RNA–Protein interactions for RNA: ENST00000455013.2

C1DP3-201, Transcript of C1D nuclear receptor corepressor pseudogene 3, humanhuman

BASIC

Gene C1DP3, Length 423 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1DP3-201ENST00000455013 MARVELD3Q96A59 401 aa10.56□□□□□ -0.72
C1DP3-201ENST00000455013 PSDA5PKW4 1024 aaPredicted RBP10.55□□□□□ -0.72
C1DP3-201ENST00000455013 CCDC97Q96F63 343 aaPredicted RBP10.55□□□□□ -0.72
C1DP3-201ENST00000455013 EYA1Q99502 592 aa10.55□□□□□ -0.72
C1DP3-201ENST00000455013 ATP1B4Q9UN42 357 aaPredicted RBP10.55□□□□□ -0.72
C1DP3-201ENST00000455013 LHX6Q9UPM6 363 aa10.55□□□□□ -0.72
C1DP3-201ENST00000455013 SPTLC1O15269 473 aa10.54□□□□□ -0.72
C1DP3-201ENST00000455013 SPIRE2Q8WWL2 714 aa10.54□□□□□ -0.72
C1DP3-201ENST00000455013 LIMD1Q9UGP4 676 aa10.54□□□□□ -0.72
C1DP3-201ENST00000455013 RCCD1A6NED2 376 aa10.53□□□□□ -0.72
C1DP3-201ENST00000455013 HRCP23327 699 aa10.53□□□□□ -0.72
C1DP3-201ENST00000455013 RIC3Q7Z5B4 369 aa10.53□□□□□ -0.72
C1DP3-201ENST00000455013 BCL2L12Q9HB09 334 aa10.53□□□□□ -0.72
C1DP3-201ENST00000455013 PLSCR2Q9NRY7 297 aa10.52□□□□□ -0.73
C1DP3-201ENST00000455013 ZNF777Q9ULD5 760 aaPredicted RBP10.52□□□□□ -0.73
C1DP3-201ENST00000455013 PPP1R3GB7ZBB8 358 aa10.51□□□□□ -0.73
C1DP3-201ENST00000455013 DNAJB2P25686 324 aa10.51□□□□□ -0.73
C1DP3-201ENST00000455013 PPP4R3BQ5MIZ7 849 aa10.51□□□□□ -0.73
C1DP3-201ENST00000455013 RSBN1LQ6PCB5 846 aaPredicted RBP10.51□□□□□ -0.73
C1DP3-201ENST00000455013 SNRKQ9NRH2 765 aa10.51□□□□□ -0.73
C1DP3-201ENST00000455013 FAM198AQ9UFP1 575 aa10.51□□□□□ -0.73
C1DP3-201ENST00000455013 ERBB3P21860 1342 aa10.51□□□□□ -0.73
C1DP3-201ENST00000455013 NBPF26B4DH59 902 aa10.5□□□□□ -0.73
C1DP3-201ENST00000455013 MTMR14Q8NCE2 650 aa10.49□□□□□ -0.73
C1DP3-201ENST00000455013 FAM205CA6NFA0 338 aa10.48□□□□□ -0.73
C1DP3-201ENST00000455013 VARS2Q5ST30 1063 aaKnown RBP10.48□□□□□ -0.73
C1DP3-201ENST00000455013 FBXO31Q5XUX0 539 aaPredicted RBP10.48□□□□□ -0.73
C1DP3-201ENST00000455013 WWC1Q8IX03 1113 aa10.48□□□□□ -0.73
C1DP3-201ENST00000455013 HS3ST6Q96QI5 342 aa10.48□□□□□ -0.73
C1DP3-201ENST00000455013 TMEM134Q9H6X4 195 aa10.48□□□□□ -0.73
C1DP3-201ENST00000455013 POTEB3A0JP26 581 aa10.47□□□□□ -0.73
C1DP3-201ENST00000455013 ZBTB7CA1YPR0 619 aa10.47□□□□□ -0.73
C1DP3-201ENST00000455013 COL9A1P20849 921 aa10.47□□□□□ -0.73
C1DP3-201ENST00000455013 POTEBQ6S5H4 581 aa10.47□□□□□ -0.73
C1DP3-201ENST00000455013 NUTM1Q86Y26 1132 aa10.47□□□□□ -0.73
C1DP3-201ENST00000455013 TRAIPQ9BWF2 469 aa10.47□□□□□ -0.73
C1DP3-201ENST00000455013 POTEMA6NI47 508 aa10.46□□□□□ -0.73
C1DP3-201ENST00000455013 POTEGQ6S5H5 508 aa10.46□□□□□ -0.73
C1DP3-201ENST00000455013 PRM3Q9NNZ6 103 aa10.46□□□□□ -0.73
C1DP3-201ENST00000455013 TSKSQ9UJT2 592 aa10.46□□□□□ -0.73
C1DP3-201ENST00000455013 ZNF330Q9Y3S2 320 aaPredicted RBP10.46□□□□□ -0.73
C1DP3-201ENST00000455013 LILRB3O75022 631 aa10.45□□□□□ -0.74
C1DP3-201ENST00000455013 PTPREP23469 700 aa10.45□□□□□ -0.74
C1DP3-201ENST00000455013 PRPF38BQ5VTL8 546 aaKnown RBP10.45□□□□□ -0.74
C1DP3-201ENST00000455013 TRIM6-TRIM34B2RNG4 842 aa10.44□□□□□ -0.74
C1DP3-201ENST00000455013 ZNF687Q8N1G0 1237 aa10.44□□□□□ -0.74
C1DP3-201ENST00000455013 MOXD2PA6NHM9 499 aa10.43□□□□□ -0.74
C1DP3-201ENST00000455013 USP46P62068 366 aa10.43□□□□□ -0.74
C1DP3-201ENST00000455013 NUDT18Q6ZVK8 323 aa10.43□□□□□ -0.74
C1DP3-201ENST00000455013 DDX11L8A8MPP1 907 aa10.42□□□□□ -0.74
C1DP3-201ENST00000455013 PACS2Q86VP3 889 aa10.42□□□□□ -0.74
C1DP3-201ENST00000455013 TATDN2Q93075 761 aa10.42□□□□□ -0.74
C1DP3-201ENST00000455013 GDPD2Q9HCC8 539 aa10.41□□□□□ -0.74
C1DP3-201ENST00000455013 PPP1R15AO75807 674 aaPredicted RBP10.4□□□□□ -0.74
C1DP3-201ENST00000455013 PBX2P40425 430 aa10.4□□□□□ -0.74
C1DP3-201ENST00000455013 QPCTQ16769 361 aa10.4□□□□□ -0.74
C1DP3-201ENST00000455013 KCTD17Q8N5Z5 321 aa10.4□□□□□ -0.74
C1DP3-201ENST00000455013 PNMA3Q9UL41 463 aa10.4□□□□□ -0.74
C1DP3-201ENST00000455013 RANGAP1P46060 587 aaPredicted RBP10.39□□□□□ -0.75
C1DP3-201ENST00000455013 C3orf80F5H4A9 247 aa10.38□□□□□ -0.75
C1DP3-201ENST00000455013 KDM4AO75164 1064 aa10.38□□□□□ -0.75
C1DP3-201ENST00000455013 USP17L8P0C7I0 530 aa10.38□□□□□ -0.75
C1DP3-201ENST00000455013 NECTIN2Q92692 538 aa10.38□□□□□ -0.75
C1DP3-201ENST00000455013 RSPH4AQ5TD94 716 aa10.37□□□□□ -0.75
C1DP3-201ENST00000455013 ZBTB3Q9H5J0 574 aa10.37□□□□□ -0.75
C1DP3-201ENST00000455013 CCDC9Q9Y3X0 531 aaKnown RBP10.37□□□□□ -0.75
C1DP3-201ENST00000455013 AP1G2O75843 785 aa10.36□□□□□ -0.75
C1DP3-201ENST00000455013 POTEEQ6S8J3 1075 aa10.36□□□□□ -0.75
C1DP3-201ENST00000455013 HOXA2O43364 376 aa10.35□□□□□ -0.75
C1DP3-201ENST00000455013 NDUFV2P19404 249 aa10.35□□□□□ -0.75
C1DP3-201ENST00000455013 GCGRP47871 477 aa10.35□□□□□ -0.75
C1DP3-201ENST00000455013 CSPP1Q1MSJ5 1256 aa10.35□□□□□ -0.75
C1DP3-201ENST00000455013 RTL5Q5HYW3 569 aaPredicted RBP10.35□□□□□ -0.75
C1DP3-201ENST00000455013 RDH13Q8NBN7 331 aa10.35□□□□□ -0.75
C1DP3-201ENST00000455013 PCDH10Q9P2E7 1040 aa10.35□□□□□ -0.75
C1DP3-201ENST00000455013 TBC1D2BQ9UPU7 963 aa10.35□□□□□ -0.75
C1DP3-201ENST00000455013 PCDHB15Q9Y5E8 787 aa10.35□□□□□ -0.75
C1DP3-201ENST00000455013 NDUFB9Q9Y6M9 179 aa10.35□□□□□ -0.75
C1DP3-201ENST00000455013 ARHGAP33O14559 1287 aa10.34□□□□□ -0.75
C1DP3-201ENST00000455013 ABL2P42684 1182 aa10.34□□□□□ -0.75
C1DP3-201ENST00000455013 GLMNQ92990 594 aa10.34□□□□□ -0.75
C1DP3-201ENST00000455013 CALR3Q96L12 384 aaKnown RBP10.34□□□□□ -0.75
C1DP3-201ENST00000455013 NUTM2BA6NNL0 878 aaPredicted RBP10.33□□□□□ -0.76
C1DP3-201ENST00000455013 NUTM2EB1AL46 878 aaPredicted RBP10.33□□□□□ -0.76
C1DP3-201ENST00000455013 PDE4CQ08493 712 aa10.33□□□□□ -0.76
C1DP3-201ENST00000455013 NUTM2DQ5VT03 806 aaPredicted RBP10.33□□□□□ -0.76
C1DP3-201ENST00000455013 NUTM2AQ8IVF1 878 aaPredicted RBP10.33□□□□□ -0.76
C1DP3-201ENST00000455013 CDAN1Q8IWY9 1227 aa10.33□□□□□ -0.76
C1DP3-201ENST00000455013 GJD4Q96KN9 370 aaPredicted RBP10.33□□□□□ -0.76
C1DP3-201ENST00000455013 KCNH8Q96L42 1107 aa10.33□□□□□ -0.76
C1DP3-201ENST00000455013 RETREG2Q8NC44 543 aa10.32□□□□□ -0.76
C1DP3-201ENST00000455013 FDX1P10109 184 aa10.31□□□□□ -0.76
C1DP3-201ENST00000455013 WASHC4Q2M389 1173 aa10.31□□□□□ -0.76
C1DP3-201ENST00000455013 CABLES1Q8TDN4 633 aa10.31□□□□□ -0.76
C1DP3-201ENST00000455013 KCNK17Q96T54 332 aa10.31□□□□□ -0.76
C1DP3-201ENST00000455013 KRTAP3-3Q9BYR6 98 aa10.31□□□□□ -0.76
C1DP3-201ENST00000455013 KRTAP3-2Q9BYR7 98 aa10.31□□□□□ -0.76
C1DP3-201ENST00000455013 POM121CA8CG34 1229 aa10.29□□□□□ -0.76
C1DP3-201ENST00000455013 PROX2Q3B8N5 592 aa10.29□□□□□ -0.76
C1DP3-201ENST00000455013 SLC4A5Q9BY07 1137 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms