RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 NEXMIFQ5QGS0 1516 aa27.88■■■□□ 2.05
SGCE-207ENST00000447873 MYOM2P54296 1465 aa27.87■■■□□ 2.05
SGCE-207ENST00000447873 CEP170BQ9Y4F5 1589 aaPredicted RBP27.87■■■□□ 2.05
SGCE-207ENST00000447873 PRAG1Q86YV5 1406 aa27.86■■■□□ 2.05
SGCE-207ENST00000447873 ZNF142P52746 1687 aaPredicted RBP27.84■■■□□ 2.05
SGCE-207ENST00000447873 VGFO15240 615 aaPredicted RBP27.83■■■□□ 2.05
SGCE-207ENST00000447873 NUTM2DQ5VT03 806 aaPredicted RBP27.82■■■□□ 2.04
SGCE-207ENST00000447873 RIMS2Q9UQ26 1411 aa27.82■■■□□ 2.04
SGCE-207ENST00000447873 THEMISQ8N1K5 641 aaPredicted RBP27.82■■■□□ 2.04
SGCE-207ENST00000447873 ADGRF5Q8IZF2 1346 aa27.81■■■□□ 2.04
SGCE-207ENST00000447873 TMEM2Q9UHN6 1383 aa27.8■■■□□ 2.04
SGCE-207ENST00000447873 HDGFP51858 240 aaKnown RBP27.8■■■□□ 2.04
SGCE-207ENST00000447873 ZFYVE9O95405 1425 aa27.79■■■□□ 2.04
SGCE-207ENST00000447873 NRXN1Q9ULB1 1477 aa27.79■■■□□ 2.04
SGCE-207ENST00000447873 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.78■■■□□ 2.04
SGCE-207ENST00000447873 TRPM1Q7Z4N2 1603 aa27.77■■■□□ 2.04
SGCE-207ENST00000447873 RALGAPBQ86X10 1494 aa27.76■■■□□ 2.03
SGCE-207ENST00000447873 SLIT1O75093 1534 aa27.74■■■□□ 2.03
SGCE-207ENST00000447873 PIK3C2GO75747 1445 aa27.74■■■□□ 2.03
SGCE-207ENST00000447873 ARHGAP23Q9P227 1491 aa27.72■■■□□ 2.03
SGCE-207ENST00000447873 KIAA1210Q9ULL0 1709 aa27.72■■■□□ 2.03
SGCE-207ENST00000447873 EID1Q9Y6B2 187 aa27.72■■■□□ 2.03
SGCE-207ENST00000447873 ROCK2O75116 1388 aaKnown RBP27.71■■■□□ 2.03
SGCE-207ENST00000447873 TXNDC2Q86VQ3 553 aa27.69■■■□□ 2.02
SGCE-207ENST00000447873 LTKP29376 864 aa27.68■■■□□ 2.02
SGCE-207ENST00000447873 NBPF1Q3BBV0 1214 aa27.68■■■□□ 2.02
SGCE-207ENST00000447873 CFAP70Q5T0N1 1121 aa27.68■■■□□ 2.02
SGCE-207ENST00000447873 SENP3Q9H4L4 574 aaPredicted RBP27.66■■■□□ 2.02
SGCE-207ENST00000447873 C14orf93Q9H972 538 aaKnown RBP27.66■■■□□ 2.02
SGCE-207ENST00000447873 LAMC1P11047 1609 aa27.66■■■□□ 2.02
SGCE-207ENST00000447873 CARD11Q9BXL7 1154 aa27.65■■■□□ 2.02
SGCE-207ENST00000447873 SCAF11Q99590 1463 aaKnown RBP27.64■■■□□ 2.02
SGCE-207ENST00000447873 GPRASP1Q5JY77 1395 aa27.63■■■□□ 2.01
SGCE-207ENST00000447873 BCANQ96GW7 911 aa27.63■■■□□ 2.01
SGCE-207ENST00000447873 ANKLE2Q86XL3 938 aa27.62■■■□□ 2.01
SGCE-207ENST00000447873 PLEKHG1Q9ULL1 1385 aa27.61■■■□□ 2.01
SGCE-207ENST00000447873 SETBP1Q9Y6X0 1596 aa27.6■■■□□ 2.01
SGCE-207ENST00000447873 ALKQ9UM73 1620 aa27.6■■■□□ 2.01
SGCE-207ENST00000447873 IQGAP1P46940 1657 aa27.59■■■□□ 2.01
SGCE-207ENST00000447873 NRXN3Q9Y4C0 1643 aa27.59■■■□□ 2.01
SGCE-207ENST00000447873 EIF4G2P78344 907 aaKnown RBP eCLIP27.59■■■□□ 2.01
SGCE-207ENST00000447873 LMTK3Q96Q04 1460 aa27.57■■■□□ 2
SGCE-207ENST00000447873 USP47Q96K76 1375 aa27.56■■■□□ 2
SGCE-207ENST00000447873 POLR1AO95602 1720 aaPredicted RBP27.55■■■□□ 2
SGCE-207ENST00000447873 ADGRB1O14514 1584 aa27.55■■■□□ 2
SGCE-207ENST00000447873 TMEM132EQ6IEE7 984 aa27.54■■■□□ 2
SGCE-207ENST00000447873 SETD1AO15047 1707 aaKnown RBP27.54■■■□□ 2
SGCE-207ENST00000447873 HSPA5P11021 654 aaKnown RBP27.52■■■□□ 2
SGCE-207ENST00000447873 ADAMTS13Q76LX8 1427 aa27.51■■□□□ 1.99
SGCE-207ENST00000447873 HSPA2P54652 639 aa27.51■■□□□ 1.99
SGCE-207ENST00000447873 HIRIP3Q9BW71 556 aaPredicted RBP27.51■■□□□ 1.99
SGCE-207ENST00000447873 ASXL1Q8IXJ9 1541 aa27.5■■□□□ 1.99
SGCE-207ENST00000447873 ZNF316A6NFI3 1004 aaPredicted RBP27.49■■□□□ 1.99
SGCE-207ENST00000447873 SLC26A8Q96RN1 970 aa27.48■■□□□ 1.99
SGCE-207ENST00000447873 NCKAP5LQ9HCH0 1330 aa27.48■■□□□ 1.99
SGCE-207ENST00000447873 MED14O60244 1454 aa27.47■■□□□ 1.99
SGCE-207ENST00000447873 DIP2AQ14689 1571 aa27.46■■□□□ 1.99
SGCE-207ENST00000447873 EIF3AQ14152 1382 aaKnown RBP27.46■■□□□ 1.99
SGCE-207ENST00000447873 NPHP4O75161 1426 aaPredicted RBP27.46■■□□□ 1.99
SGCE-207ENST00000447873 METP08581 1390 aa27.45■■□□□ 1.99
SGCE-207ENST00000447873 TBX22Q9Y458 520 aa27.45■■□□□ 1.99
SGCE-207ENST00000447873 YTHDC2Q9H6S0 1430 aaKnown RBP27.44■■□□□ 1.98
SGCE-207ENST00000447873 ST20-MTHFSA0A0A6YYL1 179 aa27.44■■□□□ 1.98
SGCE-207ENST00000447873 TRAK1Q9UPV9 953 aa27.44■■□□□ 1.98
SGCE-207ENST00000447873 STK26Q9P289 416 aa27.43■■□□□ 1.98
SGCE-207ENST00000447873 LRPPRCP42704 1394 aaKnown RBP27.39■■□□□ 1.98
SGCE-207ENST00000447873 ARHGEF28Q8N1W1 1705 aaKnown RBP27.39■■□□□ 1.97
SGCE-207ENST00000447873 STRCQ7RTU9 1775 aa27.36■■□□□ 1.97
SGCE-207ENST00000447873 ABCC11Q96J66 1382 aa27.36■■□□□ 1.97
SGCE-207ENST00000447873 PIK3R4Q99570 1358 aa27.35■■□□□ 1.97
SGCE-207ENST00000447873 KNDC1Q76NI1 1749 aa27.34■■□□□ 1.97
SGCE-207ENST00000447873 CENPJQ9HC77 1338 aaPredicted RBP27.34■■□□□ 1.97
SGCE-207ENST00000447873 DLC1Q96QB1 1528 aa27.33■■□□□ 1.97
SGCE-207ENST00000447873 TECPR2O15040 1411 aa27.31■■□□□ 1.96
SGCE-207ENST00000447873 PTPRUQ92729 1446 aa27.31■■□□□ 1.96
SGCE-207ENST00000447873 QRICH2Q9H0J4 1663 aa27.31■■□□□ 1.96
SGCE-207ENST00000447873 TESK2Q96S53 571 aa27.31■■□□□ 1.96
SGCE-207ENST00000447873 POGKQ9P215 609 aa27.31■■□□□ 1.96
SGCE-207ENST00000447873 AMOTL2Q9Y2J4 779 aa27.3■■□□□ 1.96
SGCE-207ENST00000447873 CHD2O14647 1828 aaKnown RBP27.29■■□□□ 1.96
SGCE-207ENST00000447873 PRAM1Q96QH2 718 aa27.29■■□□□ 1.96
SGCE-207ENST00000447873 CPS1P31327 1500 aa27.28■■□□□ 1.96
SGCE-207ENST00000447873 SIRT1Q96EB6 747 aa27.27■■□□□ 1.96
SGCE-207ENST00000447873 XRN1Q8IZH2 1706 aaKnown RBP27.27■■□□□ 1.96
SGCE-207ENST00000447873 SLC24A1O60721 1099 aa27.26■■□□□ 1.96
SGCE-207ENST00000447873 SAFB2Q14151 953 aaKnown RBP eCLIP27.26■■□□□ 1.95
SGCE-207ENST00000447873 SBNO2Q9Y2G9 1366 aa27.26■■□□□ 1.95
SGCE-207ENST00000447873 FAM135BQ49AJ0 1406 aa27.26■■□□□ 1.95
SGCE-207ENST00000447873 C11orf95C9JLR9 678 aaPredicted RBP27.25■■□□□ 1.95
SGCE-207ENST00000447873 TMF1P82094 1093 aa27.25■■□□□ 1.95
SGCE-207ENST00000447873 AEBP2Q6ZN18 517 aaPredicted RBP27.25■■□□□ 1.95
SGCE-207ENST00000447873 WAPLQ7Z5K2 1190 aa27.24■■□□□ 1.95
SGCE-207ENST00000447873 ROBO2Q9HCK4 1378 aa27.23■■□□□ 1.95
SGCE-207ENST00000447873 PTCH1Q13635 1447 aa27.22■■□□□ 1.95
SGCE-207ENST00000447873 PLEKHH1Q9ULM0 1364 aa27.22■■□□□ 1.95
SGCE-207ENST00000447873 KCNA6P17658 529 aa27.22■■□□□ 1.95
SGCE-207ENST00000447873 WASHC2AQ641Q2 1341 aa27.21■■□□□ 1.95
SGCE-207ENST00000447873 KIF7Q2M1P5 1343 aa27.2■■□□□ 1.95
SGCE-207ENST00000447873 DMRT2Q9Y5R5 561 aa27.2■■□□□ 1.94
SGCE-207ENST00000447873 CCDC7Q96M83 1385 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms