RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 TROQ12816 1431 aaPredicted RBP12.93□□□□□ -0.34
CTC1-202ENST00000449476 CCDC184Q52MB2 194 aa12.92□□□□□ -0.34
CTC1-202ENST00000449476 GGNBP2Q9H3C7 697 aa12.92□□□□□ -0.34
CTC1-202ENST00000449476 CHMP3Q9Y3E7 222 aa12.92□□□□□ -0.34
CTC1-202ENST00000449476 C9orf84Q5VXU9 1444 aa12.92□□□□□ -0.34
CTC1-202ENST00000449476 ARHGAP5Q13017 1502 aa12.92□□□□□ -0.34
CTC1-202ENST00000449476 PPP2R1AP30153 589 aa12.92□□□□□ -0.34
CTC1-202ENST00000449476 PNISRQ8TF01 805 aaKnown RBP12.92□□□□□ -0.34
CTC1-202ENST00000449476 NAIPQ13075 1403 aa12.92□□□□□ -0.34
CTC1-202ENST00000449476 GSE1Q14687 1217 aa12.91□□□□□ -0.34
CTC1-202ENST00000449476 PANK1Q8TE04 598 aa12.91□□□□□ -0.34
CTC1-202ENST00000449476 MTHFSP49914 203 aa12.91□□□□□ -0.34
CTC1-202ENST00000449476 KIAA2012Q0VF49 1180 aa12.9□□□□□ -0.34
CTC1-202ENST00000449476 GNL2Q13823 731 aaKnown RBP12.9□□□□□ -0.34
CTC1-202ENST00000449476 GORABQ5T7V8 394 aa12.9□□□□□ -0.34
CTC1-202ENST00000449476 BICRAQ9NZM4 1560 aa12.9□□□□□ -0.34
CTC1-202ENST00000449476 API5Q9BZZ5 524 aaKnown RBP12.9□□□□□ -0.34
CTC1-202ENST00000449476 DDX11L8A8MPP1 907 aa12.9□□□□□ -0.34
CTC1-202ENST00000449476 RILPL2Q969X0 211 aa12.9□□□□□ -0.34
CTC1-202ENST00000449476 CABP2Q9NPB3 220 aa12.9□□□□□ -0.34
CTC1-202ENST00000449476 TCP11L2Q8N4U5 519 aa12.89□□□□□ -0.35
CTC1-202ENST00000449476 HTATSF1O43719 755 aaKnown RBP12.89□□□□□ -0.35
CTC1-202ENST00000449476 DAPK1P53355 1430 aa12.88□□□□□ -0.35
CTC1-202ENST00000449476 FOXD4L5Q5VV16 416 aaPredicted RBP12.88□□□□□ -0.35
CTC1-202ENST00000449476 FOXD4L4Q8WXT5 416 aaPredicted RBP12.88□□□□□ -0.35
CTC1-202ENST00000449476 KIF16BQ96L93 1317 aa12.88□□□□□ -0.35
CTC1-202ENST00000449476 HMOX1P09601 288 aa12.88□□□□□ -0.35
CTC1-202ENST00000449476 AKNAQ7Z591 1439 aa12.87□□□□□ -0.35
CTC1-202ENST00000449476 TEFQ10587 303 aa12.87□□□□□ -0.35
CTC1-202ENST00000449476 MRC2Q9UBG0 1479 aa12.87□□□□□ -0.35
CTC1-202ENST00000449476 TAF7LQ5H9L4 462 aa12.86□□□□□ -0.35
CTC1-202ENST00000449476 LNPKQ9C0E8 428 aa12.86□□□□□ -0.35
CTC1-202ENST00000449476 DDX49Q9Y6V7 483 aaKnown RBP12.86□□□□□ -0.35
CTC1-202ENST00000449476 CC2D2AQ9P2K1 1620 aa12.86□□□□□ -0.35
CTC1-202ENST00000449476 TULP1O00294 542 aaPredicted RBP12.86□□□□□ -0.35
CTC1-202ENST00000449476 GNAI1P63096 354 aa12.86□□□□□ -0.35
CTC1-202ENST00000449476 DNMBPQ6XZF7 1577 aa12.86□□□□□ -0.35
CTC1-202ENST00000449476 IFT140Q96RY7 1462 aa12.86□□□□□ -0.35
CTC1-202ENST00000449476 AAMPQ13685 434 aa12.86□□□□□ -0.35
CTC1-202ENST00000449476 HECW1Q76N89 1606 aa12.86□□□□□ -0.35
CTC1-202ENST00000449476 HSP90B1P14625 803 aaKnown RBP12.85□□□□□ -0.35
CTC1-202ENST00000449476 SUPT6HQ7KZ85 1726 aaKnown RBP12.85□□□□□ -0.35
CTC1-202ENST00000449476 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.84□□□□□ -0.35
CTC1-202ENST00000449476 EPRSP07814 1512 aaKnown RBP12.84□□□□□ -0.35
CTC1-202ENST00000449476 REC8O95072 547 aa12.84□□□□□ -0.35
CTC1-202ENST00000449476 EIF2S2P20042 333 aaKnown RBP12.84□□□□□ -0.35
CTC1-202ENST00000449476 CSPP1Q1MSJ5 1256 aa12.84□□□□□ -0.35
CTC1-202ENST00000449476 SLC12A5Q9H2X9 1139 aa12.84□□□□□ -0.35
CTC1-202ENST00000449476 CDK13Q14004 1512 aaKnown RBP12.84□□□□□ -0.35
CTC1-202ENST00000449476 FAM69CQ0P6D2 419 aa12.84□□□□□ -0.35
CTC1-202ENST00000449476 NECTIN2Q92692 538 aa12.84□□□□□ -0.35
CTC1-202ENST00000449476 ABCA10Q8WWZ4 1543 aa12.83□□□□□ -0.35
CTC1-202ENST00000449476 C1orf141Q5JVX7 400 aa12.83□□□□□ -0.36
CTC1-202ENST00000449476 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.83□□□□□ -0.36
CTC1-202ENST00000449476 CHMP5Q9NZZ3 219 aa12.83□□□□□ -0.36
CTC1-202ENST00000449476 PCF11O94913 1555 aaKnown RBP12.82□□□□□ -0.36
CTC1-202ENST00000449476 FKBP5Q13451 457 aaPredicted RBP12.82□□□□□ -0.36
CTC1-202ENST00000449476 SKOR2Q2VWA4 1001 aaPredicted RBP12.82□□□□□ -0.36
CTC1-202ENST00000449476 SNAPC4Q5SXM2 1469 aa12.82□□□□□ -0.36
CTC1-202ENST00000449476 ROCK1Q13464 1354 aa12.82□□□□□ -0.36
CTC1-202ENST00000449476 C22orf23Q9BZE7 217 aa12.82□□□□□ -0.36
CTC1-202ENST00000449476 FOXD4L6Q3SYB3 417 aaPredicted RBP12.81□□□□□ -0.36
CTC1-202ENST00000449476 FOXD4L3Q6VB84 417 aaPredicted RBP12.81□□□□□ -0.36
CTC1-202ENST00000449476 PEG3Q9GZU2 1588 aa12.81□□□□□ -0.36
CTC1-202ENST00000449476 C11orf95C9JLR9 678 aaPredicted RBP12.81□□□□□ -0.36
CTC1-202ENST00000449476 PHF14O94880 888 aa12.81□□□□□ -0.36
CTC1-202ENST00000449476 C9orf78Q9NZ63 289 aaPredicted RBP12.8□□□□□ -0.36
CTC1-202ENST00000449476 SMG6Q86US8 1419 aaKnown RBP12.8□□□□□ -0.36
CTC1-202ENST00000449476 PDE3AQ14432 1141 aa12.8□□□□□ -0.36
CTC1-202ENST00000449476 PLEKHH2Q8IVE3 1493 aa12.8□□□□□ -0.36
CTC1-202ENST00000449476 KIAA0586Q9BVV6 1533 aa12.8□□□□□ -0.36
CTC1-202ENST00000449476 BCAR3O75815 825 aa12.8□□□□□ -0.36
CTC1-202ENST00000449476 NFKBIBQ15653 356 aa12.8□□□□□ -0.36
CTC1-202ENST00000449476 SCAPERQ9BY12 1400 aa12.8□□□□□ -0.36
CTC1-202ENST00000449476 EXOSC9Q06265 439 aaKnown RBP12.8□□□□□ -0.36
CTC1-202ENST00000449476 DIAPH3Q9NSV4 1193 aa12.8□□□□□ -0.36
CTC1-202ENST00000449476 TSPYL4Q9UJ04 414 aa12.8□□□□□ -0.36
CTC1-202ENST00000449476 UNC13AQ9UPW8 1703 aa12.79□□□□□ -0.36
CTC1-202ENST00000449476 ANKRD30BQ9BXX2 1392 aa12.79□□□□□ -0.36
CTC1-202ENST00000449476 MAP3K1Q13233 1512 aa12.79□□□□□ -0.36
CTC1-202ENST00000449476 ERBINQ96RT1 1412 aa12.79□□□□□ -0.36
CTC1-202ENST00000449476 ISY1Q9ULR0 285 aaKnown RBP12.78□□□□□ -0.36
CTC1-202ENST00000449476 KIF3AQ9Y496 699 aa12.78□□□□□ -0.36
CTC1-202ENST00000449476 NEXNQ0ZGT2 675 aa12.78□□□□□ -0.36
CTC1-202ENST00000449476 CCDC9Q9Y3X0 531 aaKnown RBP12.78□□□□□ -0.36
CTC1-202ENST00000449476 PRKAR2BP31323 418 aa12.78□□□□□ -0.36
CTC1-202ENST00000449476 ANO2Q9NQ90 1003 aa12.78□□□□□ -0.36
CTC1-202ENST00000449476 PRAM1Q96QH2 718 aa12.77□□□□□ -0.36
CTC1-202ENST00000449476 ATP6V1DQ9Y5K8 247 aa12.77□□□□□ -0.36
CTC1-202ENST00000449476 INTS3Q68E01 1043 aaKnown RBP12.77□□□□□ -0.37
CTC1-202ENST00000449476 RUFY2Q8WXA3 655 aa12.77□□□□□ -0.37
CTC1-202ENST00000449476 PDZRN3Q9UPQ7 1066 aa12.77□□□□□ -0.37
CTC1-202ENST00000449476 PSME1Q06323 249 aa12.76□□□□□ -0.37
CTC1-202ENST00000449476 ARID3AQ99856 593 aa12.76□□□□□ -0.37
CTC1-202ENST00000449476 BACH2Q9BYV9 841 aa12.76□□□□□ -0.37
CTC1-202ENST00000449476 TSR2Q969E8 191 aaKnown RBP12.76□□□□□ -0.37
CTC1-202ENST00000449476 ZKSCAN1P17029 563 aaPredicted RBP12.75□□□□□ -0.37
CTC1-202ENST00000449476 TPM4P67936 248 aa12.75□□□□□ -0.37
CTC1-202ENST00000449476 SF3A1Q15459 793 aaKnown RBP12.75□□□□□ -0.37
CTC1-202ENST00000449476 IQGAP2Q13576 1575 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms