RNA–Protein interactions for RNA: ENST00000467081.1

CCNL1-209, Transcript of cyclin L1, humanhuman

TSL 3

Gene CCNL1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-209ENST00000467081 NLRP7Q8WX94 980 aa13.39□□□□□ -0.27
CCNL1-209ENST00000467081 TMEM134Q9H6X4 195 aa13.38□□□□□ -0.27
CCNL1-209ENST00000467081 HCSTQ9UBK5 93 aa13.38□□□□□ -0.27
CCNL1-209ENST00000467081 HPS5Q9UPZ3 1129 aa13.37□□□□□ -0.27
CCNL1-209ENST00000467081 TSR3Q9UJK0 312 aaKnown RBP13.35□□□□□ -0.27
CCNL1-209ENST00000467081 WBP1LQ9NX94 342 aa13.34□□□□□ -0.27
CCNL1-209ENST00000467081 SLC4A3P48751 1232 aa13.33□□□□□ -0.28
CCNL1-209ENST00000467081 SLF2Q8IX21 1173 aa13.33□□□□□ -0.28
CCNL1-209ENST00000467081 PPP4CP60510 307 aa13.32□□□□□ -0.28
CCNL1-209ENST00000467081 SLC24A3Q9HC58 644 aa13.32□□□□□ -0.28
CCNL1-209ENST00000467081 MDM2Q00987 491 aaPredicted RBP13.28□□□□□ -0.28
CCNL1-209ENST00000467081 AK7Q96M32 723 aa13.28□□□□□ -0.28
CCNL1-209ENST00000467081 DAXXQ9UER7 740 aaPredicted RBP13.28□□□□□ -0.28
CCNL1-209ENST00000467081 TPRNQ4KMQ1 711 aa13.26□□□□□ -0.29
CCNL1-209ENST00000467081 DDX11L8A8MPP1 907 aa13.24□□□□□ -0.29
CCNL1-209ENST00000467081 TRIM66O15016 1216 aa13.24□□□□□ -0.29
CCNL1-209ENST00000467081 NECTIN2Q92692 538 aa13.24□□□□□ -0.29
CCNL1-209ENST00000467081 SLC10A3P09131 477 aa13.23□□□□□ -0.29
CCNL1-209ENST00000467081 NYAP1Q6ZVC0 841 aa13.23□□□□□ -0.29
CCNL1-209ENST00000467081 CLCN1P35523 988 aa13.22□□□□□ -0.29
CCNL1-209ENST00000467081 RDH13Q8NBN7 331 aa13.22□□□□□ -0.29
CCNL1-209ENST00000467081 APLP1P51693 650 aa13.21□□□□□ -0.29
CCNL1-209ENST00000467081 TTLL12Q14166 644 aaPredicted RBP13.21□□□□□ -0.29
CCNL1-209ENST00000467081 RSPH4AQ5TD94 716 aa13.21□□□□□ -0.29
CCNL1-209ENST00000467081 GPCPD1Q9NPB8 672 aa13.21□□□□□ -0.29
CCNL1-209ENST00000467081 AMHR2Q16671 573 aa13.2□□□□□ -0.3
CCNL1-209ENST00000467081 SULF1Q8IWU6 871 aa13.2□□□□□ -0.3
CCNL1-209ENST00000467081 CFHP08603 1231 aa13.19□□□□□ -0.3
CCNL1-209ENST00000467081 REPIN1Q9BWE0 567 aaKnown RBP13.19□□□□□ -0.3
CCNL1-209ENST00000467081 TMUB1Q9BVT8 246 aa13.18□□□□□ -0.3
CCNL1-209ENST00000467081 PDE4DQ08499 809 aa13.15□□□□□ -0.3
CCNL1-209ENST00000467081 KMT5BQ4FZB7 885 aa13.15□□□□□ -0.3
CCNL1-209ENST00000467081 PARP9Q8IXQ6 854 aa13.14□□□□□ -0.31
CCNL1-209ENST00000467081 PRR14Q9BWN1 585 aa13.14□□□□□ -0.31
CCNL1-209ENST00000467081 FAM217BQ9NTX9 383 aaPredicted RBP13.14□□□□□ -0.31
CCNL1-209ENST00000467081 GIGYF2Q6Y7W6 1299 aaKnown RBP13.13□□□□□ -0.31
CCNL1-209ENST00000467081 CD46P15529 392 aa13.12□□□□□ -0.31
CCNL1-209ENST00000467081 ACTN4O43707 911 aaKnown RBP13.11□□□□□ -0.31
CCNL1-209ENST00000467081 PRKCSHP14314 528 aaPredicted RBP13.11□□□□□ -0.31
CCNL1-209ENST00000467081 SSTR3P32745 418 aaPredicted RBP13.11□□□□□ -0.31
CCNL1-209ENST00000467081 PLA2G2EQ9NZK7 142 aa13.11□□□□□ -0.31
CCNL1-209ENST00000467081 GCGRP47871 477 aa13.1□□□□□ -0.31
CCNL1-209ENST00000467081 MTRQ99707 1265 aa13.09□□□□□ -0.31
CCNL1-209ENST00000467081 PCDHB3Q9Y5E6 796 aa13.09□□□□□ -0.31
CCNL1-209ENST00000467081 COPS2P61201 443 aa13.08□□□□□ -0.32
CCNL1-209ENST00000467081 ITGBL1O95965 494 aaPredicted RBP13.06□□□□□ -0.32
CCNL1-209ENST00000467081 TJAP1Q5JTD0 557 aa13.06□□□□□ -0.32
CCNL1-209ENST00000467081 BLOC1S3Q6QNY0 202 aa13.06□□□□□ -0.32
CCNL1-209ENST00000467081 FUT2Q10981 343 aa13.05□□□□□ -0.32
CCNL1-209ENST00000467081 MS4A1P11836 297 aa13.04□□□□□ -0.32
CCNL1-209ENST00000467081 KCNC4Q03721 635 aa13.04□□□□□ -0.32
CCNL1-209ENST00000467081 PUS10Q3MIT2 529 aaKnown RBP13.04□□□□□ -0.32
CCNL1-209ENST00000467081 IL21Q9HBE4 155 aa13.04□□□□□ -0.32
CCNL1-209ENST00000467081 KDM4AO75164 1064 aa13.02□□□□□ -0.33
CCNL1-209ENST00000467081 ZNF516Q92618 1163 aa13.02□□□□□ -0.33
CCNL1-209ENST00000467081 BEGAINQ9BUH8 593 aa13.01□□□□□ -0.33
CCNL1-209ENST00000467081 GPBP1L1Q9HC44 474 aaPredicted RBP13.01□□□□□ -0.33
CCNL1-209ENST00000467081 ATP6V1AP38606 617 aa13□□□□□ -0.33
CCNL1-209ENST00000467081 NUTM1Q86Y26 1132 aa13□□□□□ -0.33
CCNL1-209ENST00000467081 ZPR1O75312 459 aa12.97□□□□□ -0.33
CCNL1-209ENST00000467081 NR1I2O75469 434 aa12.97□□□□□ -0.33
CCNL1-209ENST00000467081 GRIPAP1Q4V328 841 aa12.97□□□□□ -0.33
CCNL1-209ENST00000467081 MORN1Q5T089 497 aa12.97□□□□□ -0.33
CCNL1-209ENST00000467081 KDM4CQ9H3R0 1056 aa12.97□□□□□ -0.33
CCNL1-209ENST00000467081 USP46P62068 366 aa12.96□□□□□ -0.33
CCNL1-209ENST00000467081 IFFO2Q5TF58 517 aa12.96□□□□□ -0.33
CCNL1-209ENST00000467081 SCUBE3Q8IX30 993 aa12.96□□□□□ -0.33
CCNL1-209ENST00000467081 NEUROD2Q15784 382 aa12.95□□□□□ -0.34
CCNL1-209ENST00000467081 SPIRE2Q8WWL2 714 aa12.95□□□□□ -0.34
CCNL1-209ENST00000467081 HOXA2O43364 376 aa12.94□□□□□ -0.34
CCNL1-209ENST00000467081 NKX2-3Q8TAU0 364 aa12.94□□□□□ -0.34
CCNL1-209ENST00000467081 HLA-CQ95604 372 aa12.94□□□□□ -0.34
CCNL1-209ENST00000467081 SLC27A5Q9Y2P5 690 aa12.94□□□□□ -0.34
CCNL1-209ENST00000467081 TLL1O43897 1013 aa12.93□□□□□ -0.34
CCNL1-209ENST00000467081 GUCA2AQ02747 115 aa12.91□□□□□ -0.34
CCNL1-209ENST00000467081 TBC1D2Q9BYX2 928 aa12.91□□□□□ -0.34
CCNL1-209ENST00000467081 BRPF1P55201 1214 aaPredicted RBP12.9□□□□□ -0.34
CCNL1-209ENST00000467081 MOXD2PA6NHM9 499 aa12.88□□□□□ -0.35
CCNL1-209ENST00000467081 NDUFV2P19404 249 aa12.88□□□□□ -0.35
CCNL1-209ENST00000467081 FAM117AQ9C073 453 aa12.88□□□□□ -0.35
CCNL1-209ENST00000467081 A0A0G2JS52 829 aa12.87□□□□□ -0.35
CCNL1-209ENST00000467081 DIXDC1Q155Q3 683 aa12.87□□□□□ -0.35
CCNL1-209ENST00000467081 SPSB2Q99619 263 aa12.87□□□□□ -0.35
CCNL1-209ENST00000467081 FMNL1O95466 1100 aaPredicted RBP12.86□□□□□ -0.35
CCNL1-209ENST00000467081 ADH1BP00325 375 aa12.86□□□□□ -0.35
CCNL1-209ENST00000467081 FDX1P10109 184 aa12.85□□□□□ -0.35
CCNL1-209ENST00000467081 RNF19BQ6ZMZ0 732 aa12.85□□□□□ -0.35
CCNL1-209ENST00000467081 THAP11Q96EK4 314 aa12.85□□□□□ -0.35
CCNL1-209ENST00000467081 Q3C1V9 767 aa12.84□□□□□ -0.35
CCNL1-209ENST00000467081 DDRGK1Q96HY6 314 aa12.84□□□□□ -0.35
CCNL1-209ENST00000467081 PPP1R18Q6NYC8 613 aa12.83□□□□□ -0.36
CCNL1-209ENST00000467081 BRICD5Q6PL45 260 aa12.83□□□□□ -0.36
CCNL1-209ENST00000467081 SALL2Q9Y467 1007 aaPredicted RBP12.83□□□□□ -0.36
CCNL1-209ENST00000467081 MYSM1Q5VVJ2 828 aa12.82□□□□□ -0.36
CCNL1-209ENST00000467081 PCDHGC3Q9UN70 934 aa12.82□□□□□ -0.36
CCNL1-209ENST00000467081 RSBN1LQ6PCB5 846 aaPredicted RBP12.81□□□□□ -0.36
CCNL1-209ENST00000467081 RIC3Q7Z5B4 369 aa12.81□□□□□ -0.36
CCNL1-209ENST00000467081 SYMPKQ92797 1274 aaKnown RBP12.81□□□□□ -0.36
CCNL1-209ENST00000467081 PLEKHG3A1L390 1219 aa12.8□□□□□ -0.36
CCNL1-209ENST00000467081 S1PR4O95977 384 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms