RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 LRPPRCP42704 1394 aaKnown RBP27.4■■□□□ 1.98
PDCD2-204ENST00000453163 NPATQ14207 1427 aa27.39■■□□□ 1.98
PDCD2-204ENST00000453163 SENP3-EIF4A1A0A087X0R7 540 aa27.39■■□□□ 1.97
PDCD2-204ENST00000453163 ADGRF5Q8IZF2 1346 aa27.37■■□□□ 1.97
PDCD2-204ENST00000453163 NLRP13Q86W25 1043 aa27.37■■□□□ 1.97
PDCD2-204ENST00000453163 CC2D1BQ5T0F9 858 aaKnown RBP27.36■■□□□ 1.97
PDCD2-204ENST00000453163 ADGRB3O60242 1522 aa27.36■■□□□ 1.97
PDCD2-204ENST00000453163 RICTORQ6R327 1708 aa27.36■■□□□ 1.97
PDCD2-204ENST00000453163 ABCC3O15438 1527 aa27.35■■□□□ 1.97
PDCD2-204ENST00000453163 DIP2CQ9Y2E4 1556 aa27.35■■□□□ 1.97
PDCD2-204ENST00000453163 WASHC2CQ9Y4E1 1318 aa27.34■■□□□ 1.97
PDCD2-204ENST00000453163 CFAP70Q5T0N1 1121 aa27.34■■□□□ 1.97
PDCD2-204ENST00000453163 SMG6Q86US8 1419 aaKnown RBP27.33■■□□□ 1.97
PDCD2-204ENST00000453163 EIF3AQ14152 1382 aaKnown RBP27.32■■□□□ 1.96
PDCD2-204ENST00000453163 CYB5RLQ6IPT4 315 aa27.32■■□□□ 1.96
PDCD2-204ENST00000453163 CAMSAP1Q5T5Y3 1602 aa27.31■■□□□ 1.96
PDCD2-204ENST00000453163 NRXN1Q9ULB1 1477 aa27.3■■□□□ 1.96
PDCD2-204ENST00000453163 SYNMO15061 1565 aa27.3■■□□□ 1.96
PDCD2-204ENST00000453163 MYOM1P52179 1685 aa27.29■■□□□ 1.96
PDCD2-204ENST00000453163 CHGAP10645 457 aaKnown RBP27.29■■□□□ 1.96
PDCD2-204ENST00000453163 NOS1P29475 1434 aa27.29■■□□□ 1.96
PDCD2-204ENST00000453163 SIGLEC1Q9BZZ2 1709 aa27.28■■□□□ 1.96
PDCD2-204ENST00000453163 PPLO60437 1756 aa27.28■■□□□ 1.96
PDCD2-204ENST00000453163 NUDCQ9Y266 331 aa27.27■■□□□ 1.96
PDCD2-204ENST00000453163 KDM5AP29375 1690 aaKnown RBP27.25■■□□□ 1.95
PDCD2-204ENST00000453163 CDCA8Q53HL2 280 aa27.25■■□□□ 1.95
PDCD2-204ENST00000453163 RIMBP3CA6NJZ7 1639 aa27.25■■□□□ 1.95
PDCD2-204ENST00000453163 RIMBP3BA6NNM3 1639 aa27.25■■□□□ 1.95
PDCD2-204ENST00000453163 RIMBP3Q9UFD9 1639 aa27.25■■□□□ 1.95
PDCD2-204ENST00000453163 YEATS2Q9ULM3 1422 aa27.23■■□□□ 1.95
PDCD2-204ENST00000453163 GLI2P10070 1586 aa27.23■■□□□ 1.95
PDCD2-204ENST00000453163 ERICH6BQ5W0A0 696 aa27.22■■□□□ 1.95
PDCD2-204ENST00000453163 KNSTRNQ9Y448 316 aa27.2■■□□□ 1.94
PDCD2-204ENST00000453163 ERVK-7P63135 1459 aa27.2■■□□□ 1.94
PDCD2-204ENST00000453163 MYO3AQ8NEV4 1616 aa27.19■■□□□ 1.94
PDCD2-204ENST00000453163 PIK3C2GO75747 1445 aa27.19■■□□□ 1.94
PDCD2-204ENST00000453163 SETBP1Q9Y6X0 1596 aa27.19■■□□□ 1.94
PDCD2-204ENST00000453163 PIK3C2BO00750 1634 aa27.18■■□□□ 1.94
PDCD2-204ENST00000453163 RBM19Q9Y4C8 960 aaKnown RBP27.17■■□□□ 1.94
PDCD2-204ENST00000453163 ZC3H13Q5T200 1668 aaKnown RBP27.17■■□□□ 1.94
PDCD2-204ENST00000453163 AMER1Q5JTC6 1135 aaPredicted RBP27.16■■□□□ 1.94
PDCD2-204ENST00000453163 PPP4R2Q9NY27 417 aa27.15■■□□□ 1.94
PDCD2-204ENST00000453163 ASXL1Q8IXJ9 1541 aa27.15■■□□□ 1.94
PDCD2-204ENST00000453163 DIP2BQ9P265 1576 aa27.14■■□□□ 1.94
PDCD2-204ENST00000453163 SALL2Q9Y467 1007 aaPredicted RBP27.13■■□□□ 1.93
PDCD2-204ENST00000453163 TSPOAP1O95153 1857 aa27.12■■□□□ 1.93
PDCD2-204ENST00000453163 ADGRB1O14514 1584 aa27.12■■□□□ 1.93
PDCD2-204ENST00000453163 FAM69CQ0P6D2 419 aa27.12■■□□□ 1.93
PDCD2-204ENST00000453163 BLMP54132 1417 aaPredicted RBP27.11■■□□□ 1.93
PDCD2-204ENST00000453163 ARHGAP31Q2M1Z3 1444 aa27.11■■□□□ 1.93
PDCD2-204ENST00000453163 RNF123Q5XPI4 1314 aa27.1■■□□□ 1.93
PDCD2-204ENST00000453163 C14orf93Q9H972 538 aaKnown RBP27.1■■□□□ 1.93
PDCD2-204ENST00000453163 RPGRIP1LQ68CZ1 1315 aa27.1■■□□□ 1.93
PDCD2-204ENST00000453163 SBNO2Q9Y2G9 1366 aa27.09■■□□□ 1.93
PDCD2-204ENST00000453163 PPP2R1AP30153 589 aa27.09■■□□□ 1.93
PDCD2-204ENST00000453163 SLC24A1O60721 1099 aa27.09■■□□□ 1.93
PDCD2-204ENST00000453163 ZMYM4Q5VZL5 1548 aa27.09■■□□□ 1.93
PDCD2-204ENST00000453163 TRAK1Q9UPV9 953 aa27.08■■□□□ 1.93
PDCD2-204ENST00000453163 NEXMIFQ5QGS0 1516 aa27.08■■□□□ 1.93
PDCD2-204ENST00000453163 QRICH2Q9H0J4 1663 aa27.08■■□□□ 1.93
PDCD2-204ENST00000453163 CENPJQ9HC77 1338 aaPredicted RBP27.08■■□□□ 1.93
PDCD2-204ENST00000453163 NUTM2DQ5VT03 806 aaPredicted RBP27.06■■□□□ 1.92
PDCD2-204ENST00000453163 TMEM132EQ6IEE7 984 aa27.06■■□□□ 1.92
PDCD2-204ENST00000453163 INSRP06213 1382 aa27.06■■□□□ 1.92
PDCD2-204ENST00000453163 B4GALNT3Q6L9W6 998 aa27.04■■□□□ 1.92
PDCD2-204ENST00000453163 PREX1Q8TCU6 1659 aa27.04■■□□□ 1.92
PDCD2-204ENST00000453163 MYO5BQ9ULV0 1848 aa27.04■■□□□ 1.92
PDCD2-204ENST00000453163 NPC1L1Q9UHC9 1359 aa27.04■■□□□ 1.92
PDCD2-204ENST00000453163 IDI1Q13907 227 aa27.03■■□□□ 1.92
PDCD2-204ENST00000453163 ADAMTS8Q9UP79 889 aa27■■□□□ 1.91
PDCD2-204ENST00000453163 CARD14Q9BXL6 1004 aa26.99■■□□□ 1.91
PDCD2-204ENST00000453163 PDE3BQ13370 1112 aa26.99■■□□□ 1.91
PDCD2-204ENST00000453163 VGFO15240 615 aaPredicted RBP26.98■■□□□ 1.91
PDCD2-204ENST00000453163 ARHGEF28Q8N1W1 1705 aaKnown RBP26.98■■□□□ 1.91
PDCD2-204ENST00000453163 CDCA7LQ96GN5 454 aa26.97■■□□□ 1.91
PDCD2-204ENST00000453163 SLC52A1Q9NWF4 448 aa26.96■■□□□ 1.91
PDCD2-204ENST00000453163 TMEM131LA2VDJ0 1609 aa26.95■■□□□ 1.91
PDCD2-204ENST00000453163 WDR43Q15061 677 aaKnown RBP eCLIP26.94■■□□□ 1.9
PDCD2-204ENST00000453163 RCAN3Q9UKA8 241 aa26.91■■□□□ 1.9
PDCD2-204ENST00000453163 FBXO31Q5XUX0 539 aaPredicted RBP26.91■■□□□ 1.9
PDCD2-204ENST00000453163 SENP3Q9H4L4 574 aaPredicted RBP26.91■■□□□ 1.9
PDCD2-204ENST00000453163 REREQ9P2R6 1566 aa26.9■■□□□ 1.9
PDCD2-204ENST00000453163 ZFYVE9O95405 1425 aa26.89■■□□□ 1.9
PDCD2-204ENST00000453163 RRP1P56182 461 aaKnown RBP26.89■■□□□ 1.89
PDCD2-204ENST00000453163 NSD3Q9BZ95 1437 aa26.88■■□□□ 1.89
PDCD2-204ENST00000453163 SLC12A5Q9H2X9 1139 aa26.88■■□□□ 1.89
PDCD2-204ENST00000453163 TULP4Q9NRJ4 1543 aa26.87■■□□□ 1.89
PDCD2-204ENST00000453163 BCL11AQ9H165 835 aa26.86■■□□□ 1.89
PDCD2-204ENST00000453163 CLTCQ00610 1675 aaKnown RBP26.86■■□□□ 1.89
PDCD2-204ENST00000453163 AGLP35573 1532 aa26.85■■□□□ 1.89
PDCD2-204ENST00000453163 MSH5O43196 834 aa26.85■■□□□ 1.89
PDCD2-204ENST00000453163 PLEKHH1Q9ULM0 1364 aa26.85■■□□□ 1.89
PDCD2-204ENST00000453163 FANCIQ9NVI1 1328 aa26.84■■□□□ 1.89
PDCD2-204ENST00000453163 KIF13AQ9H1H9 1805 aa26.83■■□□□ 1.89
PDCD2-204ENST00000453163 CCDC136Q96JN2 1154 aa26.82■■□□□ 1.88
PDCD2-204ENST00000453163 SAFB2Q14151 953 aaKnown RBP eCLIP26.81■■□□□ 1.88
PDCD2-204ENST00000453163 EVC2Q86UK5 1308 aa26.8■■□□□ 1.88
PDCD2-204ENST00000453163 STK26Q9P289 416 aa26.8■■□□□ 1.88
PDCD2-204ENST00000453163 USP32Q8NFA0 1604 aa26.79■■□□□ 1.88
PDCD2-204ENST00000453163 CCDC146Q8IYE0 955 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms