RNA–Protein interactions for RNA: ENST00000465386.1

USP9X-205, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-205ENST00000465386 NBPF3Q9H094 633 aa9.07□□□□□ -0.96
USP9X-205ENST00000465386 TYW1BQ6NUM6 668 aa9.06□□□□□ -0.96
USP9X-205ENST00000465386 NYAP1Q6ZVC0 841 aa9.06□□□□□ -0.96
USP9X-205ENST00000465386 IRF6O14896 467 aa9.05□□□□□ -0.96
USP9X-205ENST00000465386 FOSBP53539 338 aa9.05□□□□□ -0.96
USP9X-205ENST00000465386 FBXW7Q969H0 707 aa9.05□□□□□ -0.96
USP9X-205ENST00000465386 NPDC1Q9NQX5 325 aaPredicted RBP9.05□□□□□ -0.96
USP9X-205ENST00000465386 FECHP22830 423 aa9.04□□□□□ -0.96
USP9X-205ENST00000465386 PDE4DQ08499 809 aa9.04□□□□□ -0.96
USP9X-205ENST00000465386 CCDC102AQ96A19 550 aa9.04□□□□□ -0.96
USP9X-205ENST00000465386 CDHR5Q9HBB8 845 aa9.04□□□□□ -0.96
USP9X-205ENST00000465386 NESP48681 1621 aa9.03□□□□□ -0.96
USP9X-205ENST00000465386 MAP3K7O43318 606 aa9.03□□□□□ -0.96
USP9X-205ENST00000465386 LCE2AQ5TA79 106 aaPredicted RBP9.03□□□□□ -0.96
USP9X-205ENST00000465386 MRC2Q9UBG0 1479 aa9.02□□□□□ -0.96
USP9X-205ENST00000465386 ANKK1Q8NFD2 765 aa9.02□□□□□ -0.97
USP9X-205ENST00000465386 PRKD2Q9BZL6 878 aa9.02□□□□□ -0.97
USP9X-205ENST00000465386 GPBP1L1Q9HC44 474 aaPredicted RBP9.02□□□□□ -0.97
USP9X-205ENST00000465386 PTPREP23469 700 aa9.01□□□□□ -0.97
USP9X-205ENST00000465386 AMHR2Q16671 573 aa9.01□□□□□ -0.97
USP9X-205ENST00000465386 TSR1Q2NL82 804 aaKnown RBP9.01□□□□□ -0.97
USP9X-205ENST00000465386 RBM33Q96EV2 1170 aaKnown RBP9.01□□□□□ -0.97
USP9X-205ENST00000465386 KDM4CQ9H3R0 1056 aa9□□□□□ -0.97
USP9X-205ENST00000465386 GTF3C3Q9Y5Q9 886 aa9□□□□□ -0.97
USP9X-205ENST00000465386 BCAMP50895 628 aa8.99□□□□□ -0.97
USP9X-205ENST00000465386 ZNF454Q8N9F8 522 aa8.99□□□□□ -0.97
USP9X-205ENST00000465386 CUX2O14529 1486 aa8.99□□□□□ -0.97
USP9X-205ENST00000465386 SOWAHBA6NEL2 793 aa8.98□□□□□ -0.97
USP9X-205ENST00000465386 ZDHHC16Q969W1 377 aa8.98□□□□□ -0.97
USP9X-205ENST00000465386 V9GY48 417 aaPredicted RBP8.98□□□□□ -0.97
USP9X-205ENST00000465386 WRNQ14191 1432 aaPredicted RBP eCLIP8.97□□□□□ -0.97
USP9X-205ENST00000465386 C6orf132Q5T0Z8 1188 aa8.97□□□□□ -0.97
USP9X-205ENST00000465386 TREML4Q6UXN2 200 aa8.97□□□□□ -0.97
USP9X-205ENST00000465386 CERKQ8TCT0 537 aa8.96□□□□□ -0.98
USP9X-205ENST00000465386 DAXXQ9UER7 740 aaPredicted RBP8.96□□□□□ -0.98
USP9X-205ENST00000465386 PARP9Q8IXQ6 854 aa8.95□□□□□ -0.98
USP9X-205ENST00000465386 ADAM33Q9BZ11 813 aa8.95□□□□□ -0.98
USP9X-205ENST00000465386 WBP1LQ9NX94 342 aa8.95□□□□□ -0.98
USP9X-205ENST00000465386 RBM27Q9P2N5 1060 aaKnown RBP8.94□□□□□ -0.98
USP9X-205ENST00000465386 PDZRN3Q9UPQ7 1066 aa8.94□□□□□ -0.98
USP9X-205ENST00000465386 WDR62O43379 1518 aa8.94□□□□□ -0.98
USP9X-205ENST00000465386 DNMBPQ6XZF7 1577 aa8.94□□□□□ -0.98
USP9X-205ENST00000465386 PRDM2Q13029 1718 aa8.94□□□□□ -0.98
USP9X-205ENST00000465386 TTC13Q8NBP0 860 aa8.93□□□□□ -0.98
USP9X-205ENST00000465386 TOPBP1Q92547 1522 aa8.91□□□□□ -0.98
USP9X-205ENST00000465386 IFT140Q96RY7 1462 aa8.91□□□□□ -0.98
USP9X-205ENST00000465386 STK17AQ9UEE5 414 aa8.91□□□□□ -0.98
USP9X-205ENST00000465386 RABGEF1Q9UJ41 708 aa8.91□□□□□ -0.98
USP9X-205ENST00000465386 PADI6Q6TGC4 694 aa8.9□□□□□ -0.98
USP9X-205ENST00000465386 IL27Q8NEV9 243 aa8.9□□□□□ -0.98
USP9X-205ENST00000465386 TMUB1Q9BVT8 246 aa8.9□□□□□ -0.98
USP9X-205ENST00000465386 URB2Q14146 1524 aaKnown RBP8.9□□□□□ -0.99
USP9X-205ENST00000465386 POTECB2RU33 542 aa8.89□□□□□ -0.99
USP9X-205ENST00000465386 LAPTM4BQ86VI4 370 aa8.89□□□□□ -0.99
USP9X-205ENST00000465386 FAM117AQ9C073 453 aa8.89□□□□□ -0.99
USP9X-205ENST00000465386 SOGA1O94964 1423 aa8.88□□□□□ -0.99
USP9X-205ENST00000465386 PRSS12P56730 875 aa8.88□□□□□ -0.99
USP9X-205ENST00000465386 TTLL12Q14166 644 aaPredicted RBP8.88□□□□□ -0.99
USP9X-205ENST00000465386 PHOX2BQ99453 314 aa8.88□□□□□ -0.99
USP9X-205ENST00000465386 ADGRG1Q9Y653 693 aa8.88□□□□□ -0.99
USP9X-205ENST00000465386 THOC2Q8NI27 1593 aaKnown RBP8.87□□□□□ -0.99
USP9X-205ENST00000465386 PLEKHG3A1L390 1219 aa8.87□□□□□ -0.99
USP9X-205ENST00000465386 OATP04181 439 aa8.87□□□□□ -0.99
USP9X-205ENST00000465386 GIGYF2Q6Y7W6 1299 aaKnown RBP8.87□□□□□ -0.99
USP9X-205ENST00000465386 METTL3Q86U44 580 aaKnown RBP8.87□□□□□ -0.99
USP9X-205ENST00000465386 DDRGK1Q96HY6 314 aa8.87□□□□□ -0.99
USP9X-205ENST00000465386 REPIN1Q9BWE0 567 aaKnown RBP8.87□□□□□ -0.99
USP9X-205ENST00000465386 TOP2BQ02880 1626 aa8.87□□□□□ -0.99
USP9X-205ENST00000465386 KIF21AQ7Z4S6 1674 aa8.86□□□□□ -0.99
USP9X-205ENST00000465386 COL9A1P20849 921 aa8.86□□□□□ -0.99
USP9X-205ENST00000465386 CLCN1P35523 988 aa8.86□□□□□ -0.99
USP9X-205ENST00000465386 ERICH6Q7L0X2 663 aa8.86□□□□□ -0.99
USP9X-205ENST00000465386 CDCA7LQ96GN5 454 aa8.86□□□□□ -0.99
USP9X-205ENST00000465386 TIMELESSQ9UNS1 1208 aa8.86□□□□□ -0.99
USP9X-205ENST00000465386 WDR97A6NE52 1622 aa8.86□□□□□ -0.99
USP9X-205ENST00000465386 CUX1P39880 1505 aa8.85□□□□□ -0.99
USP9X-205ENST00000465386 POLA1P09884 1462 aaPredicted RBP8.85□□□□□ -0.99
USP9X-205ENST00000465386 FGD5Q6ZNL6 1462 aa8.85□□□□□ -0.99
USP9X-205ENST00000465386 PPP1R3GB7ZBB8 358 aa8.85□□□□□ -0.99
USP9X-205ENST00000465386 PXYLP1Q8TE99 480 aa8.85□□□□□ -0.99
USP9X-205ENST00000465386 ZFRQ96KR1 1074 aaKnown RBP8.85□□□□□ -0.99
USP9X-205ENST00000465386 GPCPD1Q9NPB8 672 aa8.85□□□□□ -0.99
USP9X-205ENST00000465386 EEA1Q15075 1411 aa8.84□□□□□ -0.99
USP9X-205ENST00000465386 FAM161AQ3B820 660 aa8.84□□□□□ -0.99
USP9X-205ENST00000465386 FAM198AQ9UFP1 575 aa8.84□□□□□ -0.99
USP9X-205ENST00000465386 KIF27Q86VH2 1401 aa8.83□□□□□ -1
USP9X-205ENST00000465386 MS4A1P11836 297 aa8.83□□□□□ -1
USP9X-205ENST00000465386 MDM2Q00987 491 aaPredicted RBP8.83□□□□□ -1
USP9X-205ENST00000465386 ABCA10Q8WWZ4 1543 aa8.83□□□□□ -1
USP9X-205ENST00000465386 PPP1R18Q6NYC8 613 aa8.82□□□□□ -1
USP9X-205ENST00000465386 BIVM-ERCC5R4GMW8 1640 aa8.82□□□□□ -1
USP9X-205ENST00000465386 MYT1Q01538 1121 aa8.81□□□□□ -1
USP9X-205ENST00000465386 PROX2Q3B8N5 592 aa8.81□□□□□ -1
USP9X-205ENST00000465386 RBM46Q8TBY0 533 aaKnown RBP8.8□□□□□ -1
USP9X-205ENST00000465386 GOPCQ9HD26 462 aa8.8□□□□□ -1
USP9X-205ENST00000465386 TSR3Q9UJK0 312 aaKnown RBP8.8□□□□□ -1
USP9X-205ENST00000465386 TSKSQ9UJT2 592 aa8.8□□□□□ -1
USP9X-205ENST00000465386 TJAP1Q5JTD0 557 aa8.79□□□□□ -1
USP9X-205ENST00000465386 EYA1Q99502 592 aa8.79□□□□□ -1
USP9X-205ENST00000465386 FAM217BQ9NTX9 383 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms