RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 TMEM2Q9UHN6 1383 aa15.86■□□□□ 0.13
LINC01004-202ENST00000450686 MYO5BQ9ULV0 1848 aa15.85■□□□□ 0.13
LINC01004-202ENST00000450686 LMTK2Q8IWU2 1503 aa15.85■□□□□ 0.13
LINC01004-202ENST00000450686 SLC26A8Q96RN1 970 aa15.84■□□□□ 0.13
LINC01004-202ENST00000450686 RNF39Q9H2S5 420 aa15.84■□□□□ 0.13
LINC01004-202ENST00000450686 EID1Q9Y6B2 187 aa15.84■□□□□ 0.13
LINC01004-202ENST00000450686 ADGRB3O60242 1522 aa15.83■□□□□ 0.12
LINC01004-202ENST00000450686 NOS1P29475 1434 aa15.82■□□□□ 0.12
LINC01004-202ENST00000450686 ADGRL2O95490 1459 aa15.82■□□□□ 0.12
LINC01004-202ENST00000450686 TET3O43151 1660 aa15.8■□□□□ 0.12
LINC01004-202ENST00000450686 GCC2Q8IWJ2 1684 aa15.8■□□□□ 0.12
LINC01004-202ENST00000450686 TMEM94Q12767 1356 aa15.8■□□□□ 0.12
LINC01004-202ENST00000450686 KDM5AP29375 1690 aaKnown RBP15.79■□□□□ 0.12
LINC01004-202ENST00000450686 ANKRD50Q9ULJ7 1429 aa15.78■□□□□ 0.12
LINC01004-202ENST00000450686 PPARGC1BQ86YN6 1023 aaKnown RBP15.77■□□□□ 0.12
LINC01004-202ENST00000450686 BCANQ96GW7 911 aa15.77■□□□□ 0.12
LINC01004-202ENST00000450686 ROBO1Q9Y6N7 1651 aa15.76■□□□□ 0.11
LINC01004-202ENST00000450686 NUTM2DQ5VT03 806 aaPredicted RBP15.75■□□□□ 0.11
LINC01004-202ENST00000450686 PROSER2Q86WR7 435 aaPredicted RBP15.75■□□□□ 0.11
LINC01004-202ENST00000450686 NWD1Q149M9 1564 aa15.75■□□□□ 0.11
LINC01004-202ENST00000450686 KCNA6P17658 529 aa15.74■□□□□ 0.11
LINC01004-202ENST00000450686 RGS17Q9UGC6 210 aaPredicted RBP15.74■□□□□ 0.11
LINC01004-202ENST00000450686 UNC13BO14795 1591 aa15.74■□□□□ 0.11
LINC01004-202ENST00000450686 E9PCH4 1651 aa15.73■□□□□ 0.11
LINC01004-202ENST00000450686 TMEM131LA2VDJ0 1609 aa15.73■□□□□ 0.11
LINC01004-202ENST00000450686 ZFYVE9O95405 1425 aa15.73■□□□□ 0.11
LINC01004-202ENST00000450686 RIMS2Q9UQ26 1411 aa15.72■□□□□ 0.11
LINC01004-202ENST00000450686 CHGAP10645 457 aaKnown RBP15.72■□□□□ 0.11
LINC01004-202ENST00000450686 ITGAEP38570 1179 aa15.72■□□□□ 0.11
LINC01004-202ENST00000450686 U3KPZ7 1027 aaPredicted RBP15.71■□□□□ 0.11
LINC01004-202ENST00000450686 ZBTB22O15209 634 aa15.7■□□□□ 0.1
LINC01004-202ENST00000450686 SLC52A1Q9NWF4 448 aa15.7■□□□□ 0.1
LINC01004-202ENST00000450686 CHD2O14647 1828 aaKnown RBP15.7■□□□□ 0.1
LINC01004-202ENST00000450686 RPRD2Q5VT52 1461 aaKnown RBP15.7■□□□□ 0.1
LINC01004-202ENST00000450686 FAM135BQ49AJ0 1406 aa15.69■□□□□ 0.1
LINC01004-202ENST00000450686 PPP1R15AO75807 674 aaPredicted RBP15.69■□□□□ 0.1
LINC01004-202ENST00000450686 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
LINC01004-202ENST00000450686 NKTRP30414 1462 aaKnown RBP15.69■□□□□ 0.1
LINC01004-202ENST00000450686 PLEKHG1Q9ULL1 1385 aa15.68■□□□□ 0.1
LINC01004-202ENST00000450686 IQGAP3Q86VI3 1631 aa15.67■□□□□ 0.1
LINC01004-202ENST00000450686 PHLPP1O60346 1717 aa15.66■□□□□ 0.1
LINC01004-202ENST00000450686 MSH6P52701 1360 aa15.65■□□□□ 0.1
LINC01004-202ENST00000450686 POTEAQ6S8J7 498 aa15.65■□□□□ 0.1
LINC01004-202ENST00000450686 ADAMTS13Q76LX8 1427 aa15.64■□□□□ 0.09
LINC01004-202ENST00000450686 SETD1AO15047 1707 aaKnown RBP15.63■□□□□ 0.09
LINC01004-202ENST00000450686 NUP155O75694 1391 aa15.62■□□□□ 0.09
LINC01004-202ENST00000450686 C1QBPQ07021 282 aaKnown RBP15.62■□□□□ 0.09
LINC01004-202ENST00000450686 SLAIN2Q9P270 581 aa15.62■□□□□ 0.09
LINC01004-202ENST00000450686 ROCK1Q13464 1354 aa15.62■□□□□ 0.09
LINC01004-202ENST00000450686 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.61■□□□□ 0.09
LINC01004-202ENST00000450686 C14orf37Q86TY3 774 aa15.61■□□□□ 0.09
LINC01004-202ENST00000450686 COL16A1Q07092 1604 aaPredicted RBP15.6■□□□□ 0.09
LINC01004-202ENST00000450686 PTPRUQ92729 1446 aa15.6■□□□□ 0.09
LINC01004-202ENST00000450686 TBX22Q9Y458 520 aa15.59■□□□□ 0.09
LINC01004-202ENST00000450686 SPHKAPQ2M3C7 1700 aa15.59■□□□□ 0.09
LINC01004-202ENST00000450686 NRXN3Q9Y4C0 1643 aa15.58■□□□□ 0.09
LINC01004-202ENST00000450686 DIP2AQ14689 1571 aa15.57■□□□□ 0.08
LINC01004-202ENST00000450686 LRP6O75581 1613 aa15.57■□□□□ 0.08
LINC01004-202ENST00000450686 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.56■□□□□ 0.08
LINC01004-202ENST00000450686 TRPM2O94759 1503 aa15.55■□□□□ 0.08
LINC01004-202ENST00000450686 HDGFP51858 240 aaKnown RBP15.55■□□□□ 0.08
LINC01004-202ENST00000450686 CLTCL1P53675 1640 aa15.54■□□□□ 0.08
LINC01004-202ENST00000450686 JCADQ9P266 1359 aa15.54■□□□□ 0.08
LINC01004-202ENST00000450686 MYCNP04198 464 aaPredicted RBP15.54■□□□□ 0.08
LINC01004-202ENST00000450686 AMOTL2Q9Y2J4 779 aa15.54■□□□□ 0.08
LINC01004-202ENST00000450686 XRN1Q8IZH2 1706 aaKnown RBP15.54■□□□□ 0.08
LINC01004-202ENST00000450686 ZNF326Q5BKZ1 582 aaKnown RBP15.53■□□□□ 0.08
LINC01004-202ENST00000450686 ATF3P18847 181 aa15.52■□□□□ 0.08
LINC01004-202ENST00000450686 METP08581 1390 aa15.51■□□□□ 0.07
LINC01004-202ENST00000450686 AHDC1Q5TGY3 1603 aaPredicted RBP15.51■□□□□ 0.07
LINC01004-202ENST00000450686 SETBP1Q9Y6X0 1596 aa15.5■□□□□ 0.07
LINC01004-202ENST00000450686 C19orf44Q9H6X5 657 aa15.5■□□□□ 0.07
LINC01004-202ENST00000450686 PIK3R4Q99570 1358 aa15.49■□□□□ 0.07
LINC01004-202ENST00000450686 BRINP3Q76B58 766 aa15.49■□□□□ 0.07
LINC01004-202ENST00000450686 CADPS2Q86UW7 1296 aa15.49■□□□□ 0.07
LINC01004-202ENST00000450686 DDX17Q92841 729 aaKnown RBP15.49■□□□□ 0.07
LINC01004-202ENST00000450686 NCOA3Q9Y6Q9 1424 aa15.49■□□□□ 0.07
LINC01004-202ENST00000450686 NEXMIFQ5QGS0 1516 aa15.48■□□□□ 0.07
LINC01004-202ENST00000450686 SHPRHQ149N8 1683 aa15.48■□□□□ 0.07
LINC01004-202ENST00000450686 MEX3CQ5U5Q3 659 aaKnown RBP15.48■□□□□ 0.07
LINC01004-202ENST00000450686 NALCNQ8IZF0 1738 aa15.48■□□□□ 0.07
LINC01004-202ENST00000450686 ASXL1Q8IXJ9 1541 aa15.48■□□□□ 0.07
LINC01004-202ENST00000450686 NUTM2BA6NNL0 878 aaPredicted RBP15.47■□□□□ 0.07
LINC01004-202ENST00000450686 NUTM2EB1AL46 878 aaPredicted RBP15.47■□□□□ 0.07
LINC01004-202ENST00000450686 NUTM2AQ8IVF1 878 aaPredicted RBP15.47■□□□□ 0.07
LINC01004-202ENST00000450686 NAIPQ13075 1403 aa15.46■□□□□ 0.07
LINC01004-202ENST00000450686 KIF1BO60333 1816 aa15.45■□□□□ 0.06
LINC01004-202ENST00000450686 MST1RQ04912 1400 aa15.45■□□□□ 0.06
LINC01004-202ENST00000450686 TRIM52Q96A61 297 aa15.45■□□□□ 0.06
LINC01004-202ENST00000450686 RRBP1Q9P2E9 1410 aaKnown RBP15.44■□□□□ 0.06
LINC01004-202ENST00000450686 NHSL1Q5SYE7 1610 aa15.44■□□□□ 0.06
LINC01004-202ENST00000450686 SPATA31A6Q5VVP1 1343 aa15.43■□□□□ 0.06
LINC01004-202ENST00000450686 ADGRL3Q9HAR2 1447 aa15.42■□□□□ 0.06
LINC01004-202ENST00000450686 DCCP43146 1447 aa15.41■□□□□ 0.06
LINC01004-202ENST00000450686 ROBO2Q9HCK4 1378 aa15.38■□□□□ 0.05
LINC01004-202ENST00000450686 SAMD1Q6SPF0 538 aaPredicted RBP15.38■□□□□ 0.05
LINC01004-202ENST00000450686 AFF2P51816 1311 aa15.38■□□□□ 0.05
LINC01004-202ENST00000450686 PPLO60437 1756 aa15.36■□□□□ 0.05
LINC01004-202ENST00000450686 SETD5Q9C0A6 1442 aa15.36■□□□□ 0.05
LINC01004-202ENST00000450686 ZNF772Q68DY9 489 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms