RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 KCNA6P17658 529 aa19.8■□□□□ 0.76
RAB11FIP3-207ENST00000461009 E9PCH4 1651 aa19.79■□□□□ 0.76
RAB11FIP3-207ENST00000461009 RIMS2Q9UQ26 1411 aa19.78■□□□□ 0.76
RAB11FIP3-207ENST00000461009 STRCP1A6NGW2 1772 aa19.78■□□□□ 0.76
RAB11FIP3-207ENST00000461009 HSPA1LP34931 641 aa19.77■□□□□ 0.76
RAB11FIP3-207ENST00000461009 PLEKHG1Q9ULL1 1385 aa19.76■□□□□ 0.75
RAB11FIP3-207ENST00000461009 PROSER2Q86WR7 435 aaPredicted RBP19.76■□□□□ 0.75
RAB11FIP3-207ENST00000461009 TMEM131LA2VDJ0 1609 aa19.76■□□□□ 0.75
RAB11FIP3-207ENST00000461009 ACIN1Q9UKV3 1341 aaKnown RBP19.76■□□□□ 0.75
RAB11FIP3-207ENST00000461009 TRIM52Q96A61 297 aa19.74■□□□□ 0.75
RAB11FIP3-207ENST00000461009 ZFYVE9O95405 1425 aa19.74■□□□□ 0.75
RAB11FIP3-207ENST00000461009 SENP3Q9H4L4 574 aaPredicted RBP19.73■□□□□ 0.75
RAB11FIP3-207ENST00000461009 TBX22Q9Y458 520 aa19.72■□□□□ 0.75
RAB11FIP3-207ENST00000461009 MYO5BQ9ULV0 1848 aa19.72■□□□□ 0.75
RAB11FIP3-207ENST00000461009 ZNF326Q5BKZ1 582 aaKnown RBP19.71■□□□□ 0.75
RAB11FIP3-207ENST00000461009 TMEM94Q12767 1356 aa19.7■□□□□ 0.74
RAB11FIP3-207ENST00000461009 NKTRP30414 1462 aaKnown RBP19.69■□□□□ 0.74
RAB11FIP3-207ENST00000461009 NUTM2DQ5VT03 806 aaPredicted RBP19.69■□□□□ 0.74
RAB11FIP3-207ENST00000461009 SETD5Q9C0A6 1442 aa19.68■□□□□ 0.74
RAB11FIP3-207ENST00000461009 SPHKAPQ2M3C7 1700 aa19.67■□□□□ 0.74
RAB11FIP3-207ENST00000461009 MSH6P52701 1360 aa19.66■□□□□ 0.74
RAB11FIP3-207ENST00000461009 SLC4A1APQ9BWU0 796 aaKnown RBP19.65■□□□□ 0.74
RAB11FIP3-207ENST00000461009 NWD1Q149M9 1564 aa19.65■□□□□ 0.74
RAB11FIP3-207ENST00000461009 ALKQ9UM73 1620 aa19.65■□□□□ 0.74
RAB11FIP3-207ENST00000461009 C14orf37Q86TY3 774 aa19.64■□□□□ 0.73
RAB11FIP3-207ENST00000461009 PIK3R4Q99570 1358 aa19.64■□□□□ 0.73
RAB11FIP3-207ENST00000461009 XIRP1Q702N8 1843 aaKnown RBP19.63■□□□□ 0.73
RAB11FIP3-207ENST00000461009 DIP2AQ14689 1571 aa19.63■□□□□ 0.73
RAB11FIP3-207ENST00000461009 RBM33Q96EV2 1170 aaKnown RBP19.63■□□□□ 0.73
RAB11FIP3-207ENST00000461009 FAM135BQ49AJ0 1406 aa19.61■□□□□ 0.73
RAB11FIP3-207ENST00000461009 CHD2O14647 1828 aaKnown RBP19.61■□□□□ 0.73
RAB11FIP3-207ENST00000461009 NCOA3Q9Y6Q9 1424 aa19.6■□□□□ 0.73
RAB11FIP3-207ENST00000461009 HRCP23327 699 aa19.6■□□□□ 0.73
RAB11FIP3-207ENST00000461009 TRPM2O94759 1503 aa19.6■□□□□ 0.73
RAB11FIP3-207ENST00000461009 ADAMTS13Q76LX8 1427 aa19.59■□□□□ 0.73
RAB11FIP3-207ENST00000461009 ILDR2Q71H61 639 aa19.59■□□□□ 0.73
RAB11FIP3-207ENST00000461009 PHF23Q9BUL5 403 aaPredicted RBP19.59■□□□□ 0.73
RAB11FIP3-207ENST00000461009 SLAIN2Q9P270 581 aa19.58■□□□□ 0.72
RAB11FIP3-207ENST00000461009 AMOTL2Q9Y2J4 779 aa19.58■□□□□ 0.72
RAB11FIP3-207ENST00000461009 RAB3GAP2Q9H2M9 1393 aa19.57■□□□□ 0.72
RAB11FIP3-207ENST00000461009 KIF1BO60333 1816 aa19.56■□□□□ 0.72
RAB11FIP3-207ENST00000461009 VGFO15240 615 aaPredicted RBP19.56■□□□□ 0.72
RAB11FIP3-207ENST00000461009 ATF3P18847 181 aa19.56■□□□□ 0.72
RAB11FIP3-207ENST00000461009 MPHOSPH9Q99550 1183 aa19.56■□□□□ 0.72
RAB11FIP3-207ENST00000461009 MED1Q15648 1581 aaPredicted RBP19.55■□□□□ 0.72
RAB11FIP3-207ENST00000461009 CADPS2Q86UW7 1296 aa19.55■□□□□ 0.72
RAB11FIP3-207ENST00000461009 C19orf44Q9H6X5 657 aa19.55■□□□□ 0.72
RAB11FIP3-207ENST00000461009 CLTCL1P53675 1640 aa19.54■□□□□ 0.72
RAB11FIP3-207ENST00000461009 RPGRIP1LQ68CZ1 1315 aa19.54■□□□□ 0.72
RAB11FIP3-207ENST00000461009 SOCS7O14512 581 aa19.54■□□□□ 0.72
RAB11FIP3-207ENST00000461009 TRIM26Q12899 539 aaPredicted RBP19.54■□□□□ 0.72
RAB11FIP3-207ENST00000461009 SETBP1Q9Y6X0 1596 aa19.53■□□□□ 0.72
RAB11FIP3-207ENST00000461009 ROBO1Q9Y6N7 1651 aa19.5■□□□□ 0.71
RAB11FIP3-207ENST00000461009 NEXMIFQ5QGS0 1516 aa19.49■□□□□ 0.71
RAB11FIP3-207ENST00000461009 FOXD1Q16676 465 aa19.47■□□□□ 0.71
RAB11FIP3-207ENST00000461009 CCDC144AA2RUR9 1427 aa19.47■□□□□ 0.71
RAB11FIP3-207ENST00000461009 PTPRUQ92729 1446 aa19.47■□□□□ 0.71
RAB11FIP3-207ENST00000461009 METP08581 1390 aa19.46■□□□□ 0.71
RAB11FIP3-207ENST00000461009 NRXN3Q9Y4C0 1643 aa19.45■□□□□ 0.7
RAB11FIP3-207ENST00000461009 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.43■□□□□ 0.7
RAB11FIP3-207ENST00000461009 DCCP43146 1447 aa19.42■□□□□ 0.7
RAB11FIP3-207ENST00000461009 RGL3Q3MIN7 710 aa19.41■□□□□ 0.7
RAB11FIP3-207ENST00000461009 PHLPP1O60346 1717 aa19.41■□□□□ 0.7
RAB11FIP3-207ENST00000461009 XRN1Q8IZH2 1706 aaKnown RBP19.41■□□□□ 0.7
RAB11FIP3-207ENST00000461009 JCADQ9P266 1359 aa19.41■□□□□ 0.7
RAB11FIP3-207ENST00000461009 ANKRD30BQ9BXX2 1392 aa19.38■□□□□ 0.69
RAB11FIP3-207ENST00000461009 PPLO60437 1756 aa19.37■□□□□ 0.69
RAB11FIP3-207ENST00000461009 ADGRL3Q9HAR2 1447 aa19.35■□□□□ 0.69
RAB11FIP3-207ENST00000461009 BRINP3Q76B58 766 aa19.35■□□□□ 0.69
RAB11FIP3-207ENST00000461009 PTCH1Q13635 1447 aa19.34■□□□□ 0.69
RAB11FIP3-207ENST00000461009 SPATA31A6Q5VVP1 1343 aa19.33■□□□□ 0.69
RAB11FIP3-207ENST00000461009 SPATA31E1Q6ZUB1 1445 aa19.33■□□□□ 0.68
RAB11FIP3-207ENST00000461009 MEX3CQ5U5Q3 659 aaKnown RBP19.32■□□□□ 0.68
RAB11FIP3-207ENST00000461009 AHDC1Q5TGY3 1603 aaPredicted RBP19.32■□□□□ 0.68
RAB11FIP3-207ENST00000461009 ADGRF5Q8IZF2 1346 aa19.31■□□□□ 0.68
RAB11FIP3-207ENST00000461009 MST1RQ04912 1400 aa19.31■□□□□ 0.68
RAB11FIP3-207ENST00000461009 COL16A1Q07092 1604 aaPredicted RBP19.3■□□□□ 0.68
RAB11FIP3-207ENST00000461009 ROBO2Q9HCK4 1378 aa19.3■□□□□ 0.68
RAB11FIP3-207ENST00000461009 LRRC59Q96AG4 307 aaKnown RBP19.29■□□□□ 0.68
RAB11FIP3-207ENST00000461009 ASXL1Q8IXJ9 1541 aa19.29■□□□□ 0.68
RAB11FIP3-207ENST00000461009 SETD1AO15047 1707 aaKnown RBP19.28■□□□□ 0.68
RAB11FIP3-207ENST00000461009 PRAG1Q86YV5 1406 aa19.28■□□□□ 0.68
RAB11FIP3-207ENST00000461009 STK26Q9P289 416 aa19.28■□□□□ 0.68
RAB11FIP3-207ENST00000461009 RGS17Q9UGC6 210 aaPredicted RBP19.28■□□□□ 0.68
RAB11FIP3-207ENST00000461009 NALCNQ8IZF0 1738 aa19.26■□□□□ 0.67
RAB11FIP3-207ENST00000461009 C1orf167Q5SNV9 1468 aa19.24■□□□□ 0.67
RAB11FIP3-207ENST00000461009 LRPPRCP42704 1394 aaKnown RBP19.24■□□□□ 0.67
RAB11FIP3-207ENST00000461009 PIK3C2GO75747 1445 aa19.24■□□□□ 0.67
RAB11FIP3-207ENST00000461009 IFT172Q9UG01 1749 aa19.23■□□□□ 0.67
RAB11FIP3-207ENST00000461009 NUTM2BA6NNL0 878 aaPredicted RBP19.23■□□□□ 0.67
RAB11FIP3-207ENST00000461009 NUTM2EB1AL46 878 aaPredicted RBP19.23■□□□□ 0.67
RAB11FIP3-207ENST00000461009 ZNF772Q68DY9 489 aaPredicted RBP19.23■□□□□ 0.67
RAB11FIP3-207ENST00000461009 TMEM132EQ6IEE7 984 aa19.23■□□□□ 0.67
RAB11FIP3-207ENST00000461009 NUTM2AQ8IVF1 878 aaPredicted RBP19.23■□□□□ 0.67
RAB11FIP3-207ENST00000461009 SHPRHQ149N8 1683 aa19.23■□□□□ 0.67
RAB11FIP3-207ENST00000461009 ABCC11Q96J66 1382 aa19.22■□□□□ 0.67
RAB11FIP3-207ENST00000461009 PCGF6Q9BYE7 350 aa19.22■□□□□ 0.67
RAB11FIP3-207ENST00000461009 C14orf93Q9H972 538 aaKnown RBP19.22■□□□□ 0.67
RAB11FIP3-207ENST00000461009 DHX57Q6P158 1386 aaKnown RBP19.21■□□□□ 0.67
RAB11FIP3-207ENST00000461009 POTEAQ6S8J7 498 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms