RNA–Protein interactions for RNA: ENST00000456224.7

SCN11A-203, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-203ENST00000456224 CHMP4AQ9BY43 222 aa6.36□□□□□ -1.39
SCN11A-203ENST00000456224 TAOK2Q9UL54 1235 aa6.36□□□□□ -1.39
SCN11A-203ENST00000456224 CENPJQ9HC77 1338 aaPredicted RBP6.36□□□□□ -1.39
SCN11A-203ENST00000456224 WDR7Q9Y4E6 1490 aa6.36□□□□□ -1.39
SCN11A-203ENST00000456224 MAGI3Q5TCQ9 1506 aa6.36□□□□□ -1.39
SCN11A-203ENST00000456224 PREX2Q70Z35 1606 aa6.36□□□□□ -1.39
SCN11A-203ENST00000456224 VSIG10Q8N0Z9 540 aa6.36□□□□□ -1.39
SCN11A-203ENST00000456224 NBPF8Q3BBV2 869 aa6.35□□□□□ -1.39
SCN11A-203ENST00000456224 RWDD1Q9H446 243 aaPredicted RBP6.35□□□□□ -1.39
SCN11A-203ENST00000456224 UHRF1BP1LA0JNW5 1464 aa6.35□□□□□ -1.39
SCN11A-203ENST00000456224 KDM5DQ9BY66 1539 aa6.35□□□□□ -1.39
SCN11A-203ENST00000456224 PTMSP20962 102 aa6.35□□□□□ -1.39
SCN11A-203ENST00000456224 PLCB2Q00722 1185 aa6.35□□□□□ -1.39
SCN11A-203ENST00000456224 CENPQQ7L2Z9 268 aaPredicted RBP6.35□□□□□ -1.39
SCN11A-203ENST00000456224 C14orf37Q86TY3 774 aa6.35□□□□□ -1.39
SCN11A-203ENST00000456224 FANCIQ9NVI1 1328 aa6.35□□□□□ -1.39
SCN11A-203ENST00000456224 FANCAO15360 1455 aa6.35□□□□□ -1.39
SCN11A-203ENST00000456224 SCAF11Q99590 1463 aaKnown RBP6.35□□□□□ -1.39
SCN11A-203ENST00000456224 U2SURPO15042 1029 aaKnown RBP6.34□□□□□ -1.39
SCN11A-203ENST00000456224 PZPP20742 1482 aa6.34□□□□□ -1.39
SCN11A-203ENST00000456224 HOMEZQ8IX15 550 aa6.33□□□□□ -1.4
SCN11A-203ENST00000456224 EID1Q9Y6B2 187 aa6.33□□□□□ -1.4
SCN11A-203ENST00000456224 ZNF518AQ6AHZ1 1483 aa6.33□□□□□ -1.4
SCN11A-203ENST00000456224 SHROOM2Q13796 1616 aa6.33□□□□□ -1.4
SCN11A-203ENST00000456224 GOLGA6L22H0YM25 854 aa6.33□□□□□ -1.4
SCN11A-203ENST00000456224 ABCC10Q5T3U5 1492 aa6.33□□□□□ -1.4
SCN11A-203ENST00000456224 FRAT1Q92837 279 aaPredicted RBP6.33□□□□□ -1.4
SCN11A-203ENST00000456224 PRAG1Q86YV5 1406 aa6.32□□□□□ -1.4
SCN11A-203ENST00000456224 RUNDC1Q96C34 613 aa6.32□□□□□ -1.4
SCN11A-203ENST00000456224 DHX29Q7Z478 1369 aaKnown RBP6.32□□□□□ -1.4
SCN11A-203ENST00000456224 SAMD1Q6SPF0 538 aaPredicted RBP6.32□□□□□ -1.4
SCN11A-203ENST00000456224 PLXNC1O60486 1568 aa6.32□□□□□ -1.4
SCN11A-203ENST00000456224 KDM5BQ9UGL1 1544 aa6.32□□□□□ -1.4
SCN11A-203ENST00000456224 CD109Q6YHK3 1445 aa6.32□□□□□ -1.4
SCN11A-203ENST00000456224 U2AF1L5P0DN76 240 aaPredicted RBP6.32□□□□□ -1.4
SCN11A-203ENST00000456224 TNNT2P45379 298 aaPredicted RBP6.32□□□□□ -1.4
SCN11A-203ENST00000456224 U2AF1Q01081 240 aaKnown RBP eCLIP6.32□□□□□ -1.4
SCN11A-203ENST00000456224 IPO9Q96P70 1041 aaKnown RBP6.32□□□□□ -1.4
SCN11A-203ENST00000456224 CHD1O14646 1710 aa6.31□□□□□ -1.4
SCN11A-203ENST00000456224 NSD2O96028 1365 aa6.31□□□□□ -1.4
SCN11A-203ENST00000456224 INSRP06213 1382 aa6.31□□□□□ -1.4
SCN11A-203ENST00000456224 NEUROD2Q15784 382 aa6.31□□□□□ -1.4
SCN11A-203ENST00000456224 SLC52A1Q9NWF4 448 aa6.31□□□□□ -1.4
SCN11A-203ENST00000456224 STK26Q9P289 416 aa6.31□□□□□ -1.4
SCN11A-203ENST00000456224 TRAK1Q9UPV9 953 aa6.31□□□□□ -1.4
SCN11A-203ENST00000456224 PAXIP1Q6ZW49 1069 aaPredicted RBP6.3□□□□□ -1.4
SCN11A-203ENST00000456224 RTF1Q92541 710 aaKnown RBP6.3□□□□□ -1.4
SCN11A-203ENST00000456224 DENND4BO75064 1496 aaPredicted RBP6.3□□□□□ -1.4
SCN11A-203ENST00000456224 PPP2R1AP30153 589 aa6.3□□□□□ -1.4
SCN11A-203ENST00000456224 ARAP3Q8WWN8 1544 aa6.3□□□□□ -1.4
SCN11A-203ENST00000456224 CT47B1P0C2W7 299 aaPredicted RBP6.3□□□□□ -1.4
SCN11A-203ENST00000456224 LAS1LQ9Y4W2 734 aaKnown RBP6.3□□□□□ -1.4
SCN11A-203ENST00000456224 ATP7AQ04656 1500 aa6.29□□□□□ -1.4
SCN11A-203ENST00000456224 SAMD9LQ8IVG5 1584 aa6.29□□□□□ -1.4
SCN11A-203ENST00000456224 ATAD2Q6PL18 1390 aa6.29□□□□□ -1.4
SCN11A-203ENST00000456224 HSCBQ8IWL3 235 aa6.29□□□□□ -1.4
SCN11A-203ENST00000456224 AFAP1Q8N556 730 aa6.29□□□□□ -1.4
SCN11A-203ENST00000456224 PNISRQ8TF01 805 aaKnown RBP6.29□□□□□ -1.4
SCN11A-203ENST00000456224 LRRIQ1Q96JM4 1722 aa6.28□□□□□ -1.4
SCN11A-203ENST00000456224 ZCCHC11Q5TAX3 1644 aaKnown RBP6.28□□□□□ -1.4
SCN11A-203ENST00000456224 PLCD3Q8N3E9 789 aa6.28□□□□□ -1.4
SCN11A-203ENST00000456224 USP35Q9P2H5 1018 aa6.28□□□□□ -1.4
SCN11A-203ENST00000456224 CDC42BPAQ5VT25 1732 aa6.28□□□□□ -1.4
SCN11A-203ENST00000456224 ASXL1Q8IXJ9 1541 aa6.28□□□□□ -1.4
SCN11A-203ENST00000456224 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.28□□□□□ -1.4
SCN11A-203ENST00000456224 DNAJC5BQ9UF47 199 aa6.28□□□□□ -1.4
SCN11A-203ENST00000456224 ASXL2Q76L83 1435 aa6.28□□□□□ -1.4
SCN11A-203ENST00000456224 RGS3P49796 1198 aa6.28□□□□□ -1.4
SCN11A-203ENST00000456224 UNC13BO14795 1591 aa6.28□□□□□ -1.4
SCN11A-203ENST00000456224 IQGAP3Q86VI3 1631 aa6.28□□□□□ -1.4
SCN11A-203ENST00000456224 NCLP19338 710 aaKnown RBP6.28□□□□□ -1.4
SCN11A-203ENST00000456224 FAM161AQ3B820 660 aa6.28□□□□□ -1.4
SCN11A-203ENST00000456224 CCDC146Q8IYE0 955 aa6.28□□□□□ -1.4
SCN11A-203ENST00000456224 COG3Q96JB2 828 aa6.28□□□□□ -1.4
SCN11A-203ENST00000456224 KDM5CP41229 1560 aa6.28□□□□□ -1.4
SCN11A-203ENST00000456224 MCCP23508 829 aa6.27□□□□□ -1.4
SCN11A-203ENST00000456224 SMC4Q9NTJ3 1288 aa6.27□□□□□ -1.4
SCN11A-203ENST00000456224 HDAC5Q9UQL6 1122 aa6.27□□□□□ -1.4
SCN11A-203ENST00000456224 A2MP01023 1474 aa6.27□□□□□ -1.41
SCN11A-203ENST00000456224 ZKSCAN2Q63HK3 967 aa6.27□□□□□ -1.41
SCN11A-203ENST00000456224 ITPRIPQ8IWB1 547 aa6.27□□□□□ -1.41
SCN11A-203ENST00000456224 COL17A1Q9UMD9 1497 aaPredicted RBP6.27□□□□□ -1.41
SCN11A-203ENST00000456224 L1TD1Q5T7N2 865 aaKnown RBP6.27□□□□□ -1.41
SCN11A-203ENST00000456224 POGZQ7Z3K3 1410 aa6.27□□□□□ -1.41
SCN11A-203ENST00000456224 DIAPH1O60610 1272 aaKnown RBP6.27□□□□□ -1.41
SCN11A-203ENST00000456224 SAFB2Q14151 953 aaKnown RBP eCLIP6.27□□□□□ -1.41
SCN11A-203ENST00000456224 MLECQ14165 292 aa6.27□□□□□ -1.41
SCN11A-203ENST00000456224 ABCC1P33527 1531 aa6.26□□□□□ -1.41
SCN11A-203ENST00000456224 WDR63Q8IWG1 891 aa6.26□□□□□ -1.41
SCN11A-203ENST00000456224 CRBNQ96SW2 442 aa6.26□□□□□ -1.41
SCN11A-203ENST00000456224 KDM5AP29375 1690 aaKnown RBP6.26□□□□□ -1.41
SCN11A-203ENST00000456224 FAM69CQ0P6D2 419 aa6.26□□□□□ -1.41
SCN11A-203ENST00000456224 NBPF1Q3BBV0 1214 aa6.26□□□□□ -1.41
SCN11A-203ENST00000456224 DDX19BQ9UMR2 479 aa6.26□□□□□ -1.41
SCN11A-203ENST00000456224 KIF16BQ96L93 1317 aa6.26□□□□□ -1.41
SCN11A-203ENST00000456224 HMMRO75330 724 aa6.26□□□□□ -1.41
SCN11A-203ENST00000456224 HSP90AB1P08238 724 aaKnown RBP6.26□□□□□ -1.41
SCN11A-203ENST00000456224 PUS7Q96PZ0 661 aaKnown RBP6.26□□□□□ -1.41
SCN11A-203ENST00000456224 TRPM2O94759 1503 aa6.26□□□□□ -1.41
SCN11A-203ENST00000456224 EXOC6Q8TAG9 804 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms