RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 CHGAP10645 457 aaKnown RBP17.22■□□□□ 0.35
HDLBP-231ENST00000467435 NBPF1Q3BBV0 1214 aa17.21■□□□□ 0.35
HDLBP-231ENST00000467435 KIF7Q2M1P5 1343 aa17.2■□□□□ 0.34
HDLBP-231ENST00000467435 C11orf95C9JLR9 678 aaPredicted RBP17.19■□□□□ 0.34
HDLBP-231ENST00000467435 SLC52A1Q9NWF4 448 aa17.19■□□□□ 0.34
HDLBP-231ENST00000467435 SETBP1Q9Y6X0 1596 aa17.19■□□□□ 0.34
HDLBP-231ENST00000467435 ARID4BQ4LE39 1312 aaPredicted RBP17.19■□□□□ 0.34
HDLBP-231ENST00000467435 RPGRIP1LQ68CZ1 1315 aa17.18■□□□□ 0.34
HDLBP-231ENST00000467435 PIK3C2GO75747 1445 aa17.17■□□□□ 0.34
HDLBP-231ENST00000467435 ESF1Q9H501 851 aaKnown RBP17.17■□□□□ 0.34
HDLBP-231ENST00000467435 SCAF11Q99590 1463 aaKnown RBP17.17■□□□□ 0.34
HDLBP-231ENST00000467435 ADGRF5Q8IZF2 1346 aa17.17■□□□□ 0.34
HDLBP-231ENST00000467435 ST20-MTHFSA0A0A6YYL1 179 aa17.15■□□□□ 0.34
HDLBP-231ENST00000467435 IDI1Q13907 227 aa17.15■□□□□ 0.34
HDLBP-231ENST00000467435 FBXO31Q5XUX0 539 aaPredicted RBP17.15■□□□□ 0.34
HDLBP-231ENST00000467435 C3P01024 1663 aa17.15■□□□□ 0.34
HDLBP-231ENST00000467435 MYO3AQ8NEV4 1616 aa17.14■□□□□ 0.33
HDLBP-231ENST00000467435 KDM5AP29375 1690 aaKnown RBP17.13■□□□□ 0.33
HDLBP-231ENST00000467435 ZMYM3Q14202 1370 aa17.13■□□□□ 0.33
HDLBP-231ENST00000467435 EIF3AQ14152 1382 aaKnown RBP17.11■□□□□ 0.33
HDLBP-231ENST00000467435 ZFYVE9O95405 1425 aa17.11■□□□□ 0.33
HDLBP-231ENST00000467435 ADGRB1O14514 1584 aa17.11■□□□□ 0.33
HDLBP-231ENST00000467435 ANP32CO43423 234 aa17.1■□□□□ 0.33
HDLBP-231ENST00000467435 A2ML1A8K2U0 1454 aa17.1■□□□□ 0.33
HDLBP-231ENST00000467435 UBR1Q8IWV7 1749 aa17.1■□□□□ 0.33
HDLBP-231ENST00000467435 CFAP70Q5T0N1 1121 aa17.09■□□□□ 0.33
HDLBP-231ENST00000467435 QRICH2Q9H0J4 1663 aa17.09■□□□□ 0.33
HDLBP-231ENST00000467435 ARHGEF28Q8N1W1 1705 aaKnown RBP17.09■□□□□ 0.33
HDLBP-231ENST00000467435 TNRQ92752 1358 aa17.08■□□□□ 0.32
HDLBP-231ENST00000467435 POLR3GLQ9BT43 218 aa17.08■□□□□ 0.32
HDLBP-231ENST00000467435 RIMS1Q86UR5 1692 aaKnown RBP17.07■□□□□ 0.32
HDLBP-231ENST00000467435 DISP3Q9P2K9 1392 aa17.06■□□□□ 0.32
HDLBP-231ENST00000467435 VGFO15240 615 aaPredicted RBP17.06■□□□□ 0.32
HDLBP-231ENST00000467435 TESK2Q96S53 571 aa17.05■□□□□ 0.32
HDLBP-231ENST00000467435 STAG3Q9UJ98 1225 aa17.05■□□□□ 0.32
HDLBP-231ENST00000467435 ASXL1Q8IXJ9 1541 aa17.05■□□□□ 0.32
HDLBP-231ENST00000467435 SETD1AO15047 1707 aaKnown RBP17.04■□□□□ 0.32
HDLBP-231ENST00000467435 C14orf93Q9H972 538 aaKnown RBP17.04■□□□□ 0.32
HDLBP-231ENST00000467435 NUTM2DQ5VT03 806 aaPredicted RBP17.03■□□□□ 0.32
HDLBP-231ENST00000467435 MYOM1P52179 1685 aa17.03■□□□□ 0.32
HDLBP-231ENST00000467435 RIMS2Q9UQ26 1411 aa17.03■□□□□ 0.32
HDLBP-231ENST00000467435 NLRP1Q9C000 1473 aa17.02■□□□□ 0.32
HDLBP-231ENST00000467435 TMF1P82094 1093 aa17.02■□□□□ 0.32
HDLBP-231ENST00000467435 ALKQ9UM73 1620 aa17.01■□□□□ 0.31
HDLBP-231ENST00000467435 ADAMTSL3P82987 1691 aa17.01■□□□□ 0.31
HDLBP-231ENST00000467435 NRXN3Q9Y4C0 1643 aa17■□□□□ 0.31
HDLBP-231ENST00000467435 CCER2I3L3R5 266 aa17■□□□□ 0.31
HDLBP-231ENST00000467435 YTHDC1Q96MU7 727 aaKnown RBP17■□□□□ 0.31
HDLBP-231ENST00000467435 SBNO2Q9Y2G9 1366 aa16.98■□□□□ 0.31
HDLBP-231ENST00000467435 TMEM132EQ6IEE7 984 aa16.95■□□□□ 0.3
HDLBP-231ENST00000467435 CENPJQ9HC77 1338 aaPredicted RBP16.95■□□□□ 0.3
HDLBP-231ENST00000467435 KNDC1Q76NI1 1749 aa16.94■□□□□ 0.3
HDLBP-231ENST00000467435 CENPBP07199 599 aaPredicted RBP16.94■□□□□ 0.3
HDLBP-231ENST00000467435 CEBPAP49715 358 aaPredicted RBP16.94■□□□□ 0.3
HDLBP-231ENST00000467435 CDCA8Q53HL2 280 aa16.94■□□□□ 0.3
HDLBP-231ENST00000467435 TRAK1Q9UPV9 953 aa16.94■□□□□ 0.3
HDLBP-231ENST00000467435 PTPRMP28827 1452 aa16.93■□□□□ 0.3
HDLBP-231ENST00000467435 PRKRIP1Q9H875 184 aaPredicted RBP16.93■□□□□ 0.3
HDLBP-231ENST00000467435 ZNF142P52746 1687 aaPredicted RBP16.93■□□□□ 0.3
HDLBP-231ENST00000467435 TMEM2Q9UHN6 1383 aa16.92■□□□□ 0.3
HDLBP-231ENST00000467435 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.92■□□□□ 0.3
HDLBP-231ENST00000467435 YTHDC2Q9H6S0 1430 aaKnown RBP16.92■□□□□ 0.3
HDLBP-231ENST00000467435 CEP170BQ9Y4F5 1589 aaPredicted RBP16.91■□□□□ 0.3
HDLBP-231ENST00000467435 SLC24A1O60721 1099 aa16.91■□□□□ 0.3
HDLBP-231ENST00000467435 SLIT1O75093 1534 aa16.91■□□□□ 0.3
HDLBP-231ENST00000467435 DLC1Q96QB1 1528 aa16.91■□□□□ 0.3
HDLBP-231ENST00000467435 PLPPR3Q6T4P5 718 aa16.9■□□□□ 0.3
HDLBP-231ENST00000467435 SENP3Q9H4L4 574 aaPredicted RBP16.9■□□□□ 0.3
HDLBP-231ENST00000467435 TULP4Q9NRJ4 1543 aa16.9■□□□□ 0.3
HDLBP-231ENST00000467435 ARHGAP23Q9P227 1491 aa16.88■□□□□ 0.29
HDLBP-231ENST00000467435 HDGFP51858 240 aaKnown RBP16.87■□□□□ 0.29
HDLBP-231ENST00000467435 KTN1Q86UP2 1357 aaKnown RBP16.86■□□□□ 0.29
HDLBP-231ENST00000467435 LRPPRCP42704 1394 aaKnown RBP16.85■□□□□ 0.29
HDLBP-231ENST00000467435 CPS1P31327 1500 aa16.85■□□□□ 0.29
HDLBP-231ENST00000467435 PANK3Q9H999 370 aa16.84■□□□□ 0.29
HDLBP-231ENST00000467435 STK26Q9P289 416 aa16.84■□□□□ 0.29
HDLBP-231ENST00000467435 PLEKHG1Q9ULL1 1385 aa16.84■□□□□ 0.29
HDLBP-231ENST00000467435 DIP2AQ14689 1571 aa16.83■□□□□ 0.28
HDLBP-231ENST00000467435 ADAMTS13Q76LX8 1427 aa16.82■□□□□ 0.28
HDLBP-231ENST00000467435 CNGB1Q14028 1251 aaPredicted RBP16.82■□□□□ 0.28
HDLBP-231ENST00000467435 PARD3Q8TEW0 1356 aa16.81■□□□□ 0.28
HDLBP-231ENST00000467435 PER1O15534 1290 aaPredicted RBP16.81■□□□□ 0.28
HDLBP-231ENST00000467435 METP08581 1390 aa16.8■□□□□ 0.28
HDLBP-231ENST00000467435 EVC2Q86UK5 1308 aa16.8■□□□□ 0.28
HDLBP-231ENST00000467435 USP32Q8NFA0 1604 aa16.8■□□□□ 0.28
HDLBP-231ENST00000467435 TECPR2O15040 1411 aa16.79■□□□□ 0.28
HDLBP-231ENST00000467435 RALBP1Q15311 655 aa16.79■□□□□ 0.28
HDLBP-231ENST00000467435 PRAM1Q96QH2 718 aa16.79■□□□□ 0.28
HDLBP-231ENST00000467435 MRS2Q9HD23 443 aa16.79■□□□□ 0.28
HDLBP-231ENST00000467435 ABCC11Q96J66 1382 aa16.78■□□□□ 0.28
HDLBP-231ENST00000467435 CCDC184Q52MB2 194 aa16.78■□□□□ 0.28
HDLBP-231ENST00000467435 BCANQ96GW7 911 aa16.78■□□□□ 0.28
HDLBP-231ENST00000467435 POGKQ9P215 609 aa16.78■□□□□ 0.28
HDLBP-231ENST00000467435 EID1Q9Y6B2 187 aa16.78■□□□□ 0.28
HDLBP-231ENST00000467435 MED14O60244 1454 aa16.78■□□□□ 0.28
HDLBP-231ENST00000467435 MYBBP1AQ9BQG0 1328 aaKnown RBP16.77■□□□□ 0.28
HDLBP-231ENST00000467435 SETD1BQ9UPS6 1966 aaKnown RBP16.77■□□□□ 0.28
HDLBP-231ENST00000467435 LTKP29376 864 aa16.77■□□□□ 0.28
HDLBP-231ENST00000467435 SAFB2Q14151 953 aaKnown RBP eCLIP16.77■□□□□ 0.28
HDLBP-231ENST00000467435 TXNDC2Q86VQ3 553 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms