RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 STAG3Q9UJ98 1225 aa13.36□□□□□ -0.27
SMPD4P1-203ENST00000443839 RPGRIP1LQ68CZ1 1315 aa13.36□□□□□ -0.27
SMPD4P1-203ENST00000443839 PPLO60437 1756 aa13.35□□□□□ -0.27
SMPD4P1-203ENST00000443839 TMEM131LA2VDJ0 1609 aa13.35□□□□□ -0.27
SMPD4P1-203ENST00000443839 NBPF1Q3BBV0 1214 aa13.34□□□□□ -0.27
SMPD4P1-203ENST00000443839 ADGRF5Q8IZF2 1346 aa13.34□□□□□ -0.27
SMPD4P1-203ENST00000443839 GPRASP1Q5JY77 1395 aa13.34□□□□□ -0.27
SMPD4P1-203ENST00000443839 MYO5BQ9ULV0 1848 aa13.33□□□□□ -0.27
SMPD4P1-203ENST00000443839 TNRQ92752 1358 aa13.33□□□□□ -0.28
SMPD4P1-203ENST00000443839 LAMC1P11047 1609 aa13.32□□□□□ -0.28
SMPD4P1-203ENST00000443839 VGFO15240 615 aaPredicted RBP13.31□□□□□ -0.28
SMPD4P1-203ENST00000443839 CEBPAP49715 358 aaPredicted RBP13.31□□□□□ -0.28
SMPD4P1-203ENST00000443839 NRXN1Q9ULB1 1477 aa13.31□□□□□ -0.28
SMPD4P1-203ENST00000443839 NEXMIFQ5QGS0 1516 aa13.31□□□□□ -0.28
SMPD4P1-203ENST00000443839 C3P01024 1663 aa13.31□□□□□ -0.28
SMPD4P1-203ENST00000443839 KIAA1210Q9ULL0 1709 aa13.3□□□□□ -0.28
SMPD4P1-203ENST00000443839 NUTM2DQ5VT03 806 aaPredicted RBP13.3□□□□□ -0.28
SMPD4P1-203ENST00000443839 PIK3C2GO75747 1445 aa13.29□□□□□ -0.28
SMPD4P1-203ENST00000443839 DDX10Q13206 875 aaKnown RBP13.29□□□□□ -0.28
SMPD4P1-203ENST00000443839 CFAP70Q5T0N1 1121 aa13.29□□□□□ -0.28
SMPD4P1-203ENST00000443839 A2ML1A8K2U0 1454 aa13.29□□□□□ -0.28
SMPD4P1-203ENST00000443839 ST20-MTHFSA0A0A6YYL1 179 aa13.28□□□□□ -0.28
SMPD4P1-203ENST00000443839 WASHC2AQ641Q2 1341 aa13.27□□□□□ -0.28
SMPD4P1-203ENST00000443839 RIMS1Q86UR5 1692 aaKnown RBP13.27□□□□□ -0.28
SMPD4P1-203ENST00000443839 ZFYVE9O95405 1425 aa13.27□□□□□ -0.29
SMPD4P1-203ENST00000443839 NLRP1Q9C000 1473 aa13.27□□□□□ -0.29
SMPD4P1-203ENST00000443839 C14orf93Q9H972 538 aaKnown RBP13.25□□□□□ -0.29
SMPD4P1-203ENST00000443839 ADAMTSL3P82987 1691 aa13.25□□□□□ -0.29
SMPD4P1-203ENST00000443839 CCDC7Q96M83 1385 aa13.25□□□□□ -0.29
SMPD4P1-203ENST00000443839 SCAF11Q99590 1463 aaKnown RBP13.25□□□□□ -0.29
SMPD4P1-203ENST00000443839 C11orf95C9JLR9 678 aaPredicted RBP13.25□□□□□ -0.29
SMPD4P1-203ENST00000443839 POLR1AO95602 1720 aaPredicted RBP13.25□□□□□ -0.29
SMPD4P1-203ENST00000443839 KDM5AP29375 1690 aaKnown RBP13.24□□□□□ -0.29
SMPD4P1-203ENST00000443839 IQGAP1P46940 1657 aa13.24□□□□□ -0.29
SMPD4P1-203ENST00000443839 RIMS2Q9UQ26 1411 aa13.24□□□□□ -0.29
SMPD4P1-203ENST00000443839 EIF3AQ14152 1382 aaKnown RBP13.24□□□□□ -0.29
SMPD4P1-203ENST00000443839 KIF7Q2M1P5 1343 aa13.24□□□□□ -0.29
SMPD4P1-203ENST00000443839 SETBP1Q9Y6X0 1596 aa13.24□□□□□ -0.29
SMPD4P1-203ENST00000443839 UBR1Q8IWV7 1749 aa13.23□□□□□ -0.29
SMPD4P1-203ENST00000443839 POLR3GLQ9BT43 218 aa13.22□□□□□ -0.29
SMPD4P1-203ENST00000443839 HDGFP51858 240 aaKnown RBP13.22□□□□□ -0.29
SMPD4P1-203ENST00000443839 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.22□□□□□ -0.29
SMPD4P1-203ENST00000443839 TMEM2Q9UHN6 1383 aa13.21□□□□□ -0.3
SMPD4P1-203ENST00000443839 ADGRB1O14514 1584 aa13.21□□□□□ -0.3
SMPD4P1-203ENST00000443839 TMEM132EQ6IEE7 984 aa13.21□□□□□ -0.3
SMPD4P1-203ENST00000443839 MIER1Q8N108 512 aa13.21□□□□□ -0.3
SMPD4P1-203ENST00000443839 MYO3AQ8NEV4 1616 aa13.21□□□□□ -0.3
SMPD4P1-203ENST00000443839 TESK2Q96S53 571 aa13.2□□□□□ -0.3
SMPD4P1-203ENST00000443839 TMF1P82094 1093 aa13.18□□□□□ -0.3
SMPD4P1-203ENST00000443839 TRAK1Q9UPV9 953 aa13.18□□□□□ -0.3
SMPD4P1-203ENST00000443839 ALKQ9UM73 1620 aa13.17□□□□□ -0.3
SMPD4P1-203ENST00000443839 THEMISQ8N1K5 641 aaPredicted RBP13.17□□□□□ -0.3
SMPD4P1-203ENST00000443839 BCANQ96GW7 911 aa13.16□□□□□ -0.3
SMPD4P1-203ENST00000443839 CEP170BQ9Y4F5 1589 aaPredicted RBP13.16□□□□□ -0.3
SMPD4P1-203ENST00000443839 DISP3Q9P2K9 1392 aa13.16□□□□□ -0.3
SMPD4P1-203ENST00000443839 SETD1BQ9UPS6 1966 aaKnown RBP13.16□□□□□ -0.3
SMPD4P1-203ENST00000443839 EID1Q9Y6B2 187 aa13.16□□□□□ -0.3
SMPD4P1-203ENST00000443839 CENPJQ9HC77 1338 aaPredicted RBP13.15□□□□□ -0.3
SMPD4P1-203ENST00000443839 ASXL1Q8IXJ9 1541 aa13.15□□□□□ -0.3
SMPD4P1-203ENST00000443839 PTPRMP28827 1452 aa13.15□□□□□ -0.3
SMPD4P1-203ENST00000443839 TXNDC2Q86VQ3 553 aa13.15□□□□□ -0.3
SMPD4P1-203ENST00000443839 STK26Q9P289 416 aa13.15□□□□□ -0.3
SMPD4P1-203ENST00000443839 SLIT1O75093 1534 aa13.14□□□□□ -0.31
SMPD4P1-203ENST00000443839 ANP32CO43423 234 aa13.13□□□□□ -0.31
SMPD4P1-203ENST00000443839 CDCA8Q53HL2 280 aa13.13□□□□□ -0.31
SMPD4P1-203ENST00000443839 YTHDC2Q9H6S0 1430 aaKnown RBP13.13□□□□□ -0.31
SMPD4P1-203ENST00000443839 LTKP29376 864 aa13.13□□□□□ -0.31
SMPD4P1-203ENST00000443839 ARHGAP23Q9P227 1491 aa13.13□□□□□ -0.31
SMPD4P1-203ENST00000443839 NRXN3Q9Y4C0 1643 aa13.13□□□□□ -0.31
SMPD4P1-203ENST00000443839 ARHGEF28Q8N1W1 1705 aaKnown RBP13.12□□□□□ -0.31
SMPD4P1-203ENST00000443839 PLEKHG1Q9ULL1 1385 aa13.12□□□□□ -0.31
SMPD4P1-203ENST00000443839 SBNO2Q9Y2G9 1366 aa13.12□□□□□ -0.31
SMPD4P1-203ENST00000443839 ZNF142P52746 1687 aaPredicted RBP13.12□□□□□ -0.31
SMPD4P1-203ENST00000443839 QRICH2Q9H0J4 1663 aa13.12□□□□□ -0.31
SMPD4P1-203ENST00000443839 SETD1AO15047 1707 aaKnown RBP13.11□□□□□ -0.31
SMPD4P1-203ENST00000443839 PPP4R3CPQ6ZMV5 832 aa13.1□□□□□ -0.31
SMPD4P1-203ENST00000443839 SAFB2Q14151 953 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMPD4P1-203ENST00000443839 POGKQ9P215 609 aa13.09□□□□□ -0.31
SMPD4P1-203ENST00000443839 METP08581 1390 aa13.09□□□□□ -0.31
SMPD4P1-203ENST00000443839 LRPPRCP42704 1394 aaKnown RBP13.09□□□□□ -0.31
SMPD4P1-203ENST00000443839 PIAS4Q8N2W9 510 aaPredicted RBP13.08□□□□□ -0.32
SMPD4P1-203ENST00000443839 PRAM1Q96QH2 718 aa13.08□□□□□ -0.32
SMPD4P1-203ENST00000443839 ADAMTS13Q76LX8 1427 aa13.08□□□□□ -0.32
SMPD4P1-203ENST00000443839 ABCC11Q96J66 1382 aa13.06□□□□□ -0.32
SMPD4P1-203ENST00000443839 ANKLE2Q86XL3 938 aa13.06□□□□□ -0.32
SMPD4P1-203ENST00000443839 SLC26A8Q96RN1 970 aa13.06□□□□□ -0.32
SMPD4P1-203ENST00000443839 DLC1Q96QB1 1528 aa13.05□□□□□ -0.32
SMPD4P1-203ENST00000443839 EVC2Q86UK5 1308 aa13.05□□□□□ -0.32
SMPD4P1-203ENST00000443839 MED14O60244 1454 aa13.04□□□□□ -0.32
SMPD4P1-203ENST00000443839 MINK1Q8N4C8 1332 aaPredicted RBP13.04□□□□□ -0.32
SMPD4P1-203ENST00000443839 SCAF1Q9H7N4 1312 aaKnown RBP13.04□□□□□ -0.32
SMPD4P1-203ENST00000443839 PANK3Q9H999 370 aa13.03□□□□□ -0.32
SMPD4P1-203ENST00000443839 TBX22Q9Y458 520 aa13.03□□□□□ -0.32
SMPD4P1-203ENST00000443839 DIP2AQ14689 1571 aa13.03□□□□□ -0.32
SMPD4P1-203ENST00000443839 KNDC1Q76NI1 1749 aa13.03□□□□□ -0.32
SMPD4P1-203ENST00000443839 CNGB1Q14028 1251 aaPredicted RBP13.03□□□□□ -0.32
SMPD4P1-203ENST00000443839 WAPLQ7Z5K2 1190 aa13.03□□□□□ -0.32
SMPD4P1-203ENST00000443839 TECPR2O15040 1411 aa13.02□□□□□ -0.32
SMPD4P1-203ENST00000443839 TULP4Q9NRJ4 1543 aa13.02□□□□□ -0.32
SMPD4P1-203ENST00000443839 PRKRIP1Q9H875 184 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms