RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 KDM6BO15054 1643 aa13.59□□□□□ -0.23
TOP3B-210ENST00000444502 NUTM2GQ5VZR2 741 aa13.59□□□□□ -0.23
TOP3B-210ENST00000444502 CCDC9Q9Y3X0 531 aaKnown RBP13.58□□□□□ -0.23
TOP3B-210ENST00000444502 CRBNQ96SW2 442 aa13.58□□□□□ -0.24
TOP3B-210ENST00000444502 FBXO31Q5XUX0 539 aaPredicted RBP13.58□□□□□ -0.24
TOP3B-210ENST00000444502 RTF1Q92541 710 aaKnown RBP13.58□□□□□ -0.24
TOP3B-210ENST00000444502 ADGRL1O94910 1474 aa13.58□□□□□ -0.24
TOP3B-210ENST00000444502 PZPP20742 1482 aa13.58□□□□□ -0.24
TOP3B-210ENST00000444502 NUP160Q12769 1436 aa13.57□□□□□ -0.24
TOP3B-210ENST00000444502 ZNF330Q9Y3S2 320 aaPredicted RBP13.56□□□□□ -0.24
TOP3B-210ENST00000444502 PPP2R1AP30153 589 aa13.56□□□□□ -0.24
TOP3B-210ENST00000444502 CLUAP1Q96AJ1 413 aa13.56□□□□□ -0.24
TOP3B-210ENST00000444502 HSP90AA1P07900 732 aaKnown RBP13.56□□□□□ -0.24
TOP3B-210ENST00000444502 GGNBP2Q9H3C7 697 aa13.56□□□□□ -0.24
TOP3B-210ENST00000444502 UPF2Q9HAU5 1272 aaKnown RBP13.55□□□□□ -0.24
TOP3B-210ENST00000444502 CEP170Q5SW79 1584 aa13.55□□□□□ -0.24
TOP3B-210ENST00000444502 BCL2L13Q9BXK5 485 aa13.55□□□□□ -0.24
TOP3B-210ENST00000444502 PRAM1Q96QH2 718 aa13.54□□□□□ -0.24
TOP3B-210ENST00000444502 PNNQ9H307 717 aaKnown RBP13.54□□□□□ -0.24
TOP3B-210ENST00000444502 ERBINQ96RT1 1412 aa13.54□□□□□ -0.24
TOP3B-210ENST00000444502 SLC12A5Q9H2X9 1139 aa13.54□□□□□ -0.24
TOP3B-210ENST00000444502 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.53□□□□□ -0.24
TOP3B-210ENST00000444502 DNMT1P26358 1616 aaKnown RBP13.53□□□□□ -0.24
TOP3B-210ENST00000444502 COG3Q96JB2 828 aa13.53□□□□□ -0.24
TOP3B-210ENST00000444502 FANCAO15360 1455 aa13.53□□□□□ -0.24
TOP3B-210ENST00000444502 ELL2O00472 640 aaPredicted RBP13.53□□□□□ -0.24
TOP3B-210ENST00000444502 PMFBP1Q8TBY8 1022 aa13.52□□□□□ -0.24
TOP3B-210ENST00000444502 CGNL1Q0VF96 1302 aa13.52□□□□□ -0.25
TOP3B-210ENST00000444502 RBM33Q96EV2 1170 aaKnown RBP13.52□□□□□ -0.25
TOP3B-210ENST00000444502 ZMYND15Q9H091 742 aa13.52□□□□□ -0.25
TOP3B-210ENST00000444502 RSPH6AQ9H0K4 717 aa13.52□□□□□ -0.25
TOP3B-210ENST00000444502 ASXL2Q76L83 1435 aa13.52□□□□□ -0.25
TOP3B-210ENST00000444502 SYCP2Q9BX26 1530 aa13.52□□□□□ -0.25
TOP3B-210ENST00000444502 TCERG1O14776 1098 aaKnown RBP13.52□□□□□ -0.25
TOP3B-210ENST00000444502 PSME1Q06323 249 aa13.52□□□□□ -0.25
TOP3B-210ENST00000444502 AEBP2Q6ZN18 517 aaPredicted RBP13.51□□□□□ -0.25
TOP3B-210ENST00000444502 SLC52A1Q9NWF4 448 aa13.51□□□□□ -0.25
TOP3B-210ENST00000444502 STAC3Q96MF2 364 aa13.5□□□□□ -0.25
TOP3B-210ENST00000444502 DISP3Q9P2K9 1392 aa13.5□□□□□ -0.25
TOP3B-210ENST00000444502 NPHP1O15259 732 aa13.5□□□□□ -0.25
TOP3B-210ENST00000444502 TEX14Q8IWB6 1497 aa13.5□□□□□ -0.25
TOP3B-210ENST00000444502 ITSN2Q9NZM3 1697 aa13.49□□□□□ -0.25
TOP3B-210ENST00000444502 ADGRF5Q8IZF2 1346 aa13.49□□□□□ -0.25
TOP3B-210ENST00000444502 TRAPPC8Q9Y2L5 1435 aa13.49□□□□□ -0.25
TOP3B-210ENST00000444502 APBB1O00213 710 aa13.49□□□□□ -0.25
TOP3B-210ENST00000444502 IDI1Q13907 227 aa13.49□□□□□ -0.25
TOP3B-210ENST00000444502 THEMISQ8N1K5 641 aaPredicted RBP13.48□□□□□ -0.25
TOP3B-210ENST00000444502 SMG6Q86US8 1419 aaKnown RBP13.48□□□□□ -0.25
TOP3B-210ENST00000444502 HSP90AA2PQ14568 343 aaPredicted RBP13.48□□□□□ -0.25
TOP3B-210ENST00000444502 PDE4AP27815 886 aa13.47□□□□□ -0.25
TOP3B-210ENST00000444502 DDRGK1Q96HY6 314 aa13.47□□□□□ -0.25
TOP3B-210ENST00000444502 PROSER2Q86WR7 435 aaPredicted RBP13.47□□□□□ -0.25
TOP3B-210ENST00000444502 COG6Q9Y2V7 657 aa13.47□□□□□ -0.25
TOP3B-210ENST00000444502 MTHFSP49914 203 aa13.46□□□□□ -0.25
TOP3B-210ENST00000444502 PLCH2O75038 1416 aa13.46□□□□□ -0.25
TOP3B-210ENST00000444502 ATF3P18847 181 aa13.46□□□□□ -0.25
TOP3B-210ENST00000444502 FAM135AQ9P2D6 1515 aa13.46□□□□□ -0.26
TOP3B-210ENST00000444502 HMOX1P09601 288 aa13.45□□□□□ -0.26
TOP3B-210ENST00000444502 E9PSI1 815 aa13.45□□□□□ -0.26
TOP3B-210ENST00000444502 NLRP6P59044 892 aa13.45□□□□□ -0.26
TOP3B-210ENST00000444502 DHX29Q7Z478 1369 aaKnown RBP13.45□□□□□ -0.26
TOP3B-210ENST00000444502 RALGAPBQ86X10 1494 aa13.44□□□□□ -0.26
TOP3B-210ENST00000444502 GSE1Q14687 1217 aa13.44□□□□□ -0.26
TOP3B-210ENST00000444502 ESCO1Q5FWF5 840 aa13.44□□□□□ -0.26
TOP3B-210ENST00000444502 WAPLQ7Z5K2 1190 aa13.44□□□□□ -0.26
TOP3B-210ENST00000444502 TESK2Q96S53 571 aa13.44□□□□□ -0.26
TOP3B-210ENST00000444502 DENND4BO75064 1496 aaPredicted RBP13.44□□□□□ -0.26
TOP3B-210ENST00000444502 CABP1Q9NZU7 370 aa13.43□□□□□ -0.26
TOP3B-210ENST00000444502 GCC2Q8IWJ2 1684 aa13.43□□□□□ -0.26
TOP3B-210ENST00000444502 ADGRL2O95490 1459 aa13.43□□□□□ -0.26
TOP3B-210ENST00000444502 SKAP1Q86WV1 359 aa13.43□□□□□ -0.26
TOP3B-210ENST00000444502 PRAG1Q86YV5 1406 aa13.43□□□□□ -0.26
TOP3B-210ENST00000444502 SMC4Q9NTJ3 1288 aa13.43□□□□□ -0.26
TOP3B-210ENST00000444502 XPCQ01831 940 aaPredicted RBP13.42□□□□□ -0.26
TOP3B-210ENST00000444502 OS9Q13438 667 aaPredicted RBP13.42□□□□□ -0.26
TOP3B-210ENST00000444502 SLC4A3P48751 1232 aa13.42□□□□□ -0.26
TOP3B-210ENST00000444502 ITPRIPQ8IWB1 547 aa13.41□□□□□ -0.26
TOP3B-210ENST00000444502 BCAR3O75815 825 aa13.41□□□□□ -0.26
TOP3B-210ENST00000444502 ANKLE2Q86XL3 938 aa13.41□□□□□ -0.26
TOP3B-210ENST00000444502 TCP11L2Q8N4U5 519 aa13.41□□□□□ -0.26
TOP3B-210ENST00000444502 USP35Q9P2H5 1018 aa13.41□□□□□ -0.26
TOP3B-210ENST00000444502 SPATA31E1Q6ZUB1 1445 aa13.41□□□□□ -0.26
TOP3B-210ENST00000444502 CDK19Q9BWU1 502 aa13.41□□□□□ -0.26
TOP3B-210ENST00000444502 SLC4A10Q6U841 1118 aa13.4□□□□□ -0.26
TOP3B-210ENST00000444502 EVA1CP58658 441 aa13.4□□□□□ -0.26
TOP3B-210ENST00000444502 PANK1Q8TE04 598 aa13.4□□□□□ -0.26
TOP3B-210ENST00000444502 ABCC10Q5T3U5 1492 aa13.4□□□□□ -0.26
TOP3B-210ENST00000444502 DIAPH1O60610 1272 aaKnown RBP13.4□□□□□ -0.26
TOP3B-210ENST00000444502 SHANK2Q9UPX8 1470 aa13.39□□□□□ -0.27
TOP3B-210ENST00000444502 C20orf194Q5TEA3 1177 aa13.39□□□□□ -0.27
TOP3B-210ENST00000444502 ABTB2Q8N961 1025 aa13.39□□□□□ -0.27
TOP3B-210ENST00000444502 RUNDC1Q96C34 613 aa13.39□□□□□ -0.27
TOP3B-210ENST00000444502 POGZQ7Z3K3 1410 aa13.39□□□□□ -0.27
TOP3B-210ENST00000444502 PER1O15534 1290 aaPredicted RBP13.39□□□□□ -0.27
TOP3B-210ENST00000444502 LRRIQ1Q96JM4 1722 aa13.39□□□□□ -0.27
TOP3B-210ENST00000444502 MBD5Q9P267 1494 aa13.38□□□□□ -0.27
TOP3B-210ENST00000444502 NECTIN2Q92692 538 aa13.38□□□□□ -0.27
TOP3B-210ENST00000444502 CENPQQ7L2Z9 268 aaPredicted RBP13.38□□□□□ -0.27
TOP3B-210ENST00000444502 ARID3AQ99856 593 aa13.38□□□□□ -0.27
TOP3B-210ENST00000444502 WDR7Q9Y4E6 1490 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms