RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 E9PCH4 1651 aa23.62■■□□□ 1.37
SNAPC3-205ENST00000467062 ZMYND15Q9H091 742 aa23.61■■□□□ 1.37
SNAPC3-205ENST00000467062 WDR7Q9Y4E6 1490 aa23.6■■□□□ 1.37
SNAPC3-205ENST00000467062 CFAP70Q5T0N1 1121 aa23.6■■□□□ 1.37
SNAPC3-205ENST00000467062 VSIG10Q8N0Z9 540 aa23.59■■□□□ 1.37
SNAPC3-205ENST00000467062 ZFYVE16Q7Z3T8 1539 aa23.59■■□□□ 1.37
SNAPC3-205ENST00000467062 RCAN3Q9UKA8 241 aa23.58■■□□□ 1.37
SNAPC3-205ENST00000467062 KNSTRNQ9Y448 316 aa23.58■■□□□ 1.37
SNAPC3-205ENST00000467062 EXOC6Q8TAG9 804 aa23.57■■□□□ 1.36
SNAPC3-205ENST00000467062 ADAMTS8Q9UP79 889 aa23.57■■□□□ 1.36
SNAPC3-205ENST00000467062 CHGAP10645 457 aaKnown RBP23.57■■□□□ 1.36
SNAPC3-205ENST00000467062 RTEL1-TNFRSF6BF6WH68 1400 aa23.56■■□□□ 1.36
SNAPC3-205ENST00000467062 PLIN1O60240 522 aa23.56■■□□□ 1.36
SNAPC3-205ENST00000467062 RRP1P56182 461 aaKnown RBP23.55■■□□□ 1.36
SNAPC3-205ENST00000467062 ADGRL1O94910 1474 aa23.55■■□□□ 1.36
SNAPC3-205ENST00000467062 ADGRF5Q8IZF2 1346 aa23.55■■□□□ 1.36
SNAPC3-205ENST00000467062 KANK1Q14678 1352 aa23.54■■□□□ 1.36
SNAPC3-205ENST00000467062 UGGT1Q9NYU2 1555 aa23.54■■□□□ 1.36
SNAPC3-205ENST00000467062 ASXL2Q76L83 1435 aa23.53■■□□□ 1.36
SNAPC3-205ENST00000467062 DAXXQ9UER7 740 aaPredicted RBP23.52■■□□□ 1.36
SNAPC3-205ENST00000467062 GGT6Q6P531 493 aa23.51■■□□□ 1.35
SNAPC3-205ENST00000467062 SENP3Q9H4L4 574 aaPredicted RBP23.51■■□□□ 1.35
SNAPC3-205ENST00000467062 EIF2AK4Q9P2K8 1649 aaKnown RBP23.51■■□□□ 1.35
SNAPC3-205ENST00000467062 PTPRTO14522 1441 aa23.51■■□□□ 1.35
SNAPC3-205ENST00000467062 PPP2R1AP30153 589 aa23.51■■□□□ 1.35
SNAPC3-205ENST00000467062 ATP7AQ04656 1500 aa23.51■■□□□ 1.35
SNAPC3-205ENST00000467062 AMER1Q5JTC6 1135 aaPredicted RBP23.5■■□□□ 1.35
SNAPC3-205ENST00000467062 CLTCL1P53675 1640 aa23.49■■□□□ 1.35
SNAPC3-205ENST00000467062 TRPM2O94759 1503 aa23.48■■□□□ 1.35
SNAPC3-205ENST00000467062 MADDQ8WXG6 1647 aa23.47■■□□□ 1.35
SNAPC3-205ENST00000467062 NPM1P06748 294 aaKnown RBP eCLIP23.47■■□□□ 1.35
SNAPC3-205ENST00000467062 SCAF11Q99590 1463 aaKnown RBP23.45■■□□□ 1.35
SNAPC3-205ENST00000467062 LAMC1P11047 1609 aa23.45■■□□□ 1.35
SNAPC3-205ENST00000467062 NUTM2DQ5VT03 806 aaPredicted RBP23.45■■□□□ 1.34
SNAPC3-205ENST00000467062 PODXL2Q9NZ53 605 aa23.45■■□□□ 1.34
SNAPC3-205ENST00000467062 PDE3BQ13370 1112 aa23.44■■□□□ 1.34
SNAPC3-205ENST00000467062 WDR43Q15061 677 aaKnown RBP eCLIP23.44■■□□□ 1.34
SNAPC3-205ENST00000467062 CCDC146Q8IYE0 955 aa23.44■■□□□ 1.34
SNAPC3-205ENST00000467062 RRP9O43818 475 aaKnown RBP23.43■■□□□ 1.34
SNAPC3-205ENST00000467062 HSP90AA2PQ14568 343 aaPredicted RBP23.42■■□□□ 1.34
SNAPC3-205ENST00000467062 CDCA8Q53HL2 280 aa23.42■■□□□ 1.34
SNAPC3-205ENST00000467062 RNF17Q9BXT8 1623 aaKnown RBP23.41■■□□□ 1.34
SNAPC3-205ENST00000467062 ARAP3Q8WWN8 1544 aa23.41■■□□□ 1.34
SNAPC3-205ENST00000467062 SKAP1Q86WV1 359 aa23.41■■□□□ 1.34
SNAPC3-205ENST00000467062 TRAK1Q9UPV9 953 aa23.41■■□□□ 1.34
SNAPC3-205ENST00000467062 SPHKAPQ2M3C7 1700 aa23.4■■□□□ 1.34
SNAPC3-205ENST00000467062 TMEM132EQ6IEE7 984 aa23.4■■□□□ 1.34
SNAPC3-205ENST00000467062 RAPGEF3O95398 923 aa23.4■■□□□ 1.34
SNAPC3-205ENST00000467062 ABCA9Q8IUA7 1624 aa23.4■■□□□ 1.34
SNAPC3-205ENST00000467062 OSCARQ8IYS5 282 aa23.39■■□□□ 1.34
SNAPC3-205ENST00000467062 CARD14Q9BXL6 1004 aa23.39■■□□□ 1.33
SNAPC3-205ENST00000467062 INO80Q9ULG1 1556 aaPredicted RBP23.38■■□□□ 1.33
SNAPC3-205ENST00000467062 C20orf194Q5TEA3 1177 aa23.38■■□□□ 1.33
SNAPC3-205ENST00000467062 BLMP54132 1417 aaPredicted RBP23.37■■□□□ 1.33
SNAPC3-205ENST00000467062 STAC3Q96MF2 364 aa23.37■■□□□ 1.33
SNAPC3-205ENST00000467062 PLEKHH1Q9ULM0 1364 aa23.37■■□□□ 1.33
SNAPC3-205ENST00000467062 DEPDC5O75140 1603 aa23.36■■□□□ 1.33
SNAPC3-205ENST00000467062 TET3O43151 1660 aa23.36■■□□□ 1.33
SNAPC3-205ENST00000467062 TNNT2P45379 298 aaPredicted RBP23.36■■□□□ 1.33
SNAPC3-205ENST00000467062 RRAGDQ9NQL2 400 aaPredicted RBP23.36■■□□□ 1.33
SNAPC3-205ENST00000467062 FRAT2O75474 233 aaPredicted RBP23.35■■□□□ 1.33
SNAPC3-205ENST00000467062 HSP90AA1P07900 732 aaKnown RBP23.35■■□□□ 1.33
SNAPC3-205ENST00000467062 CRBNQ96SW2 442 aa23.35■■□□□ 1.33
SNAPC3-205ENST00000467062 EIF3AQ14152 1382 aaKnown RBP23.34■■□□□ 1.33
SNAPC3-205ENST00000467062 CEP152O94986 1710 aa23.34■■□□□ 1.33
SNAPC3-205ENST00000467062 IQGAP1P46940 1657 aa23.33■■□□□ 1.33
SNAPC3-205ENST00000467062 VWDEQ8N2E2 1590 aa23.33■■□□□ 1.33
SNAPC3-205ENST00000467062 CD109Q6YHK3 1445 aa23.33■■□□□ 1.33
SNAPC3-205ENST00000467062 MROH1Q8NDA8 1641 aa23.33■■□□□ 1.33
SNAPC3-205ENST00000467062 SLC4A3P48751 1232 aa23.33■■□□□ 1.32
SNAPC3-205ENST00000467062 NOS1P29475 1434 aa23.33■■□□□ 1.32
SNAPC3-205ENST00000467062 CFAP65Q6ZU64 1925 aaKnown RBP23.32■■□□□ 1.32
SNAPC3-205ENST00000467062 L1TD1Q5T7N2 865 aaKnown RBP23.32■■□□□ 1.32
SNAPC3-205ENST00000467062 APAF1O14727 1248 aa23.31■■□□□ 1.32
SNAPC3-205ENST00000467062 NAP1L5Q96NT1 182 aaPredicted RBP23.31■■□□□ 1.32
SNAPC3-205ENST00000467062 SLC12A5Q9H2X9 1139 aa23.3■■□□□ 1.32
SNAPC3-205ENST00000467062 SPINK5Q9NQ38 1064 aaPredicted RBP23.3■■□□□ 1.32
SNAPC3-205ENST00000467062 DUSP27Q5VZP5 1158 aa23.29■■□□□ 1.32
SNAPC3-205ENST00000467062 KIDINS220Q9ULH0 1771 aa23.29■■□□□ 1.32
SNAPC3-205ENST00000467062 ZNF518AQ6AHZ1 1483 aa23.28■■□□□ 1.32
SNAPC3-205ENST00000467062 ASXL1Q8IXJ9 1541 aa23.28■■□□□ 1.32
SNAPC3-205ENST00000467062 ERVK-7P63135 1459 aa23.28■■□□□ 1.32
SNAPC3-205ENST00000467062 PNNQ9H307 717 aaKnown RBP23.27■■□□□ 1.32
SNAPC3-205ENST00000467062 NPATQ14207 1427 aa23.26■■□□□ 1.31
SNAPC3-205ENST00000467062 PLEKHG5O94827 1062 aa23.26■■□□□ 1.31
SNAPC3-205ENST00000467062 SAFB2Q14151 953 aaKnown RBP eCLIP23.26■■□□□ 1.31
SNAPC3-205ENST00000467062 GOLGA2Q08379 1002 aa23.26■■□□□ 1.31
SNAPC3-205ENST00000467062 CENPJQ9HC77 1338 aaPredicted RBP23.25■■□□□ 1.31
SNAPC3-205ENST00000467062 EFCAB6Q5THR3 1501 aa23.25■■□□□ 1.31
SNAPC3-205ENST00000467062 PPRC1Q5VV67 1664 aaKnown RBP23.25■■□□□ 1.31
SNAPC3-205ENST00000467062 DMRT2Q9Y5R5 561 aa23.24■■□□□ 1.31
SNAPC3-205ENST00000467062 ABCA6Q8N139 1617 aa23.24■■□□□ 1.31
SNAPC3-205ENST00000467062 ZMYM4Q5VZL5 1548 aa23.23■■□□□ 1.31
SNAPC3-205ENST00000467062 MAP3K4Q9Y6R4 1608 aa23.23■■□□□ 1.31
SNAPC3-205ENST00000467062 SYNMO15061 1565 aa23.23■■□□□ 1.31
SNAPC3-205ENST00000467062 ZNF521Q96K83 1311 aa23.21■■□□□ 1.31
SNAPC3-205ENST00000467062 NEUROD2Q15784 382 aa23.21■■□□□ 1.31
SNAPC3-205ENST00000467062 C14orf93Q9H972 538 aaKnown RBP23.2■■□□□ 1.3
SNAPC3-205ENST00000467062 MROH2AA6NES4 1674 aa23.2■■□□□ 1.3
SNAPC3-205ENST00000467062 CLCN1P35523 988 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms