RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 ZFYVE9O95405 1425 aa29.28■■■□□ 2.28
GMDS-203ENST00000467288 LRRC7Q96NW7 1537 aa29.25■■■□□ 2.27
GMDS-203ENST00000467288 RIMS2Q9UQ26 1411 aa29.25■■■□□ 2.27
GMDS-203ENST00000467288 CHGAP10645 457 aaKnown RBP29.24■■■□□ 2.27
GMDS-203ENST00000467288 SPHKAPQ2M3C7 1700 aa29.24■■■□□ 2.27
GMDS-203ENST00000467288 HDGFP51858 240 aaKnown RBP29.23■■■□□ 2.27
GMDS-203ENST00000467288 TRIM52Q96A61 297 aa29.21■■■□□ 2.27
GMDS-203ENST00000467288 SENP3Q9H4L4 574 aaPredicted RBP29.21■■■□□ 2.27
GMDS-203ENST00000467288 ALKQ9UM73 1620 aa29.2■■■□□ 2.27
GMDS-203ENST00000467288 PLEKHG1Q9ULL1 1385 aa29.19■■■□□ 2.26
GMDS-203ENST00000467288 SLC26A8Q96RN1 970 aa29.19■■■□□ 2.26
GMDS-203ENST00000467288 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.18■■■□□ 2.26
GMDS-203ENST00000467288 PPP1R15AO75807 674 aaPredicted RBP29.16■■■□□ 2.26
GMDS-203ENST00000467288 TRPM2O94759 1503 aa29.15■■■□□ 2.26
GMDS-203ENST00000467288 KCNA6P17658 529 aa29.14■■■□□ 2.26
GMDS-203ENST00000467288 BCANQ96GW7 911 aa29.13■■■□□ 2.25
GMDS-203ENST00000467288 SLC4A1APQ9BWU0 796 aaKnown RBP29.13■■■□□ 2.25
GMDS-203ENST00000467288 CLTCL1P53675 1640 aa29.12■■■□□ 2.25
GMDS-203ENST00000467288 MED1Q15648 1581 aaPredicted RBP29.1■■■□□ 2.25
GMDS-203ENST00000467288 NUTM2DQ5VT03 806 aaPredicted RBP29.09■■■□□ 2.25
GMDS-203ENST00000467288 TBX22Q9Y458 520 aa29.08■■■□□ 2.25
GMDS-203ENST00000467288 NWD1Q149M9 1564 aa29.08■■■□□ 2.25
GMDS-203ENST00000467288 ADAMTS13Q76LX8 1427 aa29.06■■■□□ 2.24
GMDS-203ENST00000467288 PHF23Q9BUL5 403 aaPredicted RBP29.06■■■□□ 2.24
GMDS-203ENST00000467288 XIRP1Q702N8 1843 aaKnown RBP29.05■■■□□ 2.24
GMDS-203ENST00000467288 NKTRP30414 1462 aaKnown RBP29.04■■■□□ 2.24
GMDS-203ENST00000467288 SETD5Q9C0A6 1442 aa29.03■■■□□ 2.24
GMDS-203ENST00000467288 ACIN1Q9UKV3 1341 aaKnown RBP29.02■■■□□ 2.24
GMDS-203ENST00000467288 DIP2AQ14689 1571 aa29.02■■■□□ 2.24
GMDS-203ENST00000467288 ZNF326Q5BKZ1 582 aaKnown RBP29.02■■■□□ 2.24
GMDS-203ENST00000467288 TMEM94Q12767 1356 aa29.01■■■□□ 2.24
GMDS-203ENST00000467288 PROSER2Q86WR7 435 aaPredicted RBP29.01■■■□□ 2.23
GMDS-203ENST00000467288 RBM33Q96EV2 1170 aaKnown RBP29.01■■■□□ 2.23
GMDS-203ENST00000467288 CHD2O14647 1828 aaKnown RBP29.01■■■□□ 2.23
GMDS-203ENST00000467288 KIF1BO60333 1816 aa29.01■■■□□ 2.23
GMDS-203ENST00000467288 MPHOSPH9Q99550 1183 aa29■■■□□ 2.23
GMDS-203ENST00000467288 NEXMIFQ5QGS0 1516 aa28.98■■■□□ 2.23
GMDS-203ENST00000467288 PIK3R4Q99570 1358 aa28.98■■■□□ 2.23
GMDS-203ENST00000467288 FOXD1Q16676 465 aa28.97■■■□□ 2.23
GMDS-203ENST00000467288 SETBP1Q9Y6X0 1596 aa28.96■■■□□ 2.23
GMDS-203ENST00000467288 NRXN3Q9Y4C0 1643 aa28.94■■■□□ 2.22
GMDS-203ENST00000467288 FAM135BQ49AJ0 1406 aa28.94■■■□□ 2.22
GMDS-203ENST00000467288 RAB3GAP2Q9H2M9 1393 aa28.92■■■□□ 2.22
GMDS-203ENST00000467288 RPGRIP1LQ68CZ1 1315 aa28.89■■■□□ 2.21
GMDS-203ENST00000467288 PTPRUQ92729 1446 aa28.88■■■□□ 2.21
GMDS-203ENST00000467288 CCDC144AA2RUR9 1427 aa28.87■■■□□ 2.21
GMDS-203ENST00000467288 NCOA3Q9Y6Q9 1424 aa28.86■■■□□ 2.21
GMDS-203ENST00000467288 RGS17Q9UGC6 210 aaPredicted RBP28.86■■■□□ 2.21
GMDS-203ENST00000467288 AMOTL2Q9Y2J4 779 aa28.86■■■□□ 2.21
GMDS-203ENST00000467288 VGFO15240 615 aaPredicted RBP28.85■■■□□ 2.21
GMDS-203ENST00000467288 MSH6P52701 1360 aa28.85■■■□□ 2.21
GMDS-203ENST00000467288 METP08581 1390 aa28.83■■■□□ 2.21
GMDS-203ENST00000467288 SLAIN2Q9P270 581 aa28.82■■■□□ 2.2
GMDS-203ENST00000467288 XRN1Q8IZH2 1706 aaKnown RBP28.81■■■□□ 2.2
GMDS-203ENST00000467288 SPATA31E1Q6ZUB1 1445 aa28.81■■■□□ 2.2
GMDS-203ENST00000467288 PPLO60437 1756 aa28.8■■■□□ 2.2
GMDS-203ENST00000467288 HRCP23327 699 aa28.8■■■□□ 2.2
GMDS-203ENST00000467288 RGL3Q3MIN7 710 aa28.74■■■□□ 2.19
GMDS-203ENST00000467288 C19orf44Q9H6X5 657 aa28.74■■■□□ 2.19
GMDS-203ENST00000467288 SETD1AO15047 1707 aaKnown RBP28.74■■■□□ 2.19
GMDS-203ENST00000467288 C14orf37Q86TY3 774 aa28.73■■■□□ 2.19
GMDS-203ENST00000467288 ANKRD30BQ9BXX2 1392 aa28.71■■■□□ 2.19
GMDS-203ENST00000467288 ROBO1Q9Y6N7 1651 aa28.7■■■□□ 2.19
GMDS-203ENST00000467288 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.7■■■□□ 2.19
GMDS-203ENST00000467288 IFT172Q9UG01 1749 aa28.7■■■□□ 2.19
GMDS-203ENST00000467288 ADGRF5Q8IZF2 1346 aa28.69■■■□□ 2.18
GMDS-203ENST00000467288 POTEAQ6S8J7 498 aa28.69■■■□□ 2.18
GMDS-203ENST00000467288 CADPS2Q86UW7 1296 aa28.69■■■□□ 2.18
GMDS-203ENST00000467288 PRAG1Q86YV5 1406 aa28.66■■■□□ 2.18
GMDS-203ENST00000467288 ATF3P18847 181 aa28.65■■■□□ 2.18
GMDS-203ENST00000467288 DCCP43146 1447 aa28.65■■■□□ 2.18
GMDS-203ENST00000467288 PTCH1Q13635 1447 aa28.63■■■□□ 2.17
GMDS-203ENST00000467288 JCADQ9P266 1359 aa28.61■■■□□ 2.17
GMDS-203ENST00000467288 ADGRL3Q9HAR2 1447 aa28.6■■■□□ 2.17
GMDS-203ENST00000467288 ROBO2Q9HCK4 1378 aa28.6■■■□□ 2.17
GMDS-203ENST00000467288 PIK3C2GO75747 1445 aa28.6■■■□□ 2.17
GMDS-203ENST00000467288 MYOM2P54296 1465 aa28.56■■■□□ 2.16
GMDS-203ENST00000467288 NALCNQ8IZF0 1738 aa28.55■■■□□ 2.16
GMDS-203ENST00000467288 NRXN1Q9ULB1 1477 aa28.55■■■□□ 2.16
GMDS-203ENST00000467288 MST1RQ04912 1400 aa28.54■■■□□ 2.16
GMDS-203ENST00000467288 ASXL1Q8IXJ9 1541 aa28.53■■■□□ 2.16
GMDS-203ENST00000467288 PHLPP1O60346 1717 aa28.52■■■□□ 2.16
GMDS-203ENST00000467288 LRPPRCP42704 1394 aaKnown RBP28.51■■■□□ 2.16
GMDS-203ENST00000467288 BRINP3Q76B58 766 aa28.51■■■□□ 2.15
GMDS-203ENST00000467288 TECPR2O15040 1411 aa28.51■■■□□ 2.15
GMDS-203ENST00000467288 C14orf93Q9H972 538 aaKnown RBP28.5■■■□□ 2.15
GMDS-203ENST00000467288 AHDC1Q5TGY3 1603 aaPredicted RBP28.49■■■□□ 2.15
GMDS-203ENST00000467288 ABCC11Q96J66 1382 aa28.49■■■□□ 2.15
GMDS-203ENST00000467288 COL16A1Q07092 1604 aaPredicted RBP28.48■■■□□ 2.15
GMDS-203ENST00000467288 TMEM132EQ6IEE7 984 aa28.48■■■□□ 2.15
GMDS-203ENST00000467288 SPATA31A6Q5VVP1 1343 aa28.47■■■□□ 2.15
GMDS-203ENST00000467288 STK26Q9P289 416 aa28.46■■■□□ 2.15
GMDS-203ENST00000467288 LAMC1P11047 1609 aa28.45■■■□□ 2.14
GMDS-203ENST00000467288 CFAP70Q5T0N1 1121 aa28.45■■■□□ 2.14
GMDS-203ENST00000467288 KNDC1Q76NI1 1749 aa28.45■■■□□ 2.14
GMDS-203ENST00000467288 YTHDC2Q9H6S0 1430 aaKnown RBP28.44■■■□□ 2.14
GMDS-203ENST00000467288 MEX3CQ5U5Q3 659 aaKnown RBP28.44■■■□□ 2.14
GMDS-203ENST00000467288 C1orf167Q5SNV9 1468 aa28.41■■■□□ 2.14
GMDS-203ENST00000467288 STAC3Q96MF2 364 aa28.41■■■□□ 2.14
GMDS-203ENST00000467288 WAPLQ7Z5K2 1190 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms