RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 SPDYE1Q8NFV5 336 aaPredicted RBP13.02□□□□□ -0.33
UBA3-208ENST00000465627 ZNF692Q9BU19 519 aaPredicted RBP13.02□□□□□ -0.33
UBA3-208ENST00000465627 DIP2CQ9Y2E4 1556 aa13.02□□□□□ -0.33
UBA3-208ENST00000465627 ZEB1P37275 1124 aaPredicted RBP13.01□□□□□ -0.33
UBA3-208ENST00000465627 ZNF142P52746 1687 aaPredicted RBP13.01□□□□□ -0.33
UBA3-208ENST00000465627 IQGAP3Q86VI3 1631 aa13□□□□□ -0.33
UBA3-208ENST00000465627 MROH1Q8NDA8 1641 aa13□□□□□ -0.33
UBA3-208ENST00000465627 DHX29Q7Z478 1369 aaKnown RBP13□□□□□ -0.33
UBA3-208ENST00000465627 VWDEQ8N2E2 1590 aa12.99□□□□□ -0.33
UBA3-208ENST00000465627 SSUH2Q9Y2M2 353 aa12.99□□□□□ -0.33
UBA3-208ENST00000465627 MYO3AQ8NEV4 1616 aa12.99□□□□□ -0.33
UBA3-208ENST00000465627 RNF17Q9BXT8 1623 aaKnown RBP12.99□□□□□ -0.33
UBA3-208ENST00000465627 MPHOSPH9Q99550 1183 aa12.98□□□□□ -0.33
UBA3-208ENST00000465627 CLEC11AQ9Y240 323 aa12.98□□□□□ -0.33
UBA3-208ENST00000465627 LRRC7Q96NW7 1537 aa12.98□□□□□ -0.33
UBA3-208ENST00000465627 STRCP1A6NGW2 1772 aa12.98□□□□□ -0.33
UBA3-208ENST00000465627 REREQ9P2R6 1566 aa12.97□□□□□ -0.33
UBA3-208ENST00000465627 A2MP01023 1474 aa12.97□□□□□ -0.33
UBA3-208ENST00000465627 PRDM15P57071 1507 aaPredicted RBP12.96□□□□□ -0.33
UBA3-208ENST00000465627 FAM135AQ9P2D6 1515 aa12.96□□□□□ -0.33
UBA3-208ENST00000465627 NEURL4Q96JN8 1562 aa12.96□□□□□ -0.34
UBA3-208ENST00000465627 CEP170BQ9Y4F5 1589 aaPredicted RBP12.96□□□□□ -0.34
UBA3-208ENST00000465627 RBM33Q96EV2 1170 aaKnown RBP12.95□□□□□ -0.34
UBA3-208ENST00000465627 POLR1AO95602 1720 aaPredicted RBP12.95□□□□□ -0.34
UBA3-208ENST00000465627 NUP155O75694 1391 aa12.94□□□□□ -0.34
UBA3-208ENST00000465627 ANKRD30BQ9BXX2 1392 aa12.94□□□□□ -0.34
UBA3-208ENST00000465627 NPATQ14207 1427 aa12.93□□□□□ -0.34
UBA3-208ENST00000465627 ESF1Q9H501 851 aaKnown RBP12.92□□□□□ -0.34
UBA3-208ENST00000465627 LMTK2Q8IWU2 1503 aa12.92□□□□□ -0.34
UBA3-208ENST00000465627 AGLP35573 1532 aa12.91□□□□□ -0.34
UBA3-208ENST00000465627 PRKAR2AP13861 404 aaKnown RBP12.91□□□□□ -0.34
UBA3-208ENST00000465627 TET3O43151 1660 aa12.9□□□□□ -0.35
UBA3-208ENST00000465627 SIN3AQ96ST3 1273 aa12.89□□□□□ -0.35
UBA3-208ENST00000465627 MROH2AA6NES4 1674 aa12.89□□□□□ -0.35
UBA3-208ENST00000465627 E9PCH4 1651 aa12.89□□□□□ -0.35
UBA3-208ENST00000465627 RPRD2Q5VT52 1461 aaKnown RBP12.88□□□□□ -0.35
UBA3-208ENST00000465627 ZRANB1Q9UGI0 708 aa12.88□□□□□ -0.35
UBA3-208ENST00000465627 EFCAB6Q5THR3 1501 aa12.86□□□□□ -0.35
UBA3-208ENST00000465627 KIF3BO15066 747 aa12.86□□□□□ -0.35
UBA3-208ENST00000465627 TIMELESSQ9UNS1 1208 aa12.86□□□□□ -0.35
UBA3-208ENST00000465627 XIRP1Q702N8 1843 aaKnown RBP12.86□□□□□ -0.35
UBA3-208ENST00000465627 CNTLNQ9NXG0 1405 aa12.85□□□□□ -0.35
UBA3-208ENST00000465627 CEP152O94986 1710 aa12.85□□□□□ -0.35
UBA3-208ENST00000465627 ABCC3O15438 1527 aa12.85□□□□□ -0.35
UBA3-208ENST00000465627 ZC3H13Q5T200 1668 aaKnown RBP12.84□□□□□ -0.35
UBA3-208ENST00000465627 ZMYM3Q14202 1370 aa12.84□□□□□ -0.35
UBA3-208ENST00000465627 CLTCQ00610 1675 aaKnown RBP12.82□□□□□ -0.36
UBA3-208ENST00000465627 SPHKAPQ2M3C7 1700 aa12.82□□□□□ -0.36
UBA3-208ENST00000465627 MYT1LQ9UL68 1186 aa12.81□□□□□ -0.36
UBA3-208ENST00000465627 TRPM2O94759 1503 aa12.81□□□□□ -0.36
UBA3-208ENST00000465627 SYNMO15061 1565 aa12.81□□□□□ -0.36
UBA3-208ENST00000465627 EVX2Q03828 476 aa12.81□□□□□ -0.36
UBA3-208ENST00000465627 LRP6O75581 1613 aa12.8□□□□□ -0.36
UBA3-208ENST00000465627 KANK1Q14678 1352 aa12.8□□□□□ -0.36
UBA3-208ENST00000465627 ROBO1Q9Y6N7 1651 aa12.8□□□□□ -0.36
UBA3-208ENST00000465627 RXRBP28702 533 aa12.8□□□□□ -0.36
UBA3-208ENST00000465627 ARHGAP31Q2M1Z3 1444 aa12.79□□□□□ -0.36
UBA3-208ENST00000465627 NEUROD1Q13562 356 aa12.79□□□□□ -0.36
UBA3-208ENST00000465627 FAM135BQ49AJ0 1406 aa12.79□□□□□ -0.36
UBA3-208ENST00000465627 A2ML1A8K2U0 1454 aa12.78□□□□□ -0.36
UBA3-208ENST00000465627 CDK12Q9NYV4 1490 aaPredicted RBP12.78□□□□□ -0.36
UBA3-208ENST00000465627 LRP5O75197 1615 aa12.77□□□□□ -0.37
UBA3-208ENST00000465627 PPP1R15AO75807 674 aaPredicted RBP12.77□□□□□ -0.37
UBA3-208ENST00000465627 CLTCL1P53675 1640 aa12.77□□□□□ -0.37
UBA3-208ENST00000465627 ZNF772Q68DY9 489 aaPredicted RBP12.77□□□□□ -0.37
UBA3-208ENST00000465627 NOS1P29475 1434 aa12.76□□□□□ -0.37
UBA3-208ENST00000465627 PRR29P0C7W0 189 aa12.76□□□□□ -0.37
UBA3-208ENST00000465627 RGS12O14924 1447 aa12.75□□□□□ -0.37
UBA3-208ENST00000465627 SPATA31E1Q6ZUB1 1445 aa12.75□□□□□ -0.37
UBA3-208ENST00000465627 TONSLQ96HA7 1378 aa12.75□□□□□ -0.37
UBA3-208ENST00000465627 GGT6Q6P531 493 aa12.75□□□□□ -0.37
UBA3-208ENST00000465627 PHLPP1O60346 1717 aa12.75□□□□□ -0.37
UBA3-208ENST00000465627 PIK3C2BO00750 1634 aa12.75□□□□□ -0.37
UBA3-208ENST00000465627 L3MBTL2Q969R5 705 aa12.74□□□□□ -0.37
UBA3-208ENST00000465627 CCDC144AA2RUR9 1427 aa12.74□□□□□ -0.37
UBA3-208ENST00000465627 NPHP4O75161 1426 aaPredicted RBP12.74□□□□□ -0.37
UBA3-208ENST00000465627 EP400Q96L91 3159 aa12.74□□□□□ -0.37
UBA3-208ENST00000465627 IQGAP1P46940 1657 aa12.73□□□□□ -0.37
UBA3-208ENST00000465627 C19orf67A6NJJ6 358 aa12.73□□□□□ -0.37
UBA3-208ENST00000465627 YY1P25490 414 aa12.73□□□□□ -0.37
UBA3-208ENST00000465627 NUTM2BA6NNL0 878 aaPredicted RBP12.72□□□□□ -0.37
UBA3-208ENST00000465627 NUTM2EB1AL46 878 aaPredicted RBP12.72□□□□□ -0.37
UBA3-208ENST00000465627 NUTM2DQ5VT03 806 aaPredicted RBP12.72□□□□□ -0.37
UBA3-208ENST00000465627 NUTM2AQ8IVF1 878 aaPredicted RBP12.72□□□□□ -0.37
UBA3-208ENST00000465627 UGGT1Q9NYU2 1555 aa12.72□□□□□ -0.37
UBA3-208ENST00000465627 WASHC2CQ9Y4E1 1318 aa12.72□□□□□ -0.37
UBA3-208ENST00000465627 MEX3CQ5U5Q3 659 aaKnown RBP12.71□□□□□ -0.37
UBA3-208ENST00000465627 CHADLQ6NUI6 762 aa12.7□□□□□ -0.38
UBA3-208ENST00000465627 JCADQ9P266 1359 aa12.7□□□□□ -0.38
UBA3-208ENST00000465627 ADGRB3O60242 1522 aa12.69□□□□□ -0.38
UBA3-208ENST00000465627 MED14O60244 1454 aa12.69□□□□□ -0.38
UBA3-208ENST00000465627 ANKLE2Q86XL3 938 aa12.69□□□□□ -0.38
UBA3-208ENST00000465627 CFAP65Q6ZU64 1925 aaKnown RBP12.68□□□□□ -0.38
UBA3-208ENST00000465627 ERVK-7P63135 1459 aa12.68□□□□□ -0.38
UBA3-208ENST00000465627 IFT172Q9UG01 1749 aa12.68□□□□□ -0.38
UBA3-208ENST00000465627 SENP3-EIF4A1A0A087X0R7 540 aa12.68□□□□□ -0.38
UBA3-208ENST00000465627 NBPF8Q3BBV2 869 aa12.68□□□□□ -0.38
UBA3-208ENST00000465627 KIF1BO60333 1816 aa12.67□□□□□ -0.38
UBA3-208ENST00000465627 COL16A1Q07092 1604 aaPredicted RBP12.65□□□□□ -0.38
UBA3-208ENST00000465627 TMEM131LA2VDJ0 1609 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms