RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 ADAMTS8Q9UP79 889 aa17.36■□□□□ 0.37
BRAT1-203ENST00000467558 RIPK4P57078 832 aa17.36■□□□□ 0.37
BRAT1-203ENST00000467558 SLC4A10Q6U841 1118 aa17.36■□□□□ 0.37
BRAT1-203ENST00000467558 ELL2O00472 640 aaPredicted RBP17.35■□□□□ 0.37
BRAT1-203ENST00000467558 PPP2R1AP30153 589 aa17.35■□□□□ 0.37
BRAT1-203ENST00000467558 ERBINQ96RT1 1412 aa17.35■□□□□ 0.37
BRAT1-203ENST00000467558 FGD1P98174 961 aa17.35■□□□□ 0.37
BRAT1-203ENST00000467558 GPATCH8Q9UKJ3 1502 aaKnown RBP17.35■□□□□ 0.37
BRAT1-203ENST00000467558 MTHFSP49914 203 aa17.35■□□□□ 0.37
BRAT1-203ENST00000467558 PRAM1Q96QH2 718 aa17.34■□□□□ 0.37
BRAT1-203ENST00000467558 TXNDC2Q86VQ3 553 aa17.34■□□□□ 0.37
BRAT1-203ENST00000467558 ADGRL1O94910 1474 aa17.34■□□□□ 0.37
BRAT1-203ENST00000467558 CRBNQ96SW2 442 aa17.33■□□□□ 0.37
BRAT1-203ENST00000467558 SLC12A5Q9H2X9 1139 aa17.32■□□□□ 0.36
BRAT1-203ENST00000467558 PSME1Q06323 249 aa17.32■□□□□ 0.36
BRAT1-203ENST00000467558 COG6Q9Y2V7 657 aa17.31■□□□□ 0.36
BRAT1-203ENST00000467558 RAPGEF6Q8TEU7 1601 aa17.31■□□□□ 0.36
BRAT1-203ENST00000467558 ATP10BO94823 1461 aa17.31■□□□□ 0.36
BRAT1-203ENST00000467558 NUP153P49790 1475 aaKnown RBP17.31■□□□□ 0.36
BRAT1-203ENST00000467558 UGGT2Q9NYU1 1516 aa17.3■□□□□ 0.36
BRAT1-203ENST00000467558 KIAA1211Q6ZU35 1233 aa17.3■□□□□ 0.36
BRAT1-203ENST00000467558 TRIM44Q96DX7 344 aaPredicted RBP17.3■□□□□ 0.36
BRAT1-203ENST00000467558 TEFQ10587 303 aa17.29■□□□□ 0.36
BRAT1-203ENST00000467558 PNISRQ8TF01 805 aaKnown RBP17.29■□□□□ 0.36
BRAT1-203ENST00000467558 RPRD2Q5VT52 1461 aaKnown RBP17.29■□□□□ 0.36
BRAT1-203ENST00000467558 THEMISQ8N1K5 641 aaPredicted RBP17.29■□□□□ 0.36
BRAT1-203ENST00000467558 ZNF330Q9Y3S2 320 aaPredicted RBP17.29■□□□□ 0.36
BRAT1-203ENST00000467558 C1orf141Q5JVX7 400 aa17.29■□□□□ 0.36
BRAT1-203ENST00000467558 PTPRKQ15262 1439 aa17.28■□□□□ 0.36
BRAT1-203ENST00000467558 ADAMTS12P58397 1594 aa17.27■□□□□ 0.36
BRAT1-203ENST00000467558 CTTNBP2Q8WZ74 1663 aa17.27■□□□□ 0.36
BRAT1-203ENST00000467558 DDX19BQ9UMR2 479 aa17.27■□□□□ 0.35
BRAT1-203ENST00000467558 GNAI1P63096 354 aa17.27■□□□□ 0.35
BRAT1-203ENST00000467558 TCP11L2Q8N4U5 519 aa17.27■□□□□ 0.35
BRAT1-203ENST00000467558 DZIP1LQ8IYY4 767 aaKnown RBP17.26■□□□□ 0.35
BRAT1-203ENST00000467558 IPO9Q96P70 1041 aaKnown RBP17.26■□□□□ 0.35
BRAT1-203ENST00000467558 FANCAO15360 1455 aa17.26■□□□□ 0.35
BRAT1-203ENST00000467558 HMOX1P09601 288 aa17.25■□□□□ 0.35
BRAT1-203ENST00000467558 ZRSR1Q15695 479 aaKnown RBP17.25■□□□□ 0.35
BRAT1-203ENST00000467558 KIF21AQ7Z4S6 1674 aa17.25■□□□□ 0.35
BRAT1-203ENST00000467558 API5Q9BZZ5 524 aaKnown RBP17.25■□□□□ 0.35
BRAT1-203ENST00000467558 MFAP1P55081 439 aaKnown RBP17.24■□□□□ 0.35
BRAT1-203ENST00000467558 CDK19Q9BWU1 502 aa17.24■□□□□ 0.35
BRAT1-203ENST00000467558 NLRP6P59044 892 aa17.24■□□□□ 0.35
BRAT1-203ENST00000467558 KIF16BQ96L93 1317 aa17.23■□□□□ 0.35
BRAT1-203ENST00000467558 SPRYD3Q8NCJ5 442 aa17.23■□□□□ 0.35
BRAT1-203ENST00000467558 GPATCH3Q96I76 525 aa17.23■□□□□ 0.35
BRAT1-203ENST00000467558 PDE4AP27815 886 aa17.22■□□□□ 0.35
BRAT1-203ENST00000467558 ZNF692Q9BU19 519 aaPredicted RBP17.22■□□□□ 0.35
BRAT1-203ENST00000467558 CABP1Q9NZU7 370 aa17.22■□□□□ 0.35
BRAT1-203ENST00000467558 FAM161AQ3B820 660 aa17.22■□□□□ 0.35
BRAT1-203ENST00000467558 CDCA7LQ96GN5 454 aa17.22■□□□□ 0.35
BRAT1-203ENST00000467558 POGZQ7Z3K3 1410 aa17.22■□□□□ 0.35
BRAT1-203ENST00000467558 ATAD2Q6PL18 1390 aa17.21■□□□□ 0.35
BRAT1-203ENST00000467558 AAMPQ13685 434 aa17.21■□□□□ 0.35
BRAT1-203ENST00000467558 CCDC9Q9Y3X0 531 aaKnown RBP17.21■□□□□ 0.35
BRAT1-203ENST00000467558 PLCH2O75038 1416 aa17.21■□□□□ 0.35
BRAT1-203ENST00000467558 C11orf95C9JLR9 678 aaPredicted RBP17.21■□□□□ 0.35
BRAT1-203ENST00000467558 NAP1L2Q9ULW6 460 aaPredicted RBP17.21■□□□□ 0.35
BRAT1-203ENST00000467558 DHX29Q7Z478 1369 aaKnown RBP17.21■□□□□ 0.35
BRAT1-203ENST00000467558 KIAA0556O60303 1618 aa17.21■□□□□ 0.35
BRAT1-203ENST00000467558 TRIM6-TRIM34B2RNG4 842 aa17.2■□□□□ 0.34
BRAT1-203ENST00000467558 ATF3P18847 181 aa17.2■□□□□ 0.34
BRAT1-203ENST00000467558 CCDC184Q52MB2 194 aa17.2■□□□□ 0.34
BRAT1-203ENST00000467558 TPRNQ4KMQ1 711 aa17.19■□□□□ 0.34
BRAT1-203ENST00000467558 ANKRD45Q5TZF3 282 aa17.19■□□□□ 0.34
BRAT1-203ENST00000467558 DENND4BO75064 1496 aaPredicted RBP17.19■□□□□ 0.34
BRAT1-203ENST00000467558 SLKQ9H2G2 1235 aaPredicted RBP17.18■□□□□ 0.34
BRAT1-203ENST00000467558 CHMP3Q9Y3E7 222 aa17.18■□□□□ 0.34
BRAT1-203ENST00000467558 RTEL1-TNFRSF6BF6WH68 1400 aa17.18■□□□□ 0.34
BRAT1-203ENST00000467558 WDR62O43379 1518 aa17.17■□□□□ 0.34
BRAT1-203ENST00000467558 MAPKBP1O60336 1514 aa17.17■□□□□ 0.34
BRAT1-203ENST00000467558 PRKAR2BP31323 418 aa17.16■□□□□ 0.34
BRAT1-203ENST00000467558 EVA1CP58658 441 aa17.16■□□□□ 0.34
BRAT1-203ENST00000467558 TCOF1Q13428 1488 aaKnown RBP17.16■□□□□ 0.34
BRAT1-203ENST00000467558 GORABQ5T7V8 394 aa17.16■□□□□ 0.34
BRAT1-203ENST00000467558 PTMAP06454 111 aaKnown RBP17.16■□□□□ 0.34
BRAT1-203ENST00000467558 TAF7LQ5H9L4 462 aa17.16■□□□□ 0.34
BRAT1-203ENST00000467558 SLC26A8Q96RN1 970 aa17.16■□□□□ 0.34
BRAT1-203ENST00000467558 TSPYL4Q9UJ04 414 aa17.16■□□□□ 0.34
BRAT1-203ENST00000467558 GPRASP1Q5JY77 1395 aa17.16■□□□□ 0.34
BRAT1-203ENST00000467558 GOLGA6L4A6NEF3 574 aa17.16■□□□□ 0.34
BRAT1-203ENST00000467558 IDI1Q13907 227 aa17.15■□□□□ 0.34
BRAT1-203ENST00000467558 TTC5Q8N0Z6 440 aa17.15■□□□□ 0.34
BRAT1-203ENST00000467558 ABTB2Q8N961 1025 aa17.15■□□□□ 0.34
BRAT1-203ENST00000467558 ITSN2Q9NZM3 1697 aa17.15■□□□□ 0.34
BRAT1-203ENST00000467558 EIF2S2P20042 333 aaKnown RBP17.15■□□□□ 0.34
BRAT1-203ENST00000467558 GBP4Q96PP9 640 aa17.15■□□□□ 0.34
BRAT1-203ENST00000467558 NUTM2GQ5VZR2 741 aa17.15■□□□□ 0.34
BRAT1-203ENST00000467558 ADGRF5Q8IZF2 1346 aa17.14■□□□□ 0.33
BRAT1-203ENST00000467558 EIF4G3O43432 1585 aaKnown RBP17.14■□□□□ 0.33
BRAT1-203ENST00000467558 PPP6R1Q9UPN7 881 aa17.14■□□□□ 0.33
BRAT1-203ENST00000467558 NUP160Q12769 1436 aa17.14■□□□□ 0.33
BRAT1-203ENST00000467558 RAPGEF4Q8WZA2 1011 aa17.14■□□□□ 0.33
BRAT1-203ENST00000467558 NEXNQ0ZGT2 675 aa17.13■□□□□ 0.33
BRAT1-203ENST00000467558 CCDC61Q9Y6R9 512 aa17.13■□□□□ 0.33
BRAT1-203ENST00000467558 CFAP43Q8NDM7 1665 aa17.13■□□□□ 0.33
BRAT1-203ENST00000467558 FKBP5Q13451 457 aaPredicted RBP17.13■□□□□ 0.33
BRAT1-203ENST00000467558 ANKLE2Q86XL3 938 aa17.13■□□□□ 0.33
BRAT1-203ENST00000467558 PROSER2Q86WR7 435 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms