RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 TMEM2Q9UHN6 1383 aa15.22■□□□□ 0.03
RTF1-202ENST00000462276 MYOM2P54296 1465 aa15.2■□□□□ 0.02
RTF1-202ENST00000462276 KDM5AP29375 1690 aaKnown RBP15.19■□□□□ 0.02
RTF1-202ENST00000462276 TMEM131LA2VDJ0 1609 aa15.18■□□□□ 0.02
RTF1-202ENST00000462276 CFAP65Q6ZU64 1925 aaKnown RBP15.18■□□□□ 0.02
RTF1-202ENST00000462276 PRAG1Q86YV5 1406 aa15.17■□□□□ 0.02
RTF1-202ENST00000462276 RIMS2Q9UQ26 1411 aa15.17■□□□□ 0.02
RTF1-202ENST00000462276 NBPF8Q3BBV2 869 aa15.17■□□□□ 0.02
RTF1-202ENST00000462276 TXNDC2Q86VQ3 553 aa15.17■□□□□ 0.02
RTF1-202ENST00000462276 ANKLE2Q86XL3 938 aa15.17■□□□□ 0.02
RTF1-202ENST00000462276 KIF1BO60333 1816 aa15.17■□□□□ 0.02
RTF1-202ENST00000462276 C14orf93Q9H972 538 aaKnown RBP15.16■□□□□ 0.02
RTF1-202ENST00000462276 ADGRF5Q8IZF2 1346 aa15.16■□□□□ 0.02
RTF1-202ENST00000462276 NRXN1Q9ULB1 1477 aa15.15■□□□□ 0.02
RTF1-202ENST00000462276 ARHGAP23Q9P227 1491 aa15.14■□□□□ 0.01
RTF1-202ENST00000462276 SLIT1O75093 1534 aa15.14■□□□□ 0.01
RTF1-202ENST00000462276 CEP170BQ9Y4F5 1589 aaPredicted RBP15.14■□□□□ 0.01
RTF1-202ENST00000462276 FBXO41Q8TF61 875 aa15.13■□□□□ 0.01
RTF1-202ENST00000462276 NEXMIFQ5QGS0 1516 aa15.12■□□□□ 0.01
RTF1-202ENST00000462276 PIK3C2GO75747 1445 aa15.12■□□□□ 0.01
RTF1-202ENST00000462276 GPRASP1Q5JY77 1395 aa15.11■□□□□ 0.01
RTF1-202ENST00000462276 PLEKHG1Q9ULL1 1385 aa15.11■□□□□ 0.01
RTF1-202ENST00000462276 MYO3AQ8NEV4 1616 aa15.11■□□□□ 0.01
RTF1-202ENST00000462276 LTKP29376 864 aa15.11■□□□□ 0.01
RTF1-202ENST00000462276 LMTK3Q96Q04 1460 aa15.11■□□□□ 0.01
RTF1-202ENST00000462276 RALGAPBQ86X10 1494 aa15.1■□□□□ 0.01
RTF1-202ENST00000462276 CARD11Q9BXL7 1154 aa15.1■□□□□ 0.01
RTF1-202ENST00000462276 ROCK2O75116 1388 aaKnown RBP15.1■□□□□ 0.01
RTF1-202ENST00000462276 SCAF11Q99590 1463 aaKnown RBP15.09■□□□□ 0.01
RTF1-202ENST00000462276 CFAP70Q5T0N1 1121 aa15.09■□□□□ 0.01
RTF1-202ENST00000462276 NUTM2DQ5VT03 806 aaPredicted RBP15.09■□□□□ 0.01
RTF1-202ENST00000462276 TBX22Q9Y458 520 aa15.09■□□□□ 0.01
RTF1-202ENST00000462276 UBR1Q8IWV7 1749 aa15.09■□□□□ 0.01
RTF1-202ENST00000462276 SLC24A1O60721 1099 aa15.08■□□□□ 0
RTF1-202ENST00000462276 BCANQ96GW7 911 aa15.08■□□□□ 0
RTF1-202ENST00000462276 ZNF142P52746 1687 aaPredicted RBP15.07■□□□□ 0
RTF1-202ENST00000462276 EIF4G2P78344 907 aaKnown RBP eCLIP15.07■□□□□ 0
RTF1-202ENST00000462276 NBPF1Q3BBV0 1214 aa15.06■□□□□ 0
RTF1-202ENST00000462276 PPLO60437 1756 aa15.04■□□□□ -0
RTF1-202ENST00000462276 MED14O60244 1454 aa15.03■□□□□ -0
RTF1-202ENST00000462276 PIK3R4Q99570 1358 aa15.03■□□□□ -0
RTF1-202ENST00000462276 SIRT1Q96EB6 747 aa15.03■□□□□ -0
RTF1-202ENST00000462276 IFT172Q9UG01 1749 aa15.03■□□□□ -0
RTF1-202ENST00000462276 SETBP1Q9Y6X0 1596 aa15.02■□□□□ -0
RTF1-202ENST00000462276 EIF3AQ14152 1382 aaKnown RBP15.02■□□□□ -0
RTF1-202ENST00000462276 DMRT2Q9Y5R5 561 aa15.01□□□□□ -0.01
RTF1-202ENST00000462276 NPHP4O75161 1426 aaPredicted RBP15□□□□□ -0.01
RTF1-202ENST00000462276 ADAMTS13Q76LX8 1427 aa15□□□□□ -0.01
RTF1-202ENST00000462276 KIAA1210Q9ULL0 1709 aa15□□□□□ -0.01
RTF1-202ENST00000462276 ABCC11Q96J66 1382 aa15□□□□□ -0.01
RTF1-202ENST00000462276 USP47Q96K76 1375 aa15□□□□□ -0.01
RTF1-202ENST00000462276 TMEM132EQ6IEE7 984 aa15□□□□□ -0.01
RTF1-202ENST00000462276 LRPPRCP42704 1394 aaKnown RBP14.99□□□□□ -0.01
RTF1-202ENST00000462276 NCKAP5LQ9HCH0 1330 aa14.99□□□□□ -0.01
RTF1-202ENST00000462276 HSPA2P54652 639 aa14.99□□□□□ -0.01
RTF1-202ENST00000462276 SLC26A8Q96RN1 970 aa14.99□□□□□ -0.01
RTF1-202ENST00000462276 LAMC1P11047 1609 aa14.99□□□□□ -0.01
RTF1-202ENST00000462276 ALKQ9UM73 1620 aa14.99□□□□□ -0.01
RTF1-202ENST00000462276 HSPA5P11021 654 aaKnown RBP14.98□□□□□ -0.01
RTF1-202ENST00000462276 MYO5BQ9ULV0 1848 aa14.97□□□□□ -0.01
RTF1-202ENST00000462276 TRPM1Q7Z4N2 1603 aa14.97□□□□□ -0.01
RTF1-202ENST00000462276 ZNF316A6NFI3 1004 aaPredicted RBP14.97□□□□□ -0.01
RTF1-202ENST00000462276 YTHDC2Q9H6S0 1430 aaKnown RBP14.97□□□□□ -0.01
RTF1-202ENST00000462276 ADGRB1O14514 1584 aa14.97□□□□□ -0.01
RTF1-202ENST00000462276 DIP2AQ14689 1571 aa14.97□□□□□ -0.01
RTF1-202ENST00000462276 METP08581 1390 aa14.97□□□□□ -0.01
RTF1-202ENST00000462276 ST20-MTHFSA0A0A6YYL1 179 aa14.96□□□□□ -0.01
RTF1-202ENST00000462276 TRAK1Q9UPV9 953 aa14.95□□□□□ -0.02
RTF1-202ENST00000462276 TECPR2O15040 1411 aa14.94□□□□□ -0.02
RTF1-202ENST00000462276 STK26Q9P289 416 aa14.94□□□□□ -0.02
RTF1-202ENST00000462276 CENPJQ9HC77 1338 aaPredicted RBP14.93□□□□□ -0.02
RTF1-202ENST00000462276 KCNA6P17658 529 aa14.93□□□□□ -0.02
RTF1-202ENST00000462276 CDCA8Q53HL2 280 aa14.93□□□□□ -0.02
RTF1-202ENST00000462276 AMOTL2Q9Y2J4 779 aa14.93□□□□□ -0.02
RTF1-202ENST00000462276 SBNO2Q9Y2G9 1366 aa14.93□□□□□ -0.02
RTF1-202ENST00000462276 FAM135BQ49AJ0 1406 aa14.92□□□□□ -0.02
RTF1-202ENST00000462276 POGKQ9P215 609 aa14.92□□□□□ -0.02
RTF1-202ENST00000462276 PUS7Q96PZ0 661 aaKnown RBP14.91□□□□□ -0.02
RTF1-202ENST00000462276 TESK2Q96S53 571 aa14.91□□□□□ -0.02
RTF1-202ENST00000462276 NRXN3Q9Y4C0 1643 aa14.91□□□□□ -0.02
RTF1-202ENST00000462276 DLC1Q96QB1 1528 aa14.91□□□□□ -0.02
RTF1-202ENST00000462276 TMF1P82094 1093 aa14.9□□□□□ -0.02
RTF1-202ENST00000462276 PRAM1Q96QH2 718 aa14.9□□□□□ -0.02
RTF1-202ENST00000462276 ASXL1Q8IXJ9 1541 aa14.88□□□□□ -0.03
RTF1-202ENST00000462276 PTCH1Q13635 1447 aa14.88□□□□□ -0.03
RTF1-202ENST00000462276 CERKQ8TCT0 537 aa14.87□□□□□ -0.03
RTF1-202ENST00000462276 PTPRUQ92729 1446 aa14.86□□□□□ -0.03
RTF1-202ENST00000462276 IQGAP1P46940 1657 aa14.86□□□□□ -0.03
RTF1-202ENST00000462276 EVC2Q86UK5 1308 aa14.86□□□□□ -0.03
RTF1-202ENST00000462276 ROBO2Q9HCK4 1378 aa14.85□□□□□ -0.03
RTF1-202ENST00000462276 WAPLQ7Z5K2 1190 aa14.85□□□□□ -0.03
RTF1-202ENST00000462276 HIRIP3Q9BW71 556 aaPredicted RBP14.85□□□□□ -0.03
RTF1-202ENST00000462276 POLR1AO95602 1720 aaPredicted RBP14.84□□□□□ -0.03
RTF1-202ENST00000462276 NCOA3Q9Y6Q9 1424 aa14.83□□□□□ -0.03
RTF1-202ENST00000462276 SETD1AO15047 1707 aaKnown RBP14.83□□□□□ -0.03
RTF1-202ENST00000462276 PROSER2Q86WR7 435 aaPredicted RBP14.82□□□□□ -0.04
RTF1-202ENST00000462276 NKTRP30414 1462 aaKnown RBP14.82□□□□□ -0.04
RTF1-202ENST00000462276 CPS1P31327 1500 aa14.82□□□□□ -0.04
RTF1-202ENST00000462276 CCDC7Q96M83 1385 aa14.81□□□□□ -0.04
RTF1-202ENST00000462276 WASLO00401 505 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms