RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 ARID4AP29374 1257 aaPredicted RBP10□□□□□ -0.81
SPTBN1-204ENST00000467371 STK24Q9Y6E0 443 aa10□□□□□ -0.81
SPTBN1-204ENST00000467371 ZNF16P17020 682 aaPredicted RBP10□□□□□ -0.81
SPTBN1-204ENST00000467371 GTF2E1P29083 439 aaPredicted RBP10□□□□□ -0.81
SPTBN1-204ENST00000467371 DPH6Q7L8W6 267 aa10□□□□□ -0.81
SPTBN1-204ENST00000467371 CARNS1A5YM72 827 aa10□□□□□ -0.81
SPTBN1-204ENST00000467371 MMP14P50281 582 aa10□□□□□ -0.81
SPTBN1-204ENST00000467371 DNAJC14Q6Y2X3 702 aaPredicted RBP10□□□□□ -0.81
SPTBN1-204ENST00000467371 CLGNO14967 610 aa9.99□□□□□ -0.81
SPTBN1-204ENST00000467371 TBC1D12O60347 775 aa9.99□□□□□ -0.81
SPTBN1-204ENST00000467371 PAX3P23760 479 aa9.99□□□□□ -0.81
SPTBN1-204ENST00000467371 RTL5Q5HYW3 569 aaPredicted RBP9.99□□□□□ -0.81
SPTBN1-204ENST00000467371 EIF4G1Q04637 1599 aaKnown RBP9.99□□□□□ -0.81
SPTBN1-204ENST00000467371 PNMA2Q9UL42 364 aa9.99□□□□□ -0.81
SPTBN1-204ENST00000467371 CCDC96Q2M329 555 aa9.98□□□□□ -0.81
SPTBN1-204ENST00000467371 RYDENQ9NUL5 291 aaKnown RBP9.98□□□□□ -0.81
SPTBN1-204ENST00000467371 SMARCA4P51532 1647 aa9.98□□□□□ -0.81
SPTBN1-204ENST00000467371 U2SURPO15042 1029 aaKnown RBP9.97□□□□□ -0.81
SPTBN1-204ENST00000467371 NOM1Q5C9Z4 860 aaKnown RBP9.97□□□□□ -0.81
SPTBN1-204ENST00000467371 VGFO15240 615 aaPredicted RBP9.97□□□□□ -0.81
SPTBN1-204ENST00000467371 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.97□□□□□ -0.81
SPTBN1-204ENST00000467371 C11orf95C9JLR9 678 aaPredicted RBP9.96□□□□□ -0.81
SPTBN1-204ENST00000467371 CDCA8Q53HL2 280 aa9.96□□□□□ -0.81
SPTBN1-204ENST00000467371 PPP1R1BQ9UD71 204 aaPredicted RBP9.96□□□□□ -0.81
SPTBN1-204ENST00000467371 STK25O00506 426 aa9.96□□□□□ -0.82
SPTBN1-204ENST00000467371 SF3A1Q15459 793 aaKnown RBP9.96□□□□□ -0.82
SPTBN1-204ENST00000467371 FAN1Q9Y2M0 1017 aa9.96□□□□□ -0.82
SPTBN1-204ENST00000467371 NAALADL2Q58DX5 795 aa9.95□□□□□ -0.82
SPTBN1-204ENST00000467371 ZNF219Q9P2Y4 722 aaPredicted RBP9.95□□□□□ -0.82
SPTBN1-204ENST00000467371 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.95□□□□□ -0.82
SPTBN1-204ENST00000467371 SMYD5Q6GMV2 418 aa9.95□□□□□ -0.82
SPTBN1-204ENST00000467371 NBPF11Q86T75 865 aa9.95□□□□□ -0.82
SPTBN1-204ENST00000467371 COG6Q9Y2V7 657 aa9.94□□□□□ -0.82
SPTBN1-204ENST00000467371 TOP2AP11388 1531 aaKnown RBP9.94□□□□□ -0.82
SPTBN1-204ENST00000467371 TTC36A6NLP5 189 aa9.94□□□□□ -0.82
SPTBN1-204ENST00000467371 LIG1P18858 919 aa9.94□□□□□ -0.82
SPTBN1-204ENST00000467371 C4orf46Q504U0 113 aa9.94□□□□□ -0.82
SPTBN1-204ENST00000467371 SMARCA2P51531 1590 aa9.94□□□□□ -0.82
SPTBN1-204ENST00000467371 EGFLAMQ63HQ2 1017 aa9.94□□□□□ -0.82
SPTBN1-204ENST00000467371 SPOCK3Q9BQ16 436 aa9.93□□□□□ -0.82
SPTBN1-204ENST00000467371 NOP58Q9Y2X3 529 aaKnown RBP9.93□□□□□ -0.82
SPTBN1-204ENST00000467371 SH3BP5O60239 455 aa9.92□□□□□ -0.82
SPTBN1-204ENST00000467371 PPP4CP60510 307 aa9.92□□□□□ -0.82
SPTBN1-204ENST00000467371 NOP9Q86U38 636 aaKnown RBP9.92□□□□□ -0.82
SPTBN1-204ENST00000467371 SSFA2P28290 1259 aa9.92□□□□□ -0.82
SPTBN1-204ENST00000467371 E2F4Q16254 413 aa9.92□□□□□ -0.82
SPTBN1-204ENST00000467371 GPIHBP1Q8IV16 184 aa9.92□□□□□ -0.82
SPTBN1-204ENST00000467371 GNEQ9Y223 722 aaKnown RBP9.92□□□□□ -0.82
SPTBN1-204ENST00000467371 WASHC2AQ641Q2 1341 aa9.91□□□□□ -0.82
SPTBN1-204ENST00000467371 NBPF1Q3BBV0 1214 aa9.91□□□□□ -0.82
SPTBN1-204ENST00000467371 BAZ1BQ9UIG0 1483 aaKnown RBP9.91□□□□□ -0.82
SPTBN1-204ENST00000467371 BICRAQ9NZM4 1560 aa9.91□□□□□ -0.82
SPTBN1-204ENST00000467371 SRPK2P78362 688 aaKnown RBP9.9□□□□□ -0.82
SPTBN1-204ENST00000467371 KCNH8Q96L42 1107 aa9.9□□□□□ -0.82
SPTBN1-204ENST00000467371 SH3BP1Q9Y3L3 701 aa9.9□□□□□ -0.82
SPTBN1-204ENST00000467371 JADE2Q9NQC1 790 aa9.9□□□□□ -0.82
SPTBN1-204ENST00000467371 GNL3LQ9NVN8 582 aaKnown RBP9.9□□□□□ -0.82
SPTBN1-204ENST00000467371 HOXD11P31277 338 aaPredicted RBP9.9□□□□□ -0.83
SPTBN1-204ENST00000467371 KCNB2Q92953 911 aa9.9□□□□□ -0.83
SPTBN1-204ENST00000467371 ZNF330Q9Y3S2 320 aaPredicted RBP9.9□□□□□ -0.83
SPTBN1-204ENST00000467371 KIF4AO95239 1232 aa9.89□□□□□ -0.83
SPTBN1-204ENST00000467371 BDNFP23560 247 aa9.89□□□□□ -0.83
SPTBN1-204ENST00000467371 GYS2P54840 703 aa9.89□□□□□ -0.83
SPTBN1-204ENST00000467371 RHBDL3P58872 404 aa9.89□□□□□ -0.83
SPTBN1-204ENST00000467371 PBXIP1Q96AQ6 731 aa9.89□□□□□ -0.83
SPTBN1-204ENST00000467371 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.89□□□□□ -0.83
SPTBN1-204ENST00000467371 SPACA7Q96KW9 195 aa9.89□□□□□ -0.83
SPTBN1-204ENST00000467371 WASHC2CQ9Y4E1 1318 aa9.89□□□□□ -0.83
SPTBN1-204ENST00000467371 VAMP1P23763 118 aa9.89□□□□□ -0.83
SPTBN1-204ENST00000467371 TBC1D2Q9BYX2 928 aa9.89□□□□□ -0.83
SPTBN1-204ENST00000467371 CHPF2Q9P2E5 772 aa9.89□□□□□ -0.83
SPTBN1-204ENST00000467371 EPB41L2O43491 1005 aaKnown RBP9.88□□□□□ -0.83
SPTBN1-204ENST00000467371 TLDC2A0PJX2 215 aa9.88□□□□□ -0.83
SPTBN1-204ENST00000467371 CALRP27797 417 aaKnown RBP9.88□□□□□ -0.83
SPTBN1-204ENST00000467371 TSPAN18Q96SJ8 248 aa9.88□□□□□ -0.83
SPTBN1-204ENST00000467371 CLIP1P30622 1438 aa9.87□□□□□ -0.83
SPTBN1-204ENST00000467371 PARP9Q8IXQ6 854 aa9.87□□□□□ -0.83
SPTBN1-204ENST00000467371 PLCD3Q8N3E9 789 aa9.87□□□□□ -0.83
SPTBN1-204ENST00000467371 C11orf96Q7Z7L8 435 aa9.87□□□□□ -0.83
SPTBN1-204ENST00000467371 STAC3Q96MF2 364 aa9.87□□□□□ -0.83
SPTBN1-204ENST00000467371 PTPROQ16827 1216 aa9.87□□□□□ -0.83
SPTBN1-204ENST00000467371 WDR78Q5VTH9 848 aa9.87□□□□□ -0.83
SPTBN1-204ENST00000467371 COMMD10Q9Y6G5 202 aa9.87□□□□□ -0.83
SPTBN1-204ENST00000467371 TNIKQ9UKE5 1360 aa9.86□□□□□ -0.83
SPTBN1-204ENST00000467371 SENP7Q9BQF6 1050 aa9.86□□□□□ -0.83
SPTBN1-204ENST00000467371 PAK3O75914 559 aaPredicted RBP9.86□□□□□ -0.83
SPTBN1-204ENST00000467371 DMRT2Q9Y5R5 561 aa9.86□□□□□ -0.83
SPTBN1-204ENST00000467371 CASC1Q6TDU7 716 aa9.85□□□□□ -0.83
SPTBN1-204ENST00000467371 ARHGEF10LQ9HCE6 1279 aa9.85□□□□□ -0.83
SPTBN1-204ENST00000467371 GABBR1Q9UBS5 961 aa9.85□□□□□ -0.83
SPTBN1-204ENST00000467371 NPAS4Q8IUM7 802 aa9.85□□□□□ -0.83
SPTBN1-204ENST00000467371 CCDC85AQ96PX6 553 aaPredicted RBP9.85□□□□□ -0.83
SPTBN1-204ENST00000467371 IGF1RP08069 1367 aa9.85□□□□□ -0.83
SPTBN1-204ENST00000467371 IGBP1P78318 339 aa9.85□□□□□ -0.83
SPTBN1-204ENST00000467371 NBPF20Q3BBV1 942 aa9.85□□□□□ -0.83
SPTBN1-204ENST00000467371 CXorf38Q8TB03 319 aa9.85□□□□□ -0.83
SPTBN1-204ENST00000467371 PNISRQ8TF01 805 aaKnown RBP9.85□□□□□ -0.83
SPTBN1-204ENST00000467371 MKL1Q969V6 931 aa9.85□□□□□ -0.83
SPTBN1-204ENST00000467371 PDAP1Q13442 181 aaKnown RBP9.84□□□□□ -0.83
SPTBN1-204ENST00000467371 KANK4Q5T7N3 995 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms