000469080 ADCY10Q96PN6 1610 aa16.05■□□□□ 0.16
USP11-206ENST00000469080 USP35Q9P2H5 1018 aa16.04■□□□□ 0.16
USP11-206ENST00000469080 FANCAO15360 1455 aa16.04■□□□□ 0.16
USP11-206ENST00000469080 FAM135AQ9P2D6 1515 aa16.04■□□□□ 0.16
USP11-206ENST00000469080 GCC2Q8IWJ2 1684 aa16.04■□□□□ 0.16
USP11-206ENST00000469080 ZCCHC11Q5TAX3 1644 aaKnown RBP16.04■□□□□ 0.16
USP11-206ENST00000469080 HSP90AA1P07900 732 aaKnown RBP16.04■□□□□ 0.16
USP11-206ENST00000469080 KDM5BQ9UGL1 1544 aa16.04■□□□□ 0.16
USP11-206ENST00000469080 TTC37Q6PGP7 1564 aa16.04■□□□□ 0.16
USP11-206ENST00000469080 ITSN2Q9NZM3 1697 aa16.03■□□□□ 0.16
USP11-206ENST00000469080 RGS3P49796 1198 aa16.03■□□□□ 0.16
USP11-206ENST00000469080 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.03■□□□□ 0.16
USP11-206ENST00000469080 ADGRL1O94910 1474 aa16.03■□□□□ 0.16
USP11-206ENST00000469080 FAM43AQ8N2R8 423 aa16.03■□□□□ 0.16
USP11-206ENST00000469080 FBLN1P23142 703 aa16.02■□□□□ 0.16
USP11-206ENST00000469080 ARHGEF12Q9NZN5 1544 aa16.02■□□□□ 0.16
USP11-206ENST00000469080 PLCH2O75038 1416 aa16.02■□□□□ 0.16
USP11-206ENST00000469080 CDCA8Q53HL2 280 aa16.01■□□□□ 0.15
USP11-206ENST00000469080 TESK2Q96S53 571 aa16■□□□□ 0.15
USP11-206ENST00000469080 CDC42BPAQ5VT25 1732 aa16■□□□□ 0.15
USP11-206ENST00000469080 SAMD9LQ8IVG5 1584 aa16■□□□□ 0.15
USP11-206ENST00000469080 ZBTB7CA1YPR0 619 aa16■□□□□ 0.15
USP11-206ENST00000469080 CLUAP1Q96AJ1 413 aa16■□□□□ 0.15
USP11-206ENST00000469080 CD109Q6YHK3 1445 aa15.99■□□□□ 0.15
USP11-206ENST00000469080 GGNBP2Q9H3C7 697 aa15.99■□□□□ 0.15
USP11-206ENST00000469080 WDR7Q9Y4E6 1490 aa15.99■□□□□ 0.15
USP11-206ENST00000469080 U2AF1L5P0DN76 240 aaPredicted RBP15.99■□□□□ 0.15
USP11-206ENST00000469080 U2AF1Q01081 240 aaKnown RBP eCLIP15.99■□□□□ 0.15
USP11-206ENST00000469080 DHX29Q7Z478 1369 aaKnown RBP15.98■□□□□ 0.15
USP11-206ENST00000469080 ERBINQ96RT1 1412 aa15.98■□□□□ 0.15
USP11-206ENST00000469080 PPP2R1AP30153 589 aa15.98■□□□□ 0.15
USP11-206ENST00000469080 UHRF1BP1LA0JNW5 1464 aa15.98■□□□□ 0.15
USP11-206ENST00000469080 SPATA31E1Q6ZUB1 1445 aa15.96■□□□□ 0.15
USP11-206ENST00000469080 RRP9O43818 475 aaKnown RBP15.96■□□□□ 0.15
USP11-206ENST00000469080 IDI1Q13907 227 aa15.96■□□□□ 0.14
USP11-206ENST00000469080 C14orf37Q86TY3 774 aa15.95■□□□□ 0.14
USP11-206ENST00000469080 CRBNQ96SW2 442 aa15.95■□□□□ 0.14
USP11-206ENST00000469080 CENPJQ9HC77 1338 aaPredicted RBP15.94■□□□□ 0.14
USP11-206ENST00000469080 PRAG1Q86YV5 1406 aa15.94■□□□□ 0.14
USP11-206ENST00000469080 A2MP01023 1474 aa15.94■□□□□ 0.14
USP11-206ENST00000469080 C20orf194Q5TEA3 1177 aa15.93■□□□□ 0.14
USP11-206ENST00000469080 ADGRL2O95490 1459 aa15.93■□□□□ 0.14
USP11-206ENST00000469080 TCERG1O14776 1098 aaKnown RBP15.92■□□□□ 0.14
USP11-206ENST00000469080 UGGT1Q9NYU2 1555 aa15.92■□□□□ 0.14
USP11-206ENST00000469080 PLA2R1Q13018 1463 aa15.92■□□□□ 0.14
USP11-206ENST00000469080 RRP1P56182 461 aaKnown RBP15.92■□□□□ 0.14
USP11-206ENST00000469080 WAPLQ7Z5K2 1190 aa15.92■□□□□ 0.14
USP11-206ENST00000469080 PER1O15534 1290 aaPredicted RBP15.91■□□□□ 0.14
USP11-206ENST00000469080 CDC42BPBQ9Y5S2 1711 aa15.91■□□□□ 0.14
USP11-206ENST00000469080 RIMBP3CA6NJZ7 1639 aa15.9■□□□□ 0.14
USP11-206ENST00000469080 RIMBP3BA6NNM3 1639 aa15.9■□□□□ 0.14
USP11-206ENST00000469080 RIMBP3Q9UFD9 1639 aa15.9■□□□□ 0.14
USP11-206ENST00000469080 MTHFSP49914 203 aa15.9■□□□□ 0.14
USP11-206ENST00000469080 PRAM1Q96QH2 718 aa15.9■□□□□ 0.14
USP11-206ENST00000469080 ELL2O00472 640 aaPredicted RBP15.9■□□□□ 0.14
USP11-206ENST00000469080 CEBPAP49715 358 aaPredicted RBP15.9■□□□□ 0.14
USP11-206ENST00000469080 NOS1P29475 1434 aa15.89■□□□□ 0.13
USP11-206ENST00000469080 RBM33Q96EV2 1170 aaKnown RBP15.89■□□□□ 0.13
USP11-206ENST00000469080 GOLGA2Q08379 1002 aa15.89■□□□□ 0.13
USP11-206ENST00000469080 BCORL1Q5H9F3 1711 aa15.89■□□□□ 0.13
USP11-206ENST00000469080 RALGAPBQ86X10 1494 aa15.88■□□□□ 0.13
USP11-206ENST00000469080 BCAR3O75815 825 aa15.88■□□□□ 0.13
USP11-206ENST00000469080 VGFO15240 615 aaPredicted RBP15.87■□□□□ 0.13
USP11-206ENST00000469080 PNNQ9H307 717 aaKnown RBP15.87■□□□□ 0.13
USP11-206ENST00000469080 TXNDC2Q86VQ3 553 aa15.87■□□□□ 0.13
USP11-206ENST00000469080 CARD14Q9BXL6 1004 aa15.87■□□□□ 0.13
USP11-206ENST00000469080 BRD4O60885 1362 aaPredicted RBP15.86■□□□□ 0.13
USP11-206ENST00000469080 CFAP53Q96M91 514 aa15.85■□□□□ 0.13
USP11-206ENST00000469080 EIF3AQ14152 1382 aaKnown RBP15.85■□□□□ 0.13
USP11-206ENST00000469080 KLHL34Q8N239 644 aa15.85■□□□□ 0.13
USP11-206ENST00000469080 ARXQ96QS3 562 aa15.85■□□□□ 0.13
USP11-206ENST00000469080 RRAGDQ9NQL2 400 aaPredicted RBP15.84■□□□□ 0.13
USP11-206ENST00000469080 HMOX1P09601 288 aa15.84■□□□□ 0.13
USP11-206ENST00000469080 ADGBQ8N7X0 1667 aa15.84■□□□□ 0.13
USP11-206ENST00000469080 SLC4A3P48751 1232 aa15.84■□□□□ 0.13
USP11-206ENST00000469080 COG6Q9Y2V7 657 aa15.84■□□□□ 0.13
USP11-206ENST00000469080 NCKAP5LQ9HCH0 1330 aa15.83■□□□□ 0.13
USP11-206ENST00000469080 SHANK2Q9UPX8 1470 aa15.83■□□□□ 0.13
USP11-206ENST00000469080 NFKBIBQ15653 356 aa15.83■□□□□ 0.12
USP11-206ENST00000469080 LMOD2Q6P5Q4 547 aa15.83■□□□□ 0.12
USP11-206ENST00000469080 PREX2Q70Z35 1606 aa15.83■□□□□ 0.12
USP11-206ENST00000469080 SLC26A8Q96RN1 970 aa15.83■□□□□ 0.12
USP11-206ENST00000469080 PAXIP1Q6ZW49 1069 aaPredicted RBP15.82■□□□□ 0.12
USP11-206ENST00000469080 CABP1Q9NZU7 370 aa15.82■□□□□ 0.12
USP11-206ENST00000469080 AMER1Q5JTC6 1135 aaPredicted RBP15.82■□□□□ 0.12
USP11-206ENST00000469080 NUTM2GQ5VZR2 741 aa15.82■□□□□ 0.12
USP11-206ENST00000469080 SPINK5Q9NQ38 1064 aaPredicted RBP15.82■□□□□ 0.12
USP11-206ENST00000469080 DUOX2Q9NRD8 1548 aa15.82■□□□□ 0.12
USP11-206ENST00000469080 MYO5CQ9NQX4 1742 aa15.82■□□□□ 0.12
USP11-206ENST00000469080 PANK1Q8TE04 598 aa15.81■□□□□ 0.12
USP11-206ENST00000469080 BBXQ8WY36 941 aaPredicted RBP15.81■□□□□ 0.12
USP11-206ENST00000469080 DMRT2Q9Y5R5 561 aa15.81■□□□□ 0.12
USP11-206ENST00000469080 MAPK8IP3Q9UPT6 1336 aa15.8■□□□□ 0.12
USP11-206ENST00000469080 TSR2Q969E8 191 aaKnown RBP15.8■□□□□ 0.12
USP11-206ENST00000469080 TAF7LQ5H9L4 462 aa15.79■□□□□ 0.12
USP11-206ENST00000469080 EVC2Q86UK5 1308 aa15.79■□□□□ 0.12
USP11-206ENST00000469080 TCP11L2Q8N4U5 519 aa15.79■□□□□ 0.12
USP11-206ENST00000469080 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms