RNA–Protein interactions for RNA: ENST00000454540.5

BBX-216, Transcript of BBX, HMG-box containing, humanhuman

TSL 5

Gene BBX, Length 392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-216ENST00000454540 PTPN23Q9H3S7 1636 aa32.04■■■□□ 2.72
BBX-216ENST00000454540 UPF1Q92900 1129 aaKnown RBP eCLIP32.03■■■□□ 2.72
BBX-216ENST00000454540 CHIC2Q9UKJ5 165 aa32.03■■■□□ 2.72
BBX-216ENST00000454540 COL16A1Q07092 1604 aaPredicted RBP32.03■■■□□ 2.72
BBX-216ENST00000454540 LRP6O75581 1613 aa32.01■■■□□ 2.72
BBX-216ENST00000454540 ANKRD30AQ9BXX3 1397 aa32.01■■■□□ 2.71
BBX-216ENST00000454540 PLEKHG1Q9ULL1 1385 aa32■■■□□ 2.71
BBX-216ENST00000454540 SPATA31A6Q5VVP1 1343 aa32■■■□□ 2.71
BBX-216ENST00000454540 ZFYVE9O95405 1425 aa31.99■■■□□ 2.71
BBX-216ENST00000454540 CHD2O14647 1828 aaKnown RBP31.98■■■□□ 2.71
BBX-216ENST00000454540 MEX3CQ5U5Q3 659 aaKnown RBP31.97■■■□□ 2.71
BBX-216ENST00000454540 ZNF772Q68DY9 489 aaPredicted RBP31.97■■■□□ 2.71
BBX-216ENST00000454540 TRIM52Q96A61 297 aa31.97■■■□□ 2.71
BBX-216ENST00000454540 FGD6Q6ZV73 1430 aa31.97■■■□□ 2.71
BBX-216ENST00000454540 LOC105371045A0A1W2PR82 267 aa31.96■■■□□ 2.71
BBX-216ENST00000454540 NCOA3Q9Y6Q9 1424 aa31.94■■■□□ 2.7
BBX-216ENST00000454540 PPP1R15AO75807 674 aaPredicted RBP31.94■■■□□ 2.7
BBX-216ENST00000454540 TBX22Q9Y458 520 aa31.94■■■□□ 2.7
BBX-216ENST00000454540 RIMS2Q9UQ26 1411 aa31.93■■■□□ 2.7
BBX-216ENST00000454540 HDGFP51858 240 aaKnown RBP31.92■■■□□ 2.7
BBX-216ENST00000454540 C14orf37Q86TY3 774 aa31.91■■■□□ 2.7
BBX-216ENST00000454540 RPRD2Q5VT52 1461 aaKnown RBP31.88■■■□□ 2.69
BBX-216ENST00000454540 MYO5BQ9ULV0 1848 aa31.88■■■□□ 2.69
BBX-216ENST00000454540 CADPS2Q86UW7 1296 aa31.87■■■□□ 2.69
BBX-216ENST00000454540 AHDC1Q5TGY3 1603 aaPredicted RBP31.86■■■□□ 2.69
BBX-216ENST00000454540 C19orf44Q9H6X5 657 aa31.86■■■□□ 2.69
BBX-216ENST00000454540 RXRBP28702 533 aa31.85■■■□□ 2.69
BBX-216ENST00000454540 ATF3P18847 181 aa31.84■■■□□ 2.69
BBX-216ENST00000454540 TMEM131LA2VDJ0 1609 aa31.84■■■□□ 2.69
BBX-216ENST00000454540 SHPRHQ149N8 1683 aa31.83■■■□□ 2.69
BBX-216ENST00000454540 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.83■■■□□ 2.69
BBX-216ENST00000454540 ADAMTS13Q76LX8 1427 aa31.83■■■□□ 2.69
BBX-216ENST00000454540 GCC2Q8IWJ2 1684 aa31.83■■■□□ 2.69
BBX-216ENST00000454540 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.82■■■□□ 2.68
BBX-216ENST00000454540 ADGRL2O95490 1459 aa31.8■■■□□ 2.68
BBX-216ENST00000454540 APLP2Q06481 763 aa31.8■■■□□ 2.68
BBX-216ENST00000454540 NUTM2DQ5VT03 806 aaPredicted RBP31.8■■■□□ 2.68
BBX-216ENST00000454540 NUTM2BA6NNL0 878 aaPredicted RBP31.79■■■□□ 2.68
BBX-216ENST00000454540 NUTM2EB1AL46 878 aaPredicted RBP31.79■■■□□ 2.68
BBX-216ENST00000454540 CHGAP10645 457 aaKnown RBP31.79■■■□□ 2.68
BBX-216ENST00000454540 NUTM2AQ8IVF1 878 aaPredicted RBP31.79■■■□□ 2.68
BBX-216ENST00000454540 BRINP3Q76B58 766 aa31.78■■■□□ 2.68
BBX-216ENST00000454540 PIK3R4Q99570 1358 aa31.77■■■□□ 2.68
BBX-216ENST00000454540 ANKRD50Q9ULJ7 1429 aa31.76■■■□□ 2.68
BBX-216ENST00000454540 CDK12Q9NYV4 1490 aaPredicted RBP31.76■■■□□ 2.67
BBX-216ENST00000454540 DIP2AQ14689 1571 aa31.75■■■□□ 2.67
BBX-216ENST00000454540 AFF2P51816 1311 aa31.73■■■□□ 2.67
BBX-216ENST00000454540 AMOTL2Q9Y2J4 779 aa31.72■■■□□ 2.67
BBX-216ENST00000454540 PTPRUQ92729 1446 aa31.7■■■□□ 2.67
BBX-216ENST00000454540 SETD5Q9C0A6 1442 aa31.66■■■□□ 2.66
BBX-216ENST00000454540 FAM50AQ14320 339 aaKnown RBP31.65■■■□□ 2.66
BBX-216ENST00000454540 TRPM2O94759 1503 aa31.65■■■□□ 2.66
BBX-216ENST00000454540 ASXL1Q8IXJ9 1541 aa31.64■■■□□ 2.66
BBX-216ENST00000454540 DCCP43146 1447 aa31.63■■■□□ 2.65
BBX-216ENST00000454540 LRRC59Q96AG4 307 aaKnown RBP31.6■■■□□ 2.65
BBX-216ENST00000454540 QTRT2Q9H974 415 aaKnown RBP31.6■■■□□ 2.65
BBX-216ENST00000454540 RGS12O14924 1447 aa31.59■■■□□ 2.65
BBX-216ENST00000454540 MST1RQ04912 1400 aa31.59■■■□□ 2.65
BBX-216ENST00000454540 C8orf37Q96NL8 207 aa31.59■■■□□ 2.65
BBX-216ENST00000454540 E9PCH4 1651 aa31.59■■■□□ 2.65
BBX-216ENST00000454540 RBM6P78332 1123 aaKnown RBP31.58■■■□□ 2.65
BBX-216ENST00000454540 UNC13BO14795 1591 aa31.58■■■□□ 2.65
BBX-216ENST00000454540 DDX17Q92841 729 aaKnown RBP31.55■■■□□ 2.64
BBX-216ENST00000454540 NHSL1Q5SYE7 1610 aa31.54■■■□□ 2.64
BBX-216ENST00000454540 PNPLA6Q8IY17 1366 aa31.54■■■□□ 2.64
BBX-216ENST00000454540 XRN1Q8IZH2 1706 aaKnown RBP31.52■■■□□ 2.64
BBX-216ENST00000454540 NRXN3Q9Y4C0 1643 aa31.49■■■□□ 2.63
BBX-216ENST00000454540 METP08581 1390 aa31.47■■■□□ 2.63
BBX-216ENST00000454540 IQGAP3Q86VI3 1631 aa31.46■■■□□ 2.63
BBX-216ENST00000454540 NGLY1Q96IV0 654 aa31.46■■■□□ 2.63
BBX-216ENST00000454540 SETBP1Q9Y6X0 1596 aa31.46■■■□□ 2.63
BBX-216ENST00000454540 ADAMTS2O95450 1211 aa31.44■■■□□ 2.62
BBX-216ENST00000454540 ADGRL3Q9HAR2 1447 aa31.43■■■□□ 2.62
BBX-216ENST00000454540 NUP155O75694 1391 aa31.43■■■□□ 2.62
BBX-216ENST00000454540 ROCK1Q13464 1354 aa31.39■■■□□ 2.62
BBX-216ENST00000454540 ATAD2Q6PL18 1390 aa31.39■■■□□ 2.62
BBX-216ENST00000454540 ZNF326Q5BKZ1 582 aaKnown RBP31.38■■■□□ 2.61
BBX-216ENST00000454540 C1orf167Q5SNV9 1468 aa31.35■■■□□ 2.61
BBX-216ENST00000454540 USP21Q9UK80 565 aa31.35■■■□□ 2.61
BBX-216ENST00000454540 NALCNQ8IZF0 1738 aa31.34■■■□□ 2.61
BBX-216ENST00000454540 TRPC5Q9UL62 973 aaPredicted RBP31.32■■■□□ 2.6
BBX-216ENST00000454540 SOS2Q07890 1332 aaPredicted RBP31.31■■■□□ 2.6
BBX-216ENST00000454540 ORAI2Q96SN7 254 aa31.3■■■□□ 2.6
BBX-216ENST00000454540 FNBP4Q8N3X1 1017 aaPredicted RBP31.29■■■□□ 2.6
BBX-216ENST00000454540 ZRANB1Q9UGI0 708 aa31.29■■■□□ 2.6
BBX-216ENST00000454540 LAMC1P11047 1609 aa31.28■■■□□ 2.6
BBX-216ENST00000454540 ATRNO75882 1429 aa31.25■■■□□ 2.59
BBX-216ENST00000454540 PTCH1Q13635 1447 aa31.25■■■□□ 2.59
BBX-216ENST00000454540 SPHKAPQ2M3C7 1700 aa31.25■■■□□ 2.59
BBX-216ENST00000454540 FOXD1Q16676 465 aa31.25■■■□□ 2.59
BBX-216ENST00000454540 SRCAPQ6ZRS2 3230 aa31.25■■■□□ 2.59
BBX-216ENST00000454540 NEXMIFQ5QGS0 1516 aa31.23■■■□□ 2.59
BBX-216ENST00000454540 ROBO2Q9HCK4 1378 aa31.2■■■□□ 2.59
BBX-216ENST00000454540 ITGAEP38570 1179 aa31.19■■■□□ 2.58
BBX-216ENST00000454540 CCDC125Q86Z20 511 aa31.18■■■□□ 2.58
BBX-216ENST00000454540 CLTCL1P53675 1640 aa31.16■■■□□ 2.58
BBX-216ENST00000454540 COL22A1Q8NFW1 1626 aaPredicted RBP31.14■■■□□ 2.58
BBX-216ENST00000454540 BCL9LQ86UU0 1499 aa31.14■■■□□ 2.57
BBX-216ENST00000454540 MYOM2P54296 1465 aa31.13■■■□□ 2.57
BBX-216ENST00000454540 GJD4Q96KN9 370 aaPredicted RBP31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms