RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 TNRQ92752 1358 aa35.18■■■■□ 3.22
RFFL-206ENST00000447669 RIMS1Q86UR5 1692 aaKnown RBP35.17■■■■□ 3.22
RFFL-206ENST00000447669 NEXMIFQ5QGS0 1516 aa35.13■■■■□ 3.21
RFFL-206ENST00000447669 MYOM2P54296 1465 aa35.13■■■■□ 3.21
RFFL-206ENST00000447669 ADAMTSL3P82987 1691 aa35.13■■■■□ 3.21
RFFL-206ENST00000447669 USP47Q96K76 1375 aa35.11■■■■□ 3.21
RFFL-206ENST00000447669 CFAP70Q5T0N1 1121 aa35.11■■■■□ 3.21
RFFL-206ENST00000447669 RPGRIP1LQ68CZ1 1315 aa35.1■■■■□ 3.21
RFFL-206ENST00000447669 STAC3Q96MF2 364 aa35.1■■■■□ 3.21
RFFL-206ENST00000447669 DIEXFQ68CQ4 756 aaKnown RBP35.09■■■■□ 3.21
RFFL-206ENST00000447669 A2ML1A8K2U0 1454 aa35.09■■■■□ 3.21
RFFL-206ENST00000447669 NRXN1Q9ULB1 1477 aa35.06■■■■□ 3.2
RFFL-206ENST00000447669 GPRASP1Q5JY77 1395 aa35.03■■■■□ 3.2
RFFL-206ENST00000447669 C11orf95C9JLR9 678 aaPredicted RBP35.02■■■■□ 3.2
RFFL-206ENST00000447669 VGFO15240 615 aaPredicted RBP35.01■■■■□ 3.2
RFFL-206ENST00000447669 PIK3C2GO75747 1445 aa35.01■■■■□ 3.19
RFFL-206ENST00000447669 ST20-MTHFSA0A0A6YYL1 179 aa34.99■■■■□ 3.19
RFFL-206ENST00000447669 UBR1Q8IWV7 1749 aa34.97■■■■□ 3.19
RFFL-206ENST00000447669 RIMS2Q9UQ26 1411 aa34.95■■■■□ 3.19
RFFL-206ENST00000447669 KIAA1210Q9ULL0 1709 aa34.94■■■■□ 3.18
RFFL-206ENST00000447669 TMEM132EQ6IEE7 984 aa34.94■■■■□ 3.18
RFFL-206ENST00000447669 DDX10Q13206 875 aaKnown RBP34.93■■■■□ 3.18
RFFL-206ENST00000447669 C14orf93Q9H972 538 aaKnown RBP34.93■■■■□ 3.18
RFFL-206ENST00000447669 NLRP1Q9C000 1473 aa34.92■■■■□ 3.18
RFFL-206ENST00000447669 WASHC2AQ641Q2 1341 aa34.92■■■■□ 3.18
RFFL-206ENST00000447669 LAMC1P11047 1609 aa34.92■■■■□ 3.18
RFFL-206ENST00000447669 ZFYVE9O95405 1425 aa34.9■■■■□ 3.18
RFFL-206ENST00000447669 MYO3AQ8NEV4 1616 aa34.89■■■■□ 3.18
RFFL-206ENST00000447669 IQGAP1P46940 1657 aa34.86■■■■□ 3.17
RFFL-206ENST00000447669 TMEM2Q9UHN6 1383 aa34.84■■■■□ 3.17
RFFL-206ENST00000447669 KDM5AP29375 1690 aaKnown RBP34.84■■■■□ 3.17
RFFL-206ENST00000447669 PTPRMP28827 1452 aa34.84■■■■□ 3.17
RFFL-206ENST00000447669 SCAF11Q99590 1463 aaKnown RBP34.82■■■■□ 3.16
RFFL-206ENST00000447669 ADGRB1O14514 1584 aa34.81■■■■□ 3.16
RFFL-206ENST00000447669 KIF7Q2M1P5 1343 aa34.81■■■■□ 3.16
RFFL-206ENST00000447669 LTKP29376 864 aa34.81■■■■□ 3.16
RFFL-206ENST00000447669 POLR3GLQ9BT43 218 aa34.8■■■■□ 3.16
RFFL-206ENST00000447669 CCDC7Q96M83 1385 aa34.79■■■■□ 3.16
RFFL-206ENST00000447669 TRAK1Q9UPV9 953 aa34.79■■■■□ 3.16
RFFL-206ENST00000447669 SETBP1Q9Y6X0 1596 aa34.78■■■■□ 3.16
RFFL-206ENST00000447669 TESK2Q96S53 571 aa34.77■■■■□ 3.16
RFFL-206ENST00000447669 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.76■■■■□ 3.16
RFFL-206ENST00000447669 CEP170BQ9Y4F5 1589 aaPredicted RBP34.76■■■■□ 3.16
RFFL-206ENST00000447669 ALKQ9UM73 1620 aa34.75■■■■□ 3.15
RFFL-206ENST00000447669 ASXL1Q8IXJ9 1541 aa34.75■■■■□ 3.15
RFFL-206ENST00000447669 TXNDC2Q86VQ3 553 aa34.74■■■■□ 3.15
RFFL-206ENST00000447669 SETD1BQ9UPS6 1966 aaKnown RBP34.74■■■■□ 3.15
RFFL-206ENST00000447669 STK26Q9P289 416 aa34.73■■■■□ 3.15
RFFL-206ENST00000447669 THEMISQ8N1K5 641 aaPredicted RBP34.72■■■■□ 3.15
RFFL-206ENST00000447669 BCANQ96GW7 911 aa34.72■■■■□ 3.15
RFFL-206ENST00000447669 NRXN3Q9Y4C0 1643 aa34.72■■■■□ 3.15
RFFL-206ENST00000447669 POLR1AO95602 1720 aaPredicted RBP34.72■■■■□ 3.15
RFFL-206ENST00000447669 KDM4FA0A1W2PPD8 638 aa34.71■■■■□ 3.15
RFFL-206ENST00000447669 HDGFP51858 240 aaKnown RBP34.71■■■■□ 3.15
RFFL-206ENST00000447669 MIER1Q8N108 512 aa34.68■■■■□ 3.14
RFFL-206ENST00000447669 DISP3Q9P2K9 1392 aa34.68■■■■□ 3.14
RFFL-206ENST00000447669 SLIT1O75093 1534 aa34.67■■■■□ 3.14
RFFL-206ENST00000447669 ARHGAP23Q9P227 1491 aa34.66■■■■□ 3.14
RFFL-206ENST00000447669 SETD1AO15047 1707 aaKnown RBP34.65■■■■□ 3.14
RFFL-206ENST00000447669 EID1Q9Y6B2 187 aa34.65■■■■□ 3.14
RFFL-206ENST00000447669 EIF3AQ14152 1382 aaKnown RBP34.65■■■■□ 3.14
RFFL-206ENST00000447669 ZNF142P52746 1687 aaPredicted RBP34.62■■■■□ 3.13
RFFL-206ENST00000447669 METP08581 1390 aa34.62■■■■□ 3.13
RFFL-206ENST00000447669 YTHDC2Q9H6S0 1430 aaKnown RBP34.6■■■■□ 3.13
RFFL-206ENST00000447669 SAFB2Q14151 953 aaKnown RBP eCLIP34.6■■■■□ 3.13
RFFL-206ENST00000447669 SLC26A8Q96RN1 970 aa34.6■■■■□ 3.13
RFFL-206ENST00000447669 ARHGEF28Q8N1W1 1705 aaKnown RBP34.59■■■■□ 3.13
RFFL-206ENST00000447669 CENPJQ9HC77 1338 aaPredicted RBP34.58■■■■□ 3.13
RFFL-206ENST00000447669 PLEKHG1Q9ULL1 1385 aa34.58■■■■□ 3.13
RFFL-206ENST00000447669 TMF1P82094 1093 aa34.57■■■■□ 3.13
RFFL-206ENST00000447669 ADAMTS13Q76LX8 1427 aa34.57■■■■□ 3.13
RFFL-206ENST00000447669 QRICH2Q9H0J4 1663 aa34.53■■■■□ 3.12
RFFL-206ENST00000447669 PRAM1Q96QH2 718 aa34.5■■■■□ 3.11
RFFL-206ENST00000447669 WAPLQ7Z5K2 1190 aa34.48■■■■□ 3.11
RFFL-206ENST00000447669 ANKLE2Q86XL3 938 aa34.47■■■■□ 3.11
RFFL-206ENST00000447669 LRPPRCP42704 1394 aaKnown RBP34.46■■■■□ 3.11
RFFL-206ENST00000447669 MED14O60244 1454 aa34.45■■■■□ 3.11
RFFL-206ENST00000447669 POGKQ9P215 609 aa34.45■■■■□ 3.1
RFFL-206ENST00000447669 PLEKHH1Q9ULM0 1364 aa34.43■■■■□ 3.1
RFFL-206ENST00000447669 MINK1Q8N4C8 1332 aaPredicted RBP34.41■■■■□ 3.1
RFFL-206ENST00000447669 NCKAP5LQ9HCH0 1330 aa34.41■■■■□ 3.1
RFFL-206ENST00000447669 ABCC11Q96J66 1382 aa34.4■■■■□ 3.1
RFFL-206ENST00000447669 SBNO2Q9Y2G9 1366 aa34.4■■■■□ 3.1
RFFL-206ENST00000447669 CNGB1Q14028 1251 aaPredicted RBP34.4■■■■□ 3.1
RFFL-206ENST00000447669 PTPRUQ92729 1446 aa34.39■■■■□ 3.1
RFFL-206ENST00000447669 TBX22Q9Y458 520 aa34.38■■■■□ 3.09
RFFL-206ENST00000447669 HSPA2P54652 639 aa34.38■■■■□ 3.09
RFFL-206ENST00000447669 TULP4Q9NRJ4 1543 aa34.34■■■■□ 3.09
RFFL-206ENST00000447669 DLC1Q96QB1 1528 aa34.33■■■■□ 3.09
RFFL-206ENST00000447669 ROBO2Q9HCK4 1378 aa34.33■■■■□ 3.09
RFFL-206ENST00000447669 ANP32CO43423 234 aa34.33■■■■□ 3.09
RFFL-206ENST00000447669 CDCA8Q53HL2 280 aa34.33■■■■□ 3.09
RFFL-206ENST00000447669 AMOTL2Q9Y2J4 779 aa34.32■■■■□ 3.08
RFFL-206ENST00000447669 PANK3Q9H999 370 aa34.31■■■■□ 3.08
RFFL-206ENST00000447669 CABP2Q9NPB3 220 aa34.31■■■■□ 3.08
RFFL-206ENST00000447669 KNDC1Q76NI1 1749 aa34.3■■■■□ 3.08
RFFL-206ENST00000447669 MYOM1P52179 1685 aa34.29■■■■□ 3.08
RFFL-206ENST00000447669 EVC2Q86UK5 1308 aa34.29■■■■□ 3.08
RFFL-206ENST00000447669 SLC24A1O60721 1099 aa34.28■■■■□ 3.08
RFFL-206ENST00000447669 TECPR2O15040 1411 aa34.28■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms