RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 SLC24A1O60721 1099 aa9.1□□□□□ -0.95
TM9SF3-203ENST00000464654 FAM161AQ3B820 660 aa9.09□□□□□ -0.95
TM9SF3-203ENST00000464654 MAP2K5Q13163 448 aa9.07□□□□□ -0.96
TM9SF3-203ENST00000464654 LMOD2Q6P5Q4 547 aa9.07□□□□□ -0.96
TM9SF3-203ENST00000464654 PRR14Q9BWN1 585 aa9.07□□□□□ -0.96
TM9SF3-203ENST00000464654 RNF40O75150 1001 aa9.05□□□□□ -0.96
TM9SF3-203ENST00000464654 MINK1Q8N4C8 1332 aaPredicted RBP9.05□□□□□ -0.96
TM9SF3-203ENST00000464654 RGS20O76081 388 aa9.04□□□□□ -0.96
TM9SF3-203ENST00000464654 IRF6O14896 467 aa9.03□□□□□ -0.96
TM9SF3-203ENST00000464654 APLP1P51693 650 aa9.03□□□□□ -0.96
TM9SF3-203ENST00000464654 KCNC4Q03721 635 aa9.03□□□□□ -0.96
TM9SF3-203ENST00000464654 RSPH4AQ5TD94 716 aa9.02□□□□□ -0.97
TM9SF3-203ENST00000464654 DAXXQ9UER7 740 aaPredicted RBP9.02□□□□□ -0.97
TM9SF3-203ENST00000464654 TJAP1Q5JTD0 557 aa9.01□□□□□ -0.97
TM9SF3-203ENST00000464654 A0A0G2JS52 829 aa8.99□□□□□ -0.97
TM9SF3-203ENST00000464654 KMT5BQ4FZB7 885 aa8.99□□□□□ -0.97
TM9SF3-203ENST00000464654 PHOX2BQ99453 314 aa8.99□□□□□ -0.97
TM9SF3-203ENST00000464654 IL21Q9HBE4 155 aa8.99□□□□□ -0.97
TM9SF3-203ENST00000464654 ZMYND10O75800 440 aa8.98□□□□□ -0.97
TM9SF3-203ENST00000464654 SLC10A3P09131 477 aa8.98□□□□□ -0.97
TM9SF3-203ENST00000464654 BARGINQ6ZT62 677 aa8.98□□□□□ -0.97
TM9SF3-203ENST00000464654 SULF1Q8IWU6 871 aa8.98□□□□□ -0.97
TM9SF3-203ENST00000464654 MTRQ99707 1265 aa8.98□□□□□ -0.97
TM9SF3-203ENST00000464654 ACTN4O43707 911 aaKnown RBP8.97□□□□□ -0.97
TM9SF3-203ENST00000464654 ZC3H15Q8WU90 426 aaKnown RBP8.97□□□□□ -0.97
TM9SF3-203ENST00000464654 CFHP08603 1231 aa8.96□□□□□ -0.98
TM9SF3-203ENST00000464654 CCDC102AQ96A19 550 aa8.96□□□□□ -0.98
TM9SF3-203ENST00000464654 PCDHB3Q9Y5E6 796 aa8.95□□□□□ -0.98
TM9SF3-203ENST00000464654 BCANQ96GW7 911 aa8.94□□□□□ -0.98
TM9SF3-203ENST00000464654 Q6ZNB5 142 aa8.92□□□□□ -0.98
TM9SF3-203ENST00000464654 NLRP7Q8WX94 980 aa8.92□□□□□ -0.98
TM9SF3-203ENST00000464654 DDX11L8A8MPP1 907 aa8.91□□□□□ -0.98
TM9SF3-203ENST00000464654 ZPR1O75312 459 aa8.91□□□□□ -0.98
TM9SF3-203ENST00000464654 KRI1Q8N9T8 703 aaKnown RBP8.91□□□□□ -0.98
TM9SF3-203ENST00000464654 RDH13Q8NBN7 331 aa8.91□□□□□ -0.98
TM9SF3-203ENST00000464654 CLCN1P35523 988 aa8.9□□□□□ -0.98
TM9SF3-203ENST00000464654 GCGRP47871 477 aa8.9□□□□□ -0.98
TM9SF3-203ENST00000464654 COPS2P61201 443 aa8.9□□□□□ -0.98
TM9SF3-203ENST00000464654 BLOC1S3Q6QNY0 202 aa8.9□□□□□ -0.98
TM9SF3-203ENST00000464654 ZNF516Q92618 1163 aa8.9□□□□□ -0.98
TM9SF3-203ENST00000464654 NR1I2O75469 434 aa8.89□□□□□ -0.99
TM9SF3-203ENST00000464654 TMUB1Q9BVT8 246 aa8.89□□□□□ -0.99
TM9SF3-203ENST00000464654 GPCPD1Q9NPB8 672 aa8.89□□□□□ -0.99
TM9SF3-203ENST00000464654 CD46P15529 392 aa8.88□□□□□ -0.99
TM9SF3-203ENST00000464654 MDM2Q00987 491 aaPredicted RBP8.88□□□□□ -0.99
TM9SF3-203ENST00000464654 AMHR2Q16671 573 aa8.87□□□□□ -0.99
TM9SF3-203ENST00000464654 ATP6V1AP38606 617 aa8.86□□□□□ -0.99
TM9SF3-203ENST00000464654 GGCXP38435 758 aa8.85□□□□□ -0.99
TM9SF3-203ENST00000464654 FAM217BQ9NTX9 383 aaPredicted RBP8.85□□□□□ -0.99
TM9SF3-203ENST00000464654 FUT2Q10981 343 aa8.84□□□□□ -0.99
TM9SF3-203ENST00000464654 GRIPAP1Q4V328 841 aa8.84□□□□□ -0.99
TM9SF3-203ENST00000464654 MORN1Q5T089 497 aa8.84□□□□□ -0.99
TM9SF3-203ENST00000464654 SCUBE3Q8IX30 993 aa8.84□□□□□ -0.99
TM9SF3-203ENST00000464654 NKX2-3Q8TAU0 364 aa8.84□□□□□ -0.99
TM9SF3-203ENST00000464654 AK7Q96M32 723 aa8.84□□□□□ -0.99
TM9SF3-203ENST00000464654 USP46P62068 366 aa8.83□□□□□ -1
TM9SF3-203ENST00000464654 PPP1R18Q6NYC8 613 aa8.83□□□□□ -1
TM9SF3-203ENST00000464654 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.83□□□□□ -1
TM9SF3-203ENST00000464654 SALL2Q9Y467 1007 aaPredicted RBP8.83□□□□□ -1
TM9SF3-203ENST00000464654 ADH1BP00325 375 aa8.82□□□□□ -1
TM9SF3-203ENST00000464654 KDM4AO75164 1064 aa8.81□□□□□ -1
TM9SF3-203ENST00000464654 TRIM66O15016 1216 aa8.8□□□□□ -1
TM9SF3-203ENST00000464654 PUS10Q3MIT2 529 aaKnown RBP8.8□□□□□ -1
TM9SF3-203ENST00000464654 TTLL12Q14166 644 aaPredicted RBP8.79□□□□□ -1
TM9SF3-203ENST00000464654 REPIN1Q9BWE0 567 aaKnown RBP8.79□□□□□ -1
TM9SF3-203ENST00000464654 TLL1O43897 1013 aa8.78□□□□□ -1
TM9SF3-203ENST00000464654 SSTR3P32745 418 aaPredicted RBP8.78□□□□□ -1
TM9SF3-203ENST00000464654 THAP11Q96EK4 314 aa8.78□□□□□ -1
TM9SF3-203ENST00000464654 SPSB2Q99619 263 aa8.78□□□□□ -1
TM9SF3-203ENST00000464654 SLC27A5Q9Y2P5 690 aa8.78□□□□□ -1
TM9SF3-203ENST00000464654 FMNL1O95466 1100 aaPredicted RBP8.77□□□□□ -1.01
TM9SF3-203ENST00000464654 Q3C1V9 767 aa8.77□□□□□ -1.01
TM9SF3-203ENST00000464654 GIGYF2Q6Y7W6 1299 aaKnown RBP8.77□□□□□ -1.01
TM9SF3-203ENST00000464654 V9GY48 417 aaPredicted RBP8.77□□□□□ -1.01
TM9SF3-203ENST00000464654 BRICD5Q6PL45 260 aa8.76□□□□□ -1.01
TM9SF3-203ENST00000464654 ANKLE1Q8NAG6 615 aa8.76□□□□□ -1.01
TM9SF3-203ENST00000464654 SLC6A16Q9GZN6 736 aa8.76□□□□□ -1.01
TM9SF3-203ENST00000464654 RNF223E7ERA6 249 aa8.75□□□□□ -1.01
TM9SF3-203ENST00000464654 HOXA2O43364 376 aa8.75□□□□□ -1.01
TM9SF3-203ENST00000464654 PARP9Q8IXQ6 854 aa8.75□□□□□ -1.01
TM9SF3-203ENST00000464654 NUTM1Q86Y26 1132 aa8.74□□□□□ -1.01
TM9SF3-203ENST00000464654 SLC24A3Q9HC58 644 aa8.74□□□□□ -1.01
TM9SF3-203ENST00000464654 S1PR4O95977 384 aa8.73□□□□□ -1.01
TM9SF3-203ENST00000464654 PDE4DQ08499 809 aa8.72□□□□□ -1.01
TM9SF3-203ENST00000464654 DIXDC1Q155Q3 683 aa8.72□□□□□ -1.01
TM9SF3-203ENST00000464654 MSS51Q4VC12 460 aa8.72□□□□□ -1.01
TM9SF3-203ENST00000464654 PRKD2Q9BZL6 878 aa8.72□□□□□ -1.01
TM9SF3-203ENST00000464654 FAM160A2Q8N612 972 aaPredicted RBP8.71□□□□□ -1.02
TM9SF3-203ENST00000464654 GJA5P36382 358 aa8.7□□□□□ -1.02
TM9SF3-203ENST00000464654 SPIRE2Q8WWL2 714 aa8.7□□□□□ -1.02
TM9SF3-203ENST00000464654 BEGAINQ9BUH8 593 aa8.7□□□□□ -1.02
TM9SF3-203ENST00000464654 RNF19BQ6ZMZ0 732 aa8.69□□□□□ -1.02
TM9SF3-203ENST00000464654 MS4A1P11836 297 aa8.68□□□□□ -1.02
TM9SF3-203ENST00000464654 USB1Q9BQ65 265 aaKnown RBP8.68□□□□□ -1.02
TM9SF3-203ENST00000464654 SLC19A1P41440 591 aa8.67□□□□□ -1.02
TM9SF3-203ENST00000464654 MMP16P51512 607 aa8.67□□□□□ -1.02
TM9SF3-203ENST00000464654 TRAF7Q6Q0C0 670 aa8.67□□□□□ -1.02
TM9SF3-203ENST00000464654 HLA-CQ95604 372 aa8.67□□□□□ -1.02
TM9SF3-203ENST00000464654 FDX1P10109 184 aa8.66□□□□□ -1.02
TM9SF3-203ENST00000464654 LAPTM4AQ15012 233 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms