RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 CFAP65Q6ZU64 1925 aaKnown RBP8.23□□□□□ -1.09
SHQ1-205ENST00000468371 BCORL1Q5H9F3 1711 aa8.23□□□□□ -1.09
SHQ1-205ENST00000468371 CDC42BPAQ5VT25 1732 aa8.23□□□□□ -1.09
SHQ1-205ENST00000468371 HSPA1LP34931 641 aa8.23□□□□□ -1.09
SHQ1-205ENST00000468371 SHANK2Q9UPX8 1470 aa8.23□□□□□ -1.09
SHQ1-205ENST00000468371 PTPRTO14522 1441 aa8.23□□□□□ -1.09
SHQ1-205ENST00000468371 CDC42BPBQ9Y5S2 1711 aa8.23□□□□□ -1.09
SHQ1-205ENST00000468371 KDM5CP41229 1560 aa8.23□□□□□ -1.09
SHQ1-205ENST00000468371 SF3B2Q13435 895 aaKnown RBP8.22□□□□□ -1.09
SHQ1-205ENST00000468371 CAMSAP1Q5T5Y3 1602 aa8.22□□□□□ -1.09
SHQ1-205ENST00000468371 TMEM94Q12767 1356 aa8.22□□□□□ -1.09
SHQ1-205ENST00000468371 SCAF11Q99590 1463 aaKnown RBP8.22□□□□□ -1.09
SHQ1-205ENST00000468371 ARHGEF5Q12774 1597 aa8.22□□□□□ -1.09
SHQ1-205ENST00000468371 LRRC59Q96AG4 307 aaKnown RBP8.21□□□□□ -1.09
SHQ1-205ENST00000468371 HIRIP3Q9BW71 556 aaPredicted RBP8.21□□□□□ -1.09
SHQ1-205ENST00000468371 RICTORQ6R327 1708 aa8.21□□□□□ -1.09
SHQ1-205ENST00000468371 MINK1Q8N4C8 1332 aaPredicted RBP8.21□□□□□ -1.09
SHQ1-205ENST00000468371 EVA1CP58658 441 aa8.21□□□□□ -1.1
SHQ1-205ENST00000468371 ABCA6Q8N139 1617 aa8.21□□□□□ -1.1
SHQ1-205ENST00000468371 RAB3GAP2Q9H2M9 1393 aa8.2□□□□□ -1.1
SHQ1-205ENST00000468371 STAC3Q96MF2 364 aa8.2□□□□□ -1.1
SHQ1-205ENST00000468371 SOX12O15370 315 aa8.2□□□□□ -1.1
SHQ1-205ENST00000468371 ERVK-7P63135 1459 aa8.2□□□□□ -1.1
SHQ1-205ENST00000468371 C8orf37Q96NL8 207 aa8.19□□□□□ -1.1
SHQ1-205ENST00000468371 FOXO3O43524 673 aa8.19□□□□□ -1.1
SHQ1-205ENST00000468371 XPCQ01831 940 aaPredicted RBP8.19□□□□□ -1.1
SHQ1-205ENST00000468371 HFM1A2PYH4 1435 aa8.19□□□□□ -1.1
SHQ1-205ENST00000468371 GPRASP1Q5JY77 1395 aa8.19□□□□□ -1.1
SHQ1-205ENST00000468371 ANKRD30BQ9BXX2 1392 aa8.19□□□□□ -1.1
SHQ1-205ENST00000468371 CSB-PGBD3P0DP91 1061 aa8.19□□□□□ -1.1
SHQ1-205ENST00000468371 CARD11Q9BXL7 1154 aa8.19□□□□□ -1.1
SHQ1-205ENST00000468371 ADGBQ8N7X0 1667 aa8.18□□□□□ -1.1
SHQ1-205ENST00000468371 FRMPD1Q5SYB0 1578 aa8.18□□□□□ -1.1
SHQ1-205ENST00000468371 DDX10Q13206 875 aaKnown RBP8.18□□□□□ -1.1
SHQ1-205ENST00000468371 CFAP70Q5T0N1 1121 aa8.18□□□□□ -1.1
SHQ1-205ENST00000468371 RRBP1Q9P2E9 1410 aaKnown RBP8.18□□□□□ -1.1
SHQ1-205ENST00000468371 KIDINS220Q9ULH0 1771 aa8.18□□□□□ -1.1
SHQ1-205ENST00000468371 CLTCQ00610 1675 aaKnown RBP8.17□□□□□ -1.1
SHQ1-205ENST00000468371 TCOF1Q13428 1488 aaKnown RBP8.17□□□□□ -1.1
SHQ1-205ENST00000468371 PRAM1Q96QH2 718 aa8.17□□□□□ -1.1
SHQ1-205ENST00000468371 PMFBP1Q8TBY8 1022 aa8.17□□□□□ -1.1
SHQ1-205ENST00000468371 SUPT16HQ9Y5B9 1047 aaKnown RBP8.17□□□□□ -1.1
SHQ1-205ENST00000468371 LRPPRCP42704 1394 aaKnown RBP8.17□□□□□ -1.1
SHQ1-205ENST00000468371 SLC24A1O60721 1099 aa8.17□□□□□ -1.1
SHQ1-205ENST00000468371 EFCAB6Q5THR3 1501 aa8.17□□□□□ -1.1
SHQ1-205ENST00000468371 WAPLQ7Z5K2 1190 aa8.16□□□□□ -1.1
SHQ1-205ENST00000468371 ABCC3O15438 1527 aa8.16□□□□□ -1.1
SHQ1-205ENST00000468371 ADAMTSL3P82987 1691 aa8.16□□□□□ -1.1
SHQ1-205ENST00000468371 NPHP3Q7Z494 1330 aa8.16□□□□□ -1.1
SHQ1-205ENST00000468371 CEP170BQ9Y4F5 1589 aaPredicted RBP8.15□□□□□ -1.1
SHQ1-205ENST00000468371 ZNF772Q68DY9 489 aaPredicted RBP8.15□□□□□ -1.1
SHQ1-205ENST00000468371 ARHGAP31Q2M1Z3 1444 aa8.15□□□□□ -1.1
SHQ1-205ENST00000468371 SIN3AQ96ST3 1273 aa8.15□□□□□ -1.1
SHQ1-205ENST00000468371 ANP32EQ9BTT0 268 aa8.15□□□□□ -1.1
SHQ1-205ENST00000468371 NAIPQ13075 1403 aa8.15□□□□□ -1.1
SHQ1-205ENST00000468371 ANP32CO43423 234 aa8.15□□□□□ -1.11
SHQ1-205ENST00000468371 PLA2R1Q13018 1463 aa8.15□□□□□ -1.11
SHQ1-205ENST00000468371 CDCA8Q53HL2 280 aa8.14□□□□□ -1.11
SHQ1-205ENST00000468371 HDGFL2Q7Z4V5 671 aaPredicted RBP8.14□□□□□ -1.11
SHQ1-205ENST00000468371 PHF8Q9UPP1 1060 aa8.14□□□□□ -1.11
SHQ1-205ENST00000468371 DNMT1P26358 1616 aaKnown RBP8.14□□□□□ -1.11
SHQ1-205ENST00000468371 PLEKHG1Q9ULL1 1385 aa8.14□□□□□ -1.11
SHQ1-205ENST00000468371 RPRD2Q5VT52 1461 aaKnown RBP8.14□□□□□ -1.11
SHQ1-205ENST00000468371 INO80Q9ULG1 1556 aaPredicted RBP8.13□□□□□ -1.11
SHQ1-205ENST00000468371 KRT28Q7Z3Y7 464 aa8.13□□□□□ -1.11
SHQ1-205ENST00000468371 PRDM11Q9NQV5 511 aa8.13□□□□□ -1.11
SHQ1-205ENST00000468371 REREQ9P2R6 1566 aa8.13□□□□□ -1.11
SHQ1-205ENST00000468371 IRX6P78412 446 aaPredicted RBP8.13□□□□□ -1.11
SHQ1-205ENST00000468371 NOS1P29475 1434 aa8.13□□□□□ -1.11
SHQ1-205ENST00000468371 RXRBP28702 533 aa8.12□□□□□ -1.11
SHQ1-205ENST00000468371 USP35Q9P2H5 1018 aa8.12□□□□□ -1.11
SHQ1-205ENST00000468371 ADGRL2O95490 1459 aa8.12□□□□□ -1.11
SHQ1-205ENST00000468371 ADGRF5Q8IZF2 1346 aa8.12□□□□□ -1.11
SHQ1-205ENST00000468371 NUTM2GQ5VZR2 741 aa8.12□□□□□ -1.11
SHQ1-205ENST00000468371 STRN4Q9NRL3 753 aa8.12□□□□□ -1.11
SHQ1-205ENST00000468371 PREX1Q8TCU6 1659 aa8.11□□□□□ -1.11
SHQ1-205ENST00000468371 EIF3AQ14152 1382 aaKnown RBP8.11□□□□□ -1.11
SHQ1-205ENST00000468371 ABTB2Q8N961 1025 aa8.11□□□□□ -1.11
SHQ1-205ENST00000468371 EVC2Q86UK5 1308 aa8.11□□□□□ -1.11
SHQ1-205ENST00000468371 ROCK2O75116 1388 aaKnown RBP8.11□□□□□ -1.11
SHQ1-205ENST00000468371 DCAF8L1A6NGE4 600 aa8.11□□□□□ -1.11
SHQ1-205ENST00000468371 L3MBTL2Q969R5 705 aa8.11□□□□□ -1.11
SHQ1-205ENST00000468371 CLSPNQ9HAW4 1339 aa8.1□□□□□ -1.11
SHQ1-205ENST00000468371 PPM1GO15355 546 aaPredicted RBP8.1□□□□□ -1.11
SHQ1-205ENST00000468371 ORAI2Q96SN7 254 aa8.1□□□□□ -1.11
SHQ1-205ENST00000468371 TERF2IPQ9NYB0 399 aa8.1□□□□□ -1.11
SHQ1-205ENST00000468371 PIK3R4Q99570 1358 aa8.1□□□□□ -1.11
SHQ1-205ENST00000468371 QTRT2Q9H974 415 aaKnown RBP8.09□□□□□ -1.11
SHQ1-205ENST00000468371 CENPJQ9HC77 1338 aaPredicted RBP8.09□□□□□ -1.11
SHQ1-205ENST00000468371 JCADQ9P266 1359 aa8.09□□□□□ -1.11
SHQ1-205ENST00000468371 NLRP6P59044 892 aa8.09□□□□□ -1.11
SHQ1-205ENST00000468371 BCL11AQ9H165 835 aa8.09□□□□□ -1.11
SHQ1-205ENST00000468371 USP21Q9UK80 565 aa8.09□□□□□ -1.11
SHQ1-205ENST00000468371 CPS1P31327 1500 aa8.09□□□□□ -1.11
SHQ1-205ENST00000468371 MAST1Q9Y2H9 1570 aa8.09□□□□□ -1.11
SHQ1-205ENST00000468371 PDE3BQ13370 1112 aa8.09□□□□□ -1.11
SHQ1-205ENST00000468371 NLRP13Q86W25 1043 aa8.08□□□□□ -1.12
SHQ1-205ENST00000468371 DDX17Q92841 729 aaKnown RBP8.08□□□□□ -1.12
SHQ1-205ENST00000468371 PLXNC1O60486 1568 aa8.08□□□□□ -1.12
SHQ1-205ENST00000468371 LRRIQ1Q96JM4 1722 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms