RNA–Protein interactions for RNA: ENST00000460060.5

C4A-244, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-244ENST00000460060 EFCAB6Q5THR3 1501 aa18.88■□□□□ 0.61
C4A-244ENST00000460060 LMTK2Q8IWU2 1503 aa18.88■□□□□ 0.61
C4A-244ENST00000460060 TET3O43151 1660 aa18.87■□□□□ 0.61
C4A-244ENST00000460060 PROSER2Q86WR7 435 aaPredicted RBP18.87■□□□□ 0.61
C4A-244ENST00000460060 SLC26A8Q96RN1 970 aa18.87■□□□□ 0.61
C4A-244ENST00000460060 ANKRD50Q9ULJ7 1429 aa18.87■□□□□ 0.61
C4A-244ENST00000460060 NOS1P29475 1434 aa18.85■□□□□ 0.61
C4A-244ENST00000460060 ACIN1Q9UKV3 1341 aaKnown RBP18.85■□□□□ 0.61
C4A-244ENST00000460060 GCC2Q8IWJ2 1684 aa18.84■□□□□ 0.61
C4A-244ENST00000460060 RBM33Q96EV2 1170 aaKnown RBP18.83■□□□□ 0.6
C4A-244ENST00000460060 SLC52A1Q9NWF4 448 aa18.83■□□□□ 0.6
C4A-244ENST00000460060 POTEAQ6S8J7 498 aa18.82■□□□□ 0.6
C4A-244ENST00000460060 ROBO1Q9Y6N7 1651 aa18.81■□□□□ 0.6
C4A-244ENST00000460060 TRIM52Q96A61 297 aa18.8■□□□□ 0.6
C4A-244ENST00000460060 ADGRB3O60242 1522 aa18.79■□□□□ 0.6
C4A-244ENST00000460060 NKTRP30414 1462 aaKnown RBP18.78■□□□□ 0.6
C4A-244ENST00000460060 NWD1Q149M9 1564 aa18.78■□□□□ 0.6
C4A-244ENST00000460060 BCANQ96GW7 911 aa18.78■□□□□ 0.6
C4A-244ENST00000460060 SLAIN2Q9P270 581 aa18.76■□□□□ 0.59
C4A-244ENST00000460060 MSH6P52701 1360 aa18.76■□□□□ 0.59
C4A-244ENST00000460060 CCER1Q8TC90 406 aaPredicted RBP18.75■□□□□ 0.59
C4A-244ENST00000460060 CHD2O14647 1828 aaKnown RBP18.74■□□□□ 0.59
C4A-244ENST00000460060 MYO5BQ9ULV0 1848 aa18.74■□□□□ 0.59
C4A-244ENST00000460060 ZFYVE9O95405 1425 aa18.74■□□□□ 0.59
C4A-244ENST00000460060 RPRD2Q5VT52 1461 aaKnown RBP18.73■□□□□ 0.59
C4A-244ENST00000460060 DHX57Q6P158 1386 aaKnown RBP18.73■□□□□ 0.59
C4A-244ENST00000460060 PLEKHG1Q9ULL1 1385 aa18.73■□□□□ 0.59
C4A-244ENST00000460060 HDGFP51858 240 aaKnown RBP18.73■□□□□ 0.59
C4A-244ENST00000460060 NUP155O75694 1391 aa18.71■□□□□ 0.59
C4A-244ENST00000460060 TBX22Q9Y458 520 aa18.71■□□□□ 0.59
C4A-244ENST00000460060 RIMS2Q9UQ26 1411 aa18.71■□□□□ 0.59
C4A-244ENST00000460060 PHLPP1O60346 1717 aa18.71■□□□□ 0.59
C4A-244ENST00000460060 JCADQ9P266 1359 aa18.7■□□□□ 0.58
C4A-244ENST00000460060 PPP1R15AO75807 674 aaPredicted RBP18.7■□□□□ 0.58
C4A-244ENST00000460060 MPHOSPH9Q99550 1183 aa18.7■□□□□ 0.58
C4A-244ENST00000460060 NCOA3Q9Y6Q9 1424 aa18.68■□□□□ 0.58
C4A-244ENST00000460060 TMEM131LA2VDJ0 1609 aa18.68■□□□□ 0.58
C4A-244ENST00000460060 SLC4A1APQ9BWU0 796 aaKnown RBP18.68■□□□□ 0.58
C4A-244ENST00000460060 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.67■□□□□ 0.58
C4A-244ENST00000460060 UNC13BO14795 1591 aa18.66■□□□□ 0.58
C4A-244ENST00000460060 CHGAP10645 457 aaKnown RBP18.65■□□□□ 0.58
C4A-244ENST00000460060 ADAMTS13Q76LX8 1427 aa18.64■□□□□ 0.57
C4A-244ENST00000460060 COL16A1Q07092 1604 aaPredicted RBP18.63■□□□□ 0.57
C4A-244ENST00000460060 NUTM2DQ5VT03 806 aaPredicted RBP18.63■□□□□ 0.57
C4A-244ENST00000460060 C19orf44Q9H6X5 657 aa18.63■□□□□ 0.57
C4A-244ENST00000460060 CLSPNQ9HAW4 1339 aa18.63■□□□□ 0.57
C4A-244ENST00000460060 C14orf37Q86TY3 774 aa18.62■□□□□ 0.57
C4A-244ENST00000460060 CADPS2Q86UW7 1296 aa18.62■□□□□ 0.57
C4A-244ENST00000460060 SPATA31A6Q5VVP1 1343 aa18.62■□□□□ 0.57
C4A-244ENST00000460060 PIK3R4Q99570 1358 aa18.61■□□□□ 0.57
C4A-244ENST00000460060 SETD1AO15047 1707 aaKnown RBP18.6■□□□□ 0.57
C4A-244ENST00000460060 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.6■□□□□ 0.57
C4A-244ENST00000460060 E9PCH4 1651 aa18.6■□□□□ 0.57
C4A-244ENST00000460060 ATF3P18847 181 aa18.59■□□□□ 0.57
C4A-244ENST00000460060 LRP6O75581 1613 aa18.59■□□□□ 0.57
C4A-244ENST00000460060 DIP2AQ14689 1571 aa18.58■□□□□ 0.56
C4A-244ENST00000460060 AHDC1Q5TGY3 1603 aaPredicted RBP18.57■□□□□ 0.56
C4A-244ENST00000460060 IQGAP3Q86VI3 1631 aa18.57■□□□□ 0.56
C4A-244ENST00000460060 ZNF772Q68DY9 489 aaPredicted RBP18.57■□□□□ 0.56
C4A-244ENST00000460060 AMOTL2Q9Y2J4 779 aa18.57■□□□□ 0.56
C4A-244ENST00000460060 FOXD1Q16676 465 aa18.56■□□□□ 0.56
C4A-244ENST00000460060 MEX3CQ5U5Q3 659 aaKnown RBP18.56■□□□□ 0.56
C4A-244ENST00000460060 PTPRUQ92729 1446 aa18.55■□□□□ 0.56
C4A-244ENST00000460060 SHPRHQ149N8 1683 aa18.54■□□□□ 0.56
C4A-244ENST00000460060 BRINP3Q76B58 766 aa18.53■□□□□ 0.56
C4A-244ENST00000460060 UPF1Q92900 1129 aaKnown RBP eCLIP18.53■□□□□ 0.56
C4A-244ENST00000460060 TRPM2O94759 1503 aa18.53■□□□□ 0.56
C4A-244ENST00000460060 ANKRD30BQ9BXX2 1392 aa18.52■□□□□ 0.55
C4A-244ENST00000460060 ZEB1P37275 1124 aaPredicted RBP18.5■□□□□ 0.55
C4A-244ENST00000460060 RXRBP28702 533 aa18.49■□□□□ 0.55
C4A-244ENST00000460060 SIN3AQ96ST3 1273 aa18.49■□□□□ 0.55
C4A-244ENST00000460060 DCCP43146 1447 aa18.49■□□□□ 0.55
C4A-244ENST00000460060 NUTM2BA6NNL0 878 aaPredicted RBP18.48■□□□□ 0.55
C4A-244ENST00000460060 NUTM2EB1AL46 878 aaPredicted RBP18.48■□□□□ 0.55
C4A-244ENST00000460060 NUTM2AQ8IVF1 878 aaPredicted RBP18.48■□□□□ 0.55
C4A-244ENST00000460060 NRXN3Q9Y4C0 1643 aa18.46■□□□□ 0.55
C4A-244ENST00000460060 NEUROD1Q13562 356 aa18.46■□□□□ 0.55
C4A-244ENST00000460060 XRN1Q8IZH2 1706 aaKnown RBP18.46■□□□□ 0.55
C4A-244ENST00000460060 MST1RQ04912 1400 aa18.45■□□□□ 0.54
C4A-244ENST00000460060 SETBP1Q9Y6X0 1596 aa18.45■□□□□ 0.54
C4A-244ENST00000460060 ASXL1Q8IXJ9 1541 aa18.44■□□□□ 0.54
C4A-244ENST00000460060 LRRC59Q96AG4 307 aaKnown RBP18.44■□□□□ 0.54
C4A-244ENST00000460060 METP08581 1390 aa18.43■□□□□ 0.54
C4A-244ENST00000460060 ZNF326Q5BKZ1 582 aaKnown RBP18.43■□□□□ 0.54
C4A-244ENST00000460060 CDK12Q9NYV4 1490 aaPredicted RBP18.43■□□□□ 0.54
C4A-244ENST00000460060 AFF2P51816 1311 aa18.43■□□□□ 0.54
C4A-244ENST00000460060 NHSL1Q5SYE7 1610 aa18.41■□□□□ 0.54
C4A-244ENST00000460060 SPHKAPQ2M3C7 1700 aa18.41■□□□□ 0.54
C4A-244ENST00000460060 DDX17Q92841 729 aaKnown RBP18.4■□□□□ 0.54
C4A-244ENST00000460060 TIMELESSQ9UNS1 1208 aa18.4■□□□□ 0.54
C4A-244ENST00000460060 CCDC144AA2RUR9 1427 aa18.39■□□□□ 0.53
C4A-244ENST00000460060 ADGRL3Q9HAR2 1447 aa18.39■□□□□ 0.53
C4A-244ENST00000460060 QTRT2Q9H974 415 aaKnown RBP18.38■□□□□ 0.53
C4A-244ENST00000460060 PNPLA6Q8IY17 1366 aa18.37■□□□□ 0.53
C4A-244ENST00000460060 RBM6P78332 1123 aaKnown RBP18.36■□□□□ 0.53
C4A-244ENST00000460060 C8orf37Q96NL8 207 aa18.36■□□□□ 0.53
C4A-244ENST00000460060 TONSLQ96HA7 1378 aa18.35■□□□□ 0.53
C4A-244ENST00000460060 NEXMIFQ5QGS0 1516 aa18.34■□□□□ 0.53
C4A-244ENST00000460060 NALCNQ8IZF0 1738 aa18.33■□□□□ 0.52
C4A-244ENST00000460060 CLTCL1P53675 1640 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms