RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 ERBINQ96RT1 1412 aa7.22□□□□□ -1.25
LMO3-209ENST00000447609 EIF5BO60841 1220 aaKnown RBP7.22□□□□□ -1.25
LMO3-209ENST00000447609 PAK3O75914 559 aaPredicted RBP7.22□□□□□ -1.25
LMO3-209ENST00000447609 CDC42BPBQ9Y5S2 1711 aa7.22□□□□□ -1.25
LMO3-209ENST00000447609 SHANK2Q9UPX8 1470 aa7.21□□□□□ -1.26
LMO3-209ENST00000447609 UHRF1BP1Q6BDS2 1440 aa7.21□□□□□ -1.26
LMO3-209ENST00000447609 LRRIQ1Q96JM4 1722 aa7.21□□□□□ -1.26
LMO3-209ENST00000447609 TCERG1O14776 1098 aaKnown RBP7.21□□□□□ -1.26
LMO3-209ENST00000447609 PPRC1Q5VV67 1664 aaKnown RBP7.2□□□□□ -1.26
LMO3-209ENST00000447609 ARHGEF5Q12774 1597 aa7.2□□□□□ -1.26
LMO3-209ENST00000447609 DNMT1P26358 1616 aaKnown RBP7.2□□□□□ -1.26
LMO3-209ENST00000447609 IL27Q8NEV9 243 aa7.2□□□□□ -1.26
LMO3-209ENST00000447609 CARD11Q9BXL7 1154 aa7.2□□□□□ -1.26
LMO3-209ENST00000447609 MRS2Q9HD23 443 aa7.2□□□□□ -1.26
LMO3-209ENST00000447609 LMOD2Q6P5Q4 547 aa7.19□□□□□ -1.26
LMO3-209ENST00000447609 PROSER2Q86WR7 435 aaPredicted RBP7.19□□□□□ -1.26
LMO3-209ENST00000447609 RTN4Q9NQC3 1192 aaKnown RBP7.19□□□□□ -1.26
LMO3-209ENST00000447609 SMG6Q86US8 1419 aaKnown RBP7.19□□□□□ -1.26
LMO3-209ENST00000447609 MS4A1P11836 297 aa7.19□□□□□ -1.26
LMO3-209ENST00000447609 HAP1P54257 671 aaPredicted RBP7.19□□□□□ -1.26
LMO3-209ENST00000447609 EIF4G2P78344 907 aaKnown RBP eCLIP7.19□□□□□ -1.26
LMO3-209ENST00000447609 NCKAP5LQ9HCH0 1330 aa7.18□□□□□ -1.26
LMO3-209ENST00000447609 KDM4FA0A1W2PPD8 638 aa7.18□□□□□ -1.26
LMO3-209ENST00000447609 NUTM2FA1L443 756 aa7.18□□□□□ -1.26
LMO3-209ENST00000447609 L3MBTL2Q969R5 705 aa7.18□□□□□ -1.26
LMO3-209ENST00000447609 FAM135AQ9P2D6 1515 aa7.18□□□□□ -1.26
LMO3-209ENST00000447609 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.17□□□□□ -1.26
LMO3-209ENST00000447609 TRAK1Q9UPV9 953 aa7.17□□□□□ -1.26
LMO3-209ENST00000447609 CFAP65Q6ZU64 1925 aaKnown RBP7.17□□□□□ -1.26
LMO3-209ENST00000447609 FAM9BQ8IZU0 186 aa7.17□□□□□ -1.26
LMO3-209ENST00000447609 TMC1Q8TDI8 760 aa7.17□□□□□ -1.26
LMO3-209ENST00000447609 HIRIP3Q9BW71 556 aaPredicted RBP7.17□□□□□ -1.26
LMO3-209ENST00000447609 NUDCQ9Y266 331 aa7.17□□□□□ -1.26
LMO3-209ENST00000447609 GSE1Q14687 1217 aa7.17□□□□□ -1.26
LMO3-209ENST00000447609 SAMD1Q6SPF0 538 aaPredicted RBP7.16□□□□□ -1.26
LMO3-209ENST00000447609 DSG3P32926 999 aa7.16□□□□□ -1.26
LMO3-209ENST00000447609 SRPK2P78362 688 aaKnown RBP7.16□□□□□ -1.26
LMO3-209ENST00000447609 ADGRL2O95490 1459 aa7.15□□□□□ -1.26
LMO3-209ENST00000447609 ATF3P18847 181 aa7.15□□□□□ -1.26
LMO3-209ENST00000447609 TMEM132EQ6IEE7 984 aa7.15□□□□□ -1.26
LMO3-209ENST00000447609 ARHGEF40Q8TER5 1519 aa7.15□□□□□ -1.27
LMO3-209ENST00000447609 NPM2Q86SE8 214 aaKnown RBP7.15□□□□□ -1.27
LMO3-209ENST00000447609 FAM43AQ8N2R8 423 aa7.15□□□□□ -1.27
LMO3-209ENST00000447609 DIP2CQ9Y2E4 1556 aa7.14□□□□□ -1.27
LMO3-209ENST00000447609 ZBTB7CA1YPR0 619 aa7.14□□□□□ -1.27
LMO3-209ENST00000447609 PIP4K2BP78356 416 aa7.14□□□□□ -1.27
LMO3-209ENST00000447609 PRKRIP1Q9H875 184 aaPredicted RBP7.14□□□□□ -1.27
LMO3-209ENST00000447609 CFAP70Q5T0N1 1121 aa7.14□□□□□ -1.27
LMO3-209ENST00000447609 PKNOX2Q96KN3 472 aa7.14□□□□□ -1.27
LMO3-209ENST00000447609 RPGRIP1LQ68CZ1 1315 aa7.14□□□□□ -1.27
LMO3-209ENST00000447609 LAS1LQ9Y4W2 734 aaKnown RBP7.13□□□□□ -1.27
LMO3-209ENST00000447609 ROCK2O75116 1388 aaKnown RBP7.13□□□□□ -1.27
LMO3-209ENST00000447609 RBM33Q96EV2 1170 aaKnown RBP7.13□□□□□ -1.27
LMO3-209ENST00000447609 PTPRMP28827 1452 aa7.13□□□□□ -1.27
LMO3-209ENST00000447609 RNF123Q5XPI4 1314 aa7.13□□□□□ -1.27
LMO3-209ENST00000447609 HSPA5P11021 654 aaKnown RBP7.12□□□□□ -1.27
LMO3-209ENST00000447609 STAC3Q96MF2 364 aa7.12□□□□□ -1.27
LMO3-209ENST00000447609 KDM5CP41229 1560 aa7.12□□□□□ -1.27
LMO3-209ENST00000447609 KDM5DQ9BY66 1539 aa7.12□□□□□ -1.27
LMO3-209ENST00000447609 MINK1Q8N4C8 1332 aaPredicted RBP7.12□□□□□ -1.27
LMO3-209ENST00000447609 ABCA6Q8N139 1617 aa7.12□□□□□ -1.27
LMO3-209ENST00000447609 ZMYM4Q5VZL5 1548 aa7.12□□□□□ -1.27
LMO3-209ENST00000447609 NPATQ14207 1427 aa7.12□□□□□ -1.27
LMO3-209ENST00000447609 KIDINS220Q9ULH0 1771 aa7.12□□□□□ -1.27
LMO3-209ENST00000447609 ADGBQ8N7X0 1667 aa7.11□□□□□ -1.27
LMO3-209ENST00000447609 ANKRD30BQ9BXX2 1392 aa7.11□□□□□ -1.27
LMO3-209ENST00000447609 ZNF219Q9P2Y4 722 aaPredicted RBP7.11□□□□□ -1.27
LMO3-209ENST00000447609 UBAP1LF5GYI3 381 aa7.11□□□□□ -1.27
LMO3-209ENST00000447609 PDE4AP27815 886 aa7.11□□□□□ -1.27
LMO3-209ENST00000447609 CDCA8Q53HL2 280 aa7.11□□□□□ -1.27
LMO3-209ENST00000447609 AMOTL2Q9Y2J4 779 aa7.11□□□□□ -1.27
LMO3-209ENST00000447609 RIMS2Q9UQ26 1411 aa7.11□□□□□ -1.27
LMO3-209ENST00000447609 CCDC7Q96M83 1385 aa7.1□□□□□ -1.27
LMO3-209ENST00000447609 L1TD1Q5T7N2 865 aaKnown RBP7.1□□□□□ -1.27
LMO3-209ENST00000447609 NGDNQ8NEJ9 315 aaKnown RBP7.1□□□□□ -1.27
LMO3-209ENST00000447609 AGLP35573 1532 aa7.1□□□□□ -1.27
LMO3-209ENST00000447609 MYCNP04198 464 aaPredicted RBP7.1□□□□□ -1.27
LMO3-209ENST00000447609 MAST1Q9Y2H9 1570 aa7.1□□□□□ -1.27
LMO3-209ENST00000447609 RICTORQ6R327 1708 aa7.1□□□□□ -1.27
LMO3-209ENST00000447609 RIMS1Q86UR5 1692 aaKnown RBP7.1□□□□□ -1.27
LMO3-209ENST00000447609 INO80Q9ULG1 1556 aaPredicted RBP7.09□□□□□ -1.27
LMO3-209ENST00000447609 SLC24A1O60721 1099 aa7.09□□□□□ -1.27
LMO3-209ENST00000447609 PLXNC1O60486 1568 aa7.09□□□□□ -1.27
LMO3-209ENST00000447609 TMF1P82094 1093 aa7.09□□□□□ -1.27
LMO3-209ENST00000447609 BACH2Q9BYV9 841 aa7.09□□□□□ -1.27
LMO3-209ENST00000447609 ADGRF5Q8IZF2 1346 aa7.09□□□□□ -1.28
LMO3-209ENST00000447609 NOS1P29475 1434 aa7.08□□□□□ -1.28
LMO3-209ENST00000447609 TOM1O60784 492 aa7.08□□□□□ -1.28
LMO3-209ENST00000447609 LTKP29376 864 aa7.08□□□□□ -1.28
LMO3-209ENST00000447609 ABCC3O15438 1527 aa7.08□□□□□ -1.28
LMO3-209ENST00000447609 EIF3AQ14152 1382 aaKnown RBP7.08□□□□□ -1.28
LMO3-209ENST00000447609 PZPP20742 1482 aa7.08□□□□□ -1.28
LMO3-209ENST00000447609 PDE3BQ13370 1112 aa7.08□□□□□ -1.28
LMO3-209ENST00000447609 PRAM1Q96QH2 718 aa7.08□□□□□ -1.28
LMO3-209ENST00000447609 BRPF3Q9ULD4 1205 aa7.08□□□□□ -1.28
LMO3-209ENST00000447609 MADDQ8WXG6 1647 aa7.08□□□□□ -1.28
LMO3-209ENST00000447609 ERVK-7P63135 1459 aa7.07□□□□□ -1.28
LMO3-209ENST00000447609 TMEM2Q9UHN6 1383 aa7.07□□□□□ -1.28
LMO3-209ENST00000447609 SOX12O15370 315 aa7.07□□□□□ -1.28
LMO3-209ENST00000447609 UGGT1Q9NYU2 1555 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms