RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 CCDC66A2RUB6 948 aa22.8■■□□□ 1.24
SHANK3-203ENST00000445220 ARGLU1Q9NWB6 273 aaPredicted RBP22.79■■□□□ 1.24
SHANK3-203ENST00000445220 FGD6Q6ZV73 1430 aa22.79■■□□□ 1.24
SHANK3-203ENST00000445220 TRAK1Q9UPV9 953 aa22.78■■□□□ 1.24
SHANK3-203ENST00000445220 H3BQV1 296 aa22.78■■□□□ 1.24
SHANK3-203ENST00000445220 REC8O95072 547 aa22.78■■□□□ 1.24
SHANK3-203ENST00000445220 IFFO2Q5TF58 517 aa22.78■■□□□ 1.24
SHANK3-203ENST00000445220 CSB-PGBD3P0DP91 1061 aa22.77■■□□□ 1.24
SHANK3-203ENST00000445220 STAC3Q96MF2 364 aa22.77■■□□□ 1.24
SHANK3-203ENST00000445220 CREBRFQ8IUR6 639 aa22.77■■□□□ 1.24
SHANK3-203ENST00000445220 PODXL2Q9NZ53 605 aa22.76■■□□□ 1.23
SHANK3-203ENST00000445220 TSR1Q2NL82 804 aaKnown RBP22.76■■□□□ 1.23
SHANK3-203ENST00000445220 CHMP4CQ96CF2 233 aa22.76■■□□□ 1.23
SHANK3-203ENST00000445220 TPM1P09493 284 aa22.76■■□□□ 1.23
SHANK3-203ENST00000445220 SLC4A10Q6U841 1118 aa22.76■■□□□ 1.23
SHANK3-203ENST00000445220 NGEFQ8N5V2 710 aa22.76■■□□□ 1.23
SHANK3-203ENST00000445220 TRAK2O60296 914 aa22.75■■□□□ 1.23
SHANK3-203ENST00000445220 HOMER1Q86YM7 354 aa22.75■■□□□ 1.23
SHANK3-203ENST00000445220 NGDNQ8NEJ9 315 aaKnown RBP22.75■■□□□ 1.23
SHANK3-203ENST00000445220 EVC2Q86UK5 1308 aa22.74■■□□□ 1.23
SHANK3-203ENST00000445220 RRP9O43818 475 aaKnown RBP22.74■■□□□ 1.23
SHANK3-203ENST00000445220 BCL2L13Q9BXK5 485 aa22.74■■□□□ 1.23
SHANK3-203ENST00000445220 KIF21BO75037 1637 aa22.74■■□□□ 1.23
SHANK3-203ENST00000445220 C22orf23Q9BZE7 217 aa22.74■■□□□ 1.23
SHANK3-203ENST00000445220 CALRP27797 417 aaKnown RBP22.73■■□□□ 1.23
SHANK3-203ENST00000445220 FAM184AQ8NB25 1140 aa22.73■■□□□ 1.23
SHANK3-203ENST00000445220 IFT57Q9NWB7 429 aa22.73■■□□□ 1.23
SHANK3-203ENST00000445220 MCTP1Q6DN14 999 aa22.73■■□□□ 1.23
SHANK3-203ENST00000445220 RASSF8Q8NHQ8 419 aa22.73■■□□□ 1.23
SHANK3-203ENST00000445220 FRAT2O75474 233 aaPredicted RBP22.72■■□□□ 1.23
SHANK3-203ENST00000445220 HMGN5P82970 282 aaKnown RBP22.72■■□□□ 1.23
SHANK3-203ENST00000445220 RILPL2Q969X0 211 aa22.71■■□□□ 1.23
SHANK3-203ENST00000445220 DDX19BQ9UMR2 479 aa22.71■■□□□ 1.23
SHANK3-203ENST00000445220 IFT140Q96RY7 1462 aa22.71■■□□□ 1.23
SHANK3-203ENST00000445220 RAD54L2Q9Y4B4 1467 aa22.71■■□□□ 1.23
SHANK3-203ENST00000445220 AMPHP49418 695 aa22.7■■□□□ 1.23
SHANK3-203ENST00000445220 LRRC9Q6ZRR7 1453 aa22.7■■□□□ 1.22
SHANK3-203ENST00000445220 CCDC173Q0VFZ6 552 aa22.7■■□□□ 1.22
SHANK3-203ENST00000445220 TPD52L1Q16890 204 aaPredicted RBP22.7■■□□□ 1.22
SHANK3-203ENST00000445220 NUTM2DQ5VT03 806 aaPredicted RBP22.7■■□□□ 1.22
SHANK3-203ENST00000445220 MNS1Q8NEH6 495 aa22.7■■□□□ 1.22
SHANK3-203ENST00000445220 CWC15Q9P013 229 aaKnown RBP22.7■■□□□ 1.22
SHANK3-203ENST00000445220 RRP7AQ9Y3A4 280 aaKnown RBP22.7■■□□□ 1.22
SHANK3-203ENST00000445220 ACBD3Q9H3P7 528 aa22.69■■□□□ 1.22
SHANK3-203ENST00000445220 CASKIN1Q8WXD9 1431 aa22.69■■□□□ 1.22
SHANK3-203ENST00000445220 GORABQ5T7V8 394 aa22.68■■□□□ 1.22
SHANK3-203ENST00000445220 ERICH3Q5RHP9 1530 aa22.68■■□□□ 1.22
SHANK3-203ENST00000445220 ISY1Q9ULR0 285 aaKnown RBP22.67■■□□□ 1.22
SHANK3-203ENST00000445220 AAMPQ13685 434 aa22.67■■□□□ 1.22
SHANK3-203ENST00000445220 FYCO1Q9BQS8 1478 aa22.67■■□□□ 1.22
SHANK3-203ENST00000445220 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.66■■□□□ 1.227e-7■■□□□ 12.8
SHANK3-203ENST00000445220 PES1O00541 588 aaKnown RBP22.66■■□□□ 1.22
SHANK3-203ENST00000445220 RBM10P98175 930 aaKnown RBP22.66■■□□□ 1.22
SHANK3-203ENST00000445220 HSP90B2PQ58FF3 399 aa22.65■■□□□ 1.22
SHANK3-203ENST00000445220 CEP89Q96ST8 783 aa22.64■■□□□ 1.22
SHANK3-203ENST00000445220 CCDC9Q9Y3X0 531 aaKnown RBP22.64■■□□□ 1.22
SHANK3-203ENST00000445220 BICD2Q8TD16 824 aa22.64■■□□□ 1.21
SHANK3-203ENST00000445220 SASS6Q6UVJ0 657 aa22.63■■□□□ 1.21
SHANK3-203ENST00000445220 GRIN2BQ13224 1484 aa22.63■■□□□ 1.21
SHANK3-203ENST00000445220 DZIP1LQ8IYY4 767 aaKnown RBP22.63■■□□□ 1.21
SHANK3-203ENST00000445220 IPO7O95373 1038 aaKnown RBP22.63■■□□□ 1.21
SHANK3-203ENST00000445220 APPP05067 770 aa22.63■■□□□ 1.21
SHANK3-203ENST00000445220 COG3Q96JB2 828 aa22.62■■□□□ 1.21
SHANK3-203ENST00000445220 APAF1O14727 1248 aa22.62■■□□□ 1.21
SHANK3-203ENST00000445220 PHF23Q9BUL5 403 aaPredicted RBP22.62■■□□□ 1.21
SHANK3-203ENST00000445220 MIA2Q96PC5 1412 aa22.61■■□□□ 1.21
SHANK3-203ENST00000445220 CHMP3Q9Y3E7 222 aa22.61■■□□□ 1.21
SHANK3-203ENST00000445220 PATL2C9JE40 543 aaKnown RBP22.6■■□□□ 1.21
SHANK3-203ENST00000445220 ZKSCAN1P17029 563 aaPredicted RBP22.6■■□□□ 1.21
SHANK3-203ENST00000445220 RUFY2Q8WXA3 655 aa22.6■■□□□ 1.21
SHANK3-203ENST00000445220 MBD3O95983 291 aa22.6■■□□□ 1.21
SHANK3-203ENST00000445220 INTS3Q68E01 1043 aaKnown RBP22.6■■□□□ 1.21
SHANK3-203ENST00000445220 RNF214Q8ND24 703 aa22.6■■□□□ 1.21
SHANK3-203ENST00000445220 AK7Q96M32 723 aa22.59■■□□□ 1.21
SHANK3-203ENST00000445220 CCDC7Q96M83 1385 aa22.59■■□□□ 1.21
SHANK3-203ENST00000445220 NCOA2Q15596 1464 aa22.59■■□□□ 1.21
SHANK3-203ENST00000445220 ANKRD50Q9ULJ7 1429 aa22.58■■□□□ 1.21
SHANK3-203ENST00000445220 PDE4CQ08493 712 aa22.58■■□□□ 1.2
SHANK3-203ENST00000445220 CAVIN1Q6NZI2 390 aaKnown RBP22.57■■□□□ 1.2
SHANK3-203ENST00000445220 SMC3Q9UQE7 1217 aa22.57■■□□□ 1.2
SHANK3-203ENST00000445220 ZNF330Q9Y3S2 320 aaPredicted RBP22.56■■□□□ 1.2
SHANK3-203ENST00000445220 RUFY1Q96T51 708 aa22.56■■□□□ 1.2
SHANK3-203ENST00000445220 BACH2Q9BYV9 841 aa22.56■■□□□ 1.2
SHANK3-203ENST00000445220 MEX3CQ5U5Q3 659 aaKnown RBP22.55■■□□□ 1.2
SHANK3-203ENST00000445220 LETM1O95202 739 aaPredicted RBP22.55■■□□□ 1.2
SHANK3-203ENST00000445220 ANKRD20A12PQ8NF67 263 aa22.55■■□□□ 1.2
SHANK3-203ENST00000445220 VPS37CA5D8V6 355 aaPredicted RBP22.55■■□□□ 1.2
SHANK3-203ENST00000445220 ESPNB1AK53 854 aa22.54■■□□□ 1.2
SHANK3-203ENST00000445220 CFTRP13569 1480 aa22.54■■□□□ 1.2
SHANK3-203ENST00000445220 TAF7LQ5H9L4 462 aa22.54■■□□□ 1.2
SHANK3-203ENST00000445220 ANO2Q9NQ90 1003 aa22.54■■□□□ 1.2
SHANK3-203ENST00000445220 CDR1P51861 262 aa22.54■■□□□ 1.2
SHANK3-203ENST00000445220 GRPEL1Q9HAV7 217 aa22.54■■□□□ 1.2
SHANK3-203ENST00000445220 ELL2O00472 640 aaPredicted RBP22.53■■□□□ 1.2
SHANK3-203ENST00000445220 CNTLNQ9NXG0 1405 aa22.53■■□□□ 1.2
SHANK3-203ENST00000445220 HMGXB3Q12766 1538 aa22.53■■□□□ 1.2
SHANK3-203ENST00000445220 PRG4Q92954 1404 aaPredicted RBP22.53■■□□□ 1.2
SHANK3-203ENST00000445220 RRBP1Q9P2E9 1410 aaKnown RBP22.52■■□□□ 1.2
SHANK3-203ENST00000445220 TSPY26PQ9H489 355 aa22.52■■□□□ 1.2
SHANK3-203ENST00000445220 KIF7Q2M1P5 1343 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms