RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 CFAP70Q5T0N1 1121 aa8.98□□□□□ -0.97
BEST1-202ENST00000449131 GRIN2AQ12879 1464 aa8.98□□□□□ -0.97
BEST1-202ENST00000449131 IQGAP2Q13576 1575 aa8.98□□□□□ -0.97
BEST1-202ENST00000449131 FGD1P98174 961 aa8.98□□□□□ -0.97
BEST1-202ENST00000449131 TROQ12816 1431 aaPredicted RBP8.98□□□□□ -0.97
BEST1-202ENST00000449131 NFKBIBQ15653 356 aa8.98□□□□□ -0.97
BEST1-202ENST00000449131 TMEM132EQ6IEE7 984 aa8.98□□□□□ -0.97
BEST1-202ENST00000449131 SLC4A10Q6U841 1118 aa8.98□□□□□ -0.97
BEST1-202ENST00000449131 KIAA0586Q9BVV6 1533 aa8.97□□□□□ -0.97
BEST1-202ENST00000449131 DAPK1P53355 1430 aa8.97□□□□□ -0.97
BEST1-202ENST00000449131 GBP4Q96PP9 640 aa8.97□□□□□ -0.97
BEST1-202ENST00000449131 STK31Q9BXU1 1019 aa8.97□□□□□ -0.97
BEST1-202ENST00000449131 C9orf84Q5VXU9 1444 aa8.97□□□□□ -0.97
BEST1-202ENST00000449131 EPRSP07814 1512 aaKnown RBP8.96□□□□□ -0.97
BEST1-202ENST00000449131 NGDNQ8NEJ9 315 aaKnown RBP8.96□□□□□ -0.97
BEST1-202ENST00000449131 STAC3Q96MF2 364 aa8.96□□□□□ -0.97
BEST1-202ENST00000449131 FRAT2O75474 233 aaPredicted RBP8.96□□□□□ -0.98
BEST1-202ENST00000449131 PPP2R1AP30153 589 aa8.96□□□□□ -0.98
BEST1-202ENST00000449131 LMOD3Q0VAK6 560 aa8.96□□□□□ -0.98
BEST1-202ENST00000449131 ZRSR1Q15695 479 aaKnown RBP8.96□□□□□ -0.98
BEST1-202ENST00000449131 PANK1Q8TE04 598 aa8.96□□□□□ -0.98
BEST1-202ENST00000449131 VSIG10Q8N0Z9 540 aa8.95□□□□□ -0.98
BEST1-202ENST00000449131 NGEFQ8N5V2 710 aa8.95□□□□□ -0.98
BEST1-202ENST00000449131 RUNDC1Q96C34 613 aa8.95□□□□□ -0.98
BEST1-202ENST00000449131 NAP1L2Q9ULW6 460 aaPredicted RBP8.95□□□□□ -0.98
BEST1-202ENST00000449131 PTPRKQ15262 1439 aa8.95□□□□□ -0.98
BEST1-202ENST00000449131 LTV1Q96GA3 475 aaPredicted RBP8.95□□□□□ -0.98
BEST1-202ENST00000449131 SYNJ2O15056 1496 aa8.95□□□□□ -0.98
BEST1-202ENST00000449131 AMPHP49418 695 aa8.95□□□□□ -0.98
BEST1-202ENST00000449131 ANKRD45Q5TZF3 282 aa8.95□□□□□ -0.98
BEST1-202ENST00000449131 CYB5RLQ6IPT4 315 aa8.95□□□□□ -0.98
BEST1-202ENST00000449131 USP35Q9P2H5 1018 aa8.95□□□□□ -0.98
BEST1-202ENST00000449131 RIPK4P57078 832 aa8.94□□□□□ -0.98
BEST1-202ENST00000449131 ARHGAP5Q13017 1502 aa8.94□□□□□ -0.98
BEST1-202ENST00000449131 DIAPH1O60610 1272 aaKnown RBP8.94□□□□□ -0.98
BEST1-202ENST00000449131 C20orf194Q5TEA3 1177 aa8.94□□□□□ -0.98
BEST1-202ENST00000449131 GGNBP2Q9H3C7 697 aa8.94□□□□□ -0.98
BEST1-202ENST00000449131 SUPT6HQ7KZ85 1726 aaKnown RBP8.94□□□□□ -0.98
BEST1-202ENST00000449131 KIAA1211Q6ZU35 1233 aa8.94□□□□□ -0.98
BEST1-202ENST00000449131 TARBP1Q13395 1621 aaKnown RBP8.94□□□□□ -0.98
BEST1-202ENST00000449131 HMMRO75330 724 aa8.94□□□□□ -0.98
BEST1-202ENST00000449131 DZIP1LQ8IYY4 767 aaKnown RBP8.94□□□□□ -0.98
BEST1-202ENST00000449131 COG3Q96JB2 828 aa8.94□□□□□ -0.98
BEST1-202ENST00000449131 HECW1Q76N89 1606 aa8.93□□□□□ -0.98
BEST1-202ENST00000449131 MTHFSP49914 203 aa8.93□□□□□ -0.98
BEST1-202ENST00000449131 ABCA5Q8WWZ7 1642 aa8.93□□□□□ -0.98
BEST1-202ENST00000449131 GOLGA6L4A6NEF3 574 aa8.93□□□□□ -0.98
BEST1-202ENST00000449131 TRIM6-TRIM34B2RNG4 842 aa8.93□□□□□ -0.98
BEST1-202ENST00000449131 FOXD4L5Q5VV16 416 aaPredicted RBP8.93□□□□□ -0.98
BEST1-202ENST00000449131 FOXD4L4Q8WXT5 416 aaPredicted RBP8.93□□□□□ -0.98
BEST1-202ENST00000449131 CABP2Q9NPB3 220 aa8.93□□□□□ -0.98
BEST1-202ENST00000449131 EID1Q9Y6B2 187 aa8.93□□□□□ -0.98
BEST1-202ENST00000449131 MAP3K1Q13233 1512 aa8.93□□□□□ -0.98
BEST1-202ENST00000449131 BCAR3O75815 825 aa8.93□□□□□ -0.98
BEST1-202ENST00000449131 OSCARQ8IYS5 282 aa8.93□□□□□ -0.98
BEST1-202ENST00000449131 ANKRD30BQ9BXX2 1392 aa8.92□□□□□ -0.98
BEST1-202ENST00000449131 GOLGA6L3A6NEY3 463 aa8.92□□□□□ -0.98
BEST1-202ENST00000449131 NPM3O75607 178 aaKnown RBP8.92□□□□□ -0.98
BEST1-202ENST00000449131 TCP11L2Q8N4U5 519 aa8.92□□□□□ -0.98
BEST1-202ENST00000449131 BACH2Q9BYV9 841 aa8.92□□□□□ -0.98
BEST1-202ENST00000449131 DDX19BQ9UMR2 479 aa8.91□□□□□ -0.98
BEST1-202ENST00000449131 EIF4G3O43432 1585 aaKnown RBP8.91□□□□□ -0.98
BEST1-202ENST00000449131 THOC2Q8NI27 1593 aaKnown RBP8.91□□□□□ -0.98
BEST1-202ENST00000449131 NOL8Q76FK4 1167 aaKnown RBP8.91□□□□□ -0.98
BEST1-202ENST00000449131 ROCK1Q13464 1354 aa8.91□□□□□ -0.98
BEST1-202ENST00000449131 MSNP26038 577 aaKnown RBP8.91□□□□□ -0.98
BEST1-202ENST00000449131 SLC12A5Q9H2X9 1139 aa8.91□□□□□ -0.98
BEST1-202ENST00000449131 FOXD4L6Q3SYB3 417 aaPredicted RBP8.9□□□□□ -0.98
BEST1-202ENST00000449131 FOXD4L3Q6VB84 417 aaPredicted RBP8.9□□□□□ -0.98
BEST1-202ENST00000449131 CTTNBP2Q8WZ74 1663 aa8.9□□□□□ -0.98
BEST1-202ENST00000449131 HMOX1P09601 288 aa8.9□□□□□ -0.98
BEST1-202ENST00000449131 CSB-PGBD3P0DP91 1061 aa8.9□□□□□ -0.99
BEST1-202ENST00000449131 ADAMTS12P58397 1594 aa8.89□□□□□ -0.99
BEST1-202ENST00000449131 ABCC5O15440 1437 aa8.89□□□□□ -0.99
BEST1-202ENST00000449131 WDR62O43379 1518 aa8.89□□□□□ -0.99
BEST1-202ENST00000449131 SMG6Q86US8 1419 aaKnown RBP8.89□□□□□ -0.99
BEST1-202ENST00000449131 MAPKBP1O60336 1514 aa8.89□□□□□ -0.99
BEST1-202ENST00000449131 MAGI1Q96QZ7 1491 aaPredicted RBP8.89□□□□□ -0.99
BEST1-202ENST00000449131 PTPN23Q9H3S7 1636 aa8.89□□□□□ -0.99
BEST1-202ENST00000449131 PTMSP20962 102 aa8.88□□□□□ -0.99
BEST1-202ENST00000449131 LNPKQ9C0E8 428 aa8.88□□□□□ -0.99
BEST1-202ENST00000449131 ARHGEF11O15085 1522 aa8.88□□□□□ -0.99
BEST1-202ENST00000449131 ZNF330Q9Y3S2 320 aaPredicted RBP8.88□□□□□ -0.99
BEST1-202ENST00000449131 PBRM1Q86U86 1689 aa8.87□□□□□ -0.99
BEST1-202ENST00000449131 SCAPERQ9BY12 1400 aa8.87□□□□□ -0.99
BEST1-202ENST00000449131 CHMP4AQ9BY43 222 aa8.87□□□□□ -0.99
BEST1-202ENST00000449131 NUP153P49790 1475 aaKnown RBP8.87□□□□□ -0.99
BEST1-202ENST00000449131 ERBINQ96RT1 1412 aa8.87□□□□□ -0.99
BEST1-202ENST00000449131 DISP1Q96F81 1524 aa8.87□□□□□ -0.99
BEST1-202ENST00000449131 ST18O60284 1047 aa8.87□□□□□ -0.99
BEST1-202ENST00000449131 UBE2Q2Q8WVN8 375 aa8.87□□□□□ -0.99
BEST1-202ENST00000449131 FBXO3Q9UK99 471 aa8.87□□□□□ -0.99
BEST1-202ENST00000449131 RILPL2Q969X0 211 aa8.86□□□□□ -0.99
BEST1-202ENST00000449131 MAGI3Q5TCQ9 1506 aa8.86□□□□□ -0.99
BEST1-202ENST00000449131 API5Q9BZZ5 524 aaKnown RBP8.86□□□□□ -0.99
BEST1-202ENST00000449131 FAM69CQ0P6D2 419 aa8.86□□□□□ -0.99
BEST1-202ENST00000449131 NECTIN2Q92692 538 aa8.86□□□□□ -0.99
BEST1-202ENST00000449131 KIF16BQ96L93 1317 aa8.86□□□□□ -0.99
BEST1-202ENST00000449131 EXOSC9Q06265 439 aaKnown RBP8.85□□□□□ -0.99
BEST1-202ENST00000449131 NCOA1Q15788 1441 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms