RNA–Protein interactions for RNA: ENST00000455013.2

C1DP3-201, Transcript of C1D nuclear receptor corepressor pseudogene 3, humanhuman

BASIC

Gene C1DP3, Length 423 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1DP3-201ENST00000455013 MARVELD3Q96A59 401 aa10.56□□□□□ -0.72
C1DP3-201ENST00000455013 PSDA5PKW4 1024 aaPredicted RBP10.55□□□□□ -0.72
C1DP3-201ENST00000455013 CCDC97Q96F63 343 aaPredicted RBP10.55□□□□□ -0.72
C1DP3-201ENST00000455013 EYA1Q99502 592 aa10.55□□□□□ -0.72
C1DP3-201ENST00000455013 ATP1B4Q9UN42 357 aaPredicted RBP10.55□□□□□ -0.72
C1DP3-201ENST00000455013 LHX6Q9UPM6 363 aa10.55□□□□□ -0.72
C1DP3-201ENST00000455013 SPTLC1O15269 473 aa10.54□□□□□ -0.72
C1DP3-201ENST00000455013 SPIRE2Q8WWL2 714 aa10.54□□□□□ -0.72
C1DP3-201ENST00000455013 LIMD1Q9UGP4 676 aa10.54□□□□□ -0.72
C1DP3-201ENST00000455013 RCCD1A6NED2 376 aa10.53□□□□□ -0.72
C1DP3-201ENST00000455013 HRCP23327 699 aa10.53□□□□□ -0.72
C1DP3-201ENST00000455013 RIC3Q7Z5B4 369 aa10.53□□□□□ -0.72
C1DP3-201ENST00000455013 BCL2L12Q9HB09 334 aa10.53□□□□□ -0.72
C1DP3-201ENST00000455013 PLSCR2Q9NRY7 297 aa10.52□□□□□ -0.73
C1DP3-201ENST00000455013 ZNF777Q9ULD5 760 aaPredicted RBP10.52□□□□□ -0.73
C1DP3-201ENST00000455013 PPP1R3GB7ZBB8 358 aa10.51□□□□□ -0.73
C1DP3-201ENST00000455013 DNAJB2P25686 324 aa10.51□□□□□ -0.73
C1DP3-201ENST00000455013 PPP4R3BQ5MIZ7 849 aa10.51□□□□□ -0.73
C1DP3-201ENST00000455013 RSBN1LQ6PCB5 846 aaPredicted RBP10.51□□□□□ -0.73
C1DP3-201ENST00000455013 SNRKQ9NRH2 765 aa10.51□□□□□ -0.73
C1DP3-201ENST00000455013 FAM198AQ9UFP1 575 aa10.51□□□□□ -0.73
C1DP3-201ENST00000455013 ERBB3P21860 1342 aa10.51□□□□□ -0.73
C1DP3-201ENST00000455013 NBPF26B4DH59 902 aa10.5□□□□□ -0.73
C1DP3-201ENST00000455013 MTMR14Q8NCE2 650 aa10.49□□□□□ -0.73
C1DP3-201ENST00000455013 FAM205CA6NFA0 338 aa10.48□□□□□ -0.73
C1DP3-201ENST00000455013 VARS2Q5ST30 1063 aaKnown RBP10.48□□□□□ -0.73
C1DP3-201ENST00000455013 FBXO31Q5XUX0 539 aaPredicted RBP10.48□□□□□ -0.73
C1DP3-201ENST00000455013 WWC1Q8IX03 1113 aa10.48□□□□□ -0.73
C1DP3-201ENST00000455013 HS3ST6Q96QI5 342 aa10.48□□□□□ -0.73
C1DP3-201ENST00000455013 TMEM134Q9H6X4 195 aa10.48□□□□□ -0.73
C1DP3-201ENST00000455013 POTEB3A0JP26 581 aa10.47□□□□□ -0.73
C1DP3-201ENST00000455013 ZBTB7CA1YPR0 619 aa10.47□□□□□ -0.73
C1DP3-201ENST00000455013 COL9A1P20849 921 aa10.47□□□□□ -0.73
C1DP3-201ENST00000455013 POTEBQ6S5H4 581 aa10.47□□□□□ -0.73
C1DP3-201ENST00000455013 NUTM1Q86Y26 1132 aa10.47□□□□□ -0.73
C1DP3-201ENST00000455013 TRAIPQ9BWF2 469 aa10.47□□□□□ -0.73
C1DP3-201ENST00000455013 POTEMA6NI47 508 aa10.46□□□□□ -0.73
C1DP3-201ENST00000455013 POTEGQ6S5H5 508 aa10.46□□□□□ -0.73
C1DP3-201ENST00000455013 PRM3Q9NNZ6 103 aa10.46□□□□□ -0.73
C1DP3-201ENST00000455013 TSKSQ9UJT2 592 aa10.46□□□□□ -0.73
C1DP3-201ENST00000455013 ZNF330Q9Y3S2 320 aaPredicted RBP10.46□□□□□ -0.73
C1DP3-201ENST00000455013 LILRB3O75022 631 aa10.45□□□□□ -0.74
C1DP3-201ENST00000455013 PTPREP23469 700 aa10.45□□□□□ -0.74
C1DP3-201ENST00000455013 PRPF38BQ5VTL8 546 aaKnown RBP10.45□□□□□ -0.74
C1DP3-201ENST00000455013 TRIM6-TRIM34B2RNG4 842 aa10.44□□□□□ -0.74
C1DP3-201ENST00000455013 ZNF687Q8N1G0 1237 aa10.44□□□□□ -0.74
C1DP3-201ENST00000455013 MOXD2PA6NHM9 499 aa10.43□□□□□ -0.74
C1DP3-201ENST00000455013 USP46P62068 366 aa10.43□□□□□ -0.74
C1DP3-201ENST00000455013 NUDT18Q6ZVK8 323 aa10.43□□□□□ -0.74
C1DP3-201ENST00000455013 DDX11L8A8MPP1 907 aa10.42□□□□□ -0.74
C1DP3-201ENST00000455013 PACS2Q86VP3 889 aa10.42□□□□□ -0.74
C1DP3-201ENST00000455013 TATDN2Q93075 761 aa10.42□□□□□ -0.74
C1DP3-201ENST00000455013 GDPD2Q9HCC8 539 aa10.41□□□□□ -0.74
C1DP3-201ENST00000455013 PPP1R15AO75807 674 aaPredicted RBP10.4□□□□□ -0.74
C1DP3-201ENST00000455013 PBX2P40425 430 aa10.4□□□□□ -0.74
C1DP3-201ENST00000455013 QPCTQ16769 361 aa10.4□□□□□ -0.74
C1DP3-201ENST00000455013 KCTD17Q8N5Z5 321 aa10.4□□□□□ -0.74
C1DP3-201ENST00000455013 PNMA3Q9UL41 463 aa10.4□□□□□ -0.74
C1DP3-201ENST00000455013 RANGAP1P46060 587 aaPredicted RBP10.39□□□□□ -0.75
C1DP3-201ENST00000455013 C3orf80F5H4A9 247 aa10.38□□□□□ -0.75
C1DP3-201ENST00000455013 KDM4AO75164 1064 aa10.38□□□□□ -0.75
C1DP3-201ENST00000455013 USP17L8P0C7I0 530 aa10.38□□□□□ -0.75
C1DP3-201ENST00000455013 NECTIN2Q92692 538 aa10.38□□□□□ -0.75
C1DP3-201ENST00000455013 RSPH4AQ5TD94 716 aa10.37□□□□□ -0.75
C1DP3-201ENST00000455013 ZBTB3Q9H5J0 574 aa10.37□□□□□ -0.75
C1DP3-201ENST00000455013 CCDC9Q9Y3X0 531 aaKnown RBP10.37□□□□□ -0.75
C1DP3-201ENST00000455013 AP1G2O75843 785 aa10.36□□□□□ -0.75
C1DP3-201ENST00000455013 POTEEQ6S8J3 1075 aa10.36□□□□□ -0.75
C1DP3-201ENST00000455013 HOXA2O43364 376 aa10.35□□□□□ -0.75
C1DP3-201ENST00000455013 NDUFV2P19404 249 aa10.35□□□□□ -0.75
C1DP3-201ENST00000455013 GCGRP47871 477 aa10.35□□□□□ -0.75
C1DP3-201ENST00000455013 CSPP1Q1MSJ5 1256 aa10.35□□□□□ -0.75
C1DP3-201ENST00000455013 RTL5Q5HYW3 569 aaPredicted RBP10.35□□□□□ -0.75
C1DP3-201ENST00000455013 RDH13Q8NBN7 331 aa10.35□□□□□ -0.75
C1DP3-201ENST00000455013 PCDH10Q9P2E7 1040 aa10.35□□□□□ -0.75
C1DP3-201ENST00000455013 TBC1D2BQ9UPU7 963 aa10.35□□□□□ -0.75
C1DP3-201ENST00000455013 PCDHB15Q9Y5E8 787 aa10.35□□□□□ -0.75
C1DP3-201ENST00000455013 NDUFB9Q9Y6M9 179 aa10.35□□□□□ -0.75
C1DP3-201ENST00000455013 ARHGAP33O14559 1287 aa10.34□□□□□ -0.75
C1DP3-201ENST00000455013 ABL2P42684 1182 aa10.34□□□□□ -0.75
C1DP3-201ENST00000455013 GLMNQ92990 594 aa10.34□□□□□ -0.75
C1DP3-201ENST00000455013 CALR3Q96L12 384 aaKnown RBP10.34□□□□□ -0.75
C1DP3-201ENST00000455013 NUTM2BA6NNL0 878 aaPredicted RBP10.33□□□□□ -0.76
C1DP3-201ENST00000455013 NUTM2EB1AL46 878 aaPredicted RBP10.33□□□□□ -0.76
C1DP3-201ENST00000455013 PDE4CQ08493 712 aa10.33□□□□□ -0.76
C1DP3-201ENST00000455013 NUTM2DQ5VT03 806 aaPredicted RBP10.33□□□□□ -0.76
C1DP3-201ENST00000455013 NUTM2AQ8IVF1 878 aaPredicted RBP10.33□□□□□ -0.76
C1DP3-201ENST00000455013 CDAN1Q8IWY9 1227 aa10.33□□□□□ -0.76
C1DP3-201ENST00000455013 GJD4Q96KN9 370 aaPredicted RBP10.33□□□□□ -0.76
C1DP3-201ENST00000455013 KCNH8Q96L42 1107 aa10.33□□□□□ -0.76
C1DP3-201ENST00000455013 RETREG2Q8NC44 543 aa10.32□□□□□ -0.76
C1DP3-201ENST00000455013 FDX1P10109 184 aa10.31□□□□□ -0.76
C1DP3-201ENST00000455013 WASHC4Q2M389 1173 aa10.31□□□□□ -0.76
C1DP3-201ENST00000455013 CABLES1Q8TDN4 633 aa10.31□□□□□ -0.76
C1DP3-201ENST00000455013 KCNK17Q96T54 332 aa10.31□□□□□ -0.76
C1DP3-201ENST00000455013 KRTAP3-3Q9BYR6 98 aa10.31□□□□□ -0.76
C1DP3-201ENST00000455013 KRTAP3-2Q9BYR7 98 aa10.31□□□□□ -0.76
C1DP3-201ENST00000455013 POM121CA8CG34 1229 aa10.29□□□□□ -0.76
C1DP3-201ENST00000455013 PROX2Q3B8N5 592 aa10.29□□□□□ -0.76
C1DP3-201ENST00000455013 SLC4A5Q9BY07 1137 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms