RNA–Protein interactions for RNA: ENST00000443670.1

LINC01117-201, Transcript of long intergenic non-protein coding RNA 1117, humanhuman

TSL 5 BASIC

Gene LINC01117, Length 699 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01117-201ENST00000443670 TOM1O60784 492 aa31.28■■■□□ 2.6
LINC01117-201ENST00000443670 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.26■■■□□ 2.59
LINC01117-201ENST00000443670 SPHKAPQ2M3C7 1700 aa31.25■■■□□ 2.59
LINC01117-201ENST00000443670 TRIM52Q96A61 297 aa31.25■■■□□ 2.59
LINC01117-201ENST00000443670 PPP1R15AO75807 674 aaPredicted RBP31.24■■■□□ 2.59
LINC01117-201ENST00000443670 KCNA6P17658 529 aa31.24■■■□□ 2.59
LINC01117-201ENST00000443670 BCANQ96GW7 911 aa31.22■■■□□ 2.59
LINC01117-201ENST00000443670 ALKQ9UM73 1620 aa31.21■■■□□ 2.59
LINC01117-201ENST00000443670 TRPM2O94759 1503 aa31.19■■■□□ 2.58
LINC01117-201ENST00000443670 NUTM2DQ5VT03 806 aaPredicted RBP31.18■■■□□ 2.58
LINC01117-201ENST00000443670 SLC4A1APQ9BWU0 796 aaKnown RBP31.18■■■□□ 2.58
LINC01117-201ENST00000443670 PIP4K2BP78356 416 aa31.17■■■□□ 2.58
LINC01117-201ENST00000443670 SENP3Q9H4L4 574 aaPredicted RBP31.17■■■□□ 2.58
LINC01117-201ENST00000443670 TBX22Q9Y458 520 aa31.17■■■□□ 2.58
LINC01117-201ENST00000443670 NWD1Q149M9 1564 aa31.16■■■□□ 2.58
LINC01117-201ENST00000443670 ADAMTS13Q76LX8 1427 aa31.15■■■□□ 2.58
LINC01117-201ENST00000443670 CLTCL1P53675 1640 aa31.15■■■□□ 2.58
LINC01117-201ENST00000443670 SCAF1Q9H7N4 1312 aaKnown RBP31.14■■■□□ 2.58
LINC01117-201ENST00000443670 TMEM94Q12767 1356 aa31.13■■■□□ 2.57
LINC01117-201ENST00000443670 NKTRP30414 1462 aaKnown RBP31.13■■■□□ 2.57
LINC01117-201ENST00000443670 XIRP1Q702N8 1843 aaKnown RBP31.1■■■□□ 2.57
LINC01117-201ENST00000443670 PROSER2Q86WR7 435 aaPredicted RBP31.1■■■□□ 2.57
LINC01117-201ENST00000443670 ZNF326Q5BKZ1 582 aaKnown RBP31.08■■■□□ 2.57
LINC01117-201ENST00000443670 DIP2AQ14689 1571 aa31.08■■■□□ 2.57
LINC01117-201ENST00000443670 HSPA1LP34931 641 aa31.07■■■□□ 2.56
LINC01117-201ENST00000443670 PIK3R4Q99570 1358 aa31.06■■■□□ 2.56
LINC01117-201ENST00000443670 CHD2O14647 1828 aaKnown RBP31.04■■■□□ 2.56
LINC01117-201ENST00000443670 RBM33Q96EV2 1170 aaKnown RBP31.04■■■□□ 2.56
LINC01117-201ENST00000443670 MPHOSPH9Q99550 1183 aa31.03■■■□□ 2.56
LINC01117-201ENST00000443670 SETD5Q9C0A6 1442 aa31.03■■■□□ 2.56
LINC01117-201ENST00000443670 NEXMIFQ5QGS0 1516 aa31.02■■■□□ 2.56
LINC01117-201ENST00000443670 ACIN1Q9UKV3 1341 aaKnown RBP31.01■■■□□ 2.56
LINC01117-201ENST00000443670 SETBP1Q9Y6X0 1596 aa31.01■■■□□ 2.56
LINC01117-201ENST00000443670 FOXD1Q16676 465 aa31.01■■■□□ 2.55
LINC01117-201ENST00000443670 NRXN3Q9Y4C0 1643 aa30.98■■■□□ 2.55
LINC01117-201ENST00000443670 KIF1BO60333 1816 aa30.98■■■□□ 2.55
LINC01117-201ENST00000443670 PTPRUQ92729 1446 aa30.96■■■□□ 2.55
LINC01117-201ENST00000443670 NCOA3Q9Y6Q9 1424 aa30.95■■■□□ 2.54
LINC01117-201ENST00000443670 RPGRIP1LQ68CZ1 1315 aa30.94■■■□□ 2.54
LINC01117-201ENST00000443670 MSH6P52701 1360 aa30.93■■■□□ 2.54
LINC01117-201ENST00000443670 DISP3Q9P2K9 1392 aa30.93■■■□□ 2.54
LINC01117-201ENST00000443670 AMOTL2Q9Y2J4 779 aa30.93■■■□□ 2.54
LINC01117-201ENST00000443670 FAM135BQ49AJ0 1406 aa30.92■■■□□ 2.54
LINC01117-201ENST00000443670 RAB3GAP2Q9H2M9 1393 aa30.92■■■□□ 2.54
LINC01117-201ENST00000443670 CCDC144AA2RUR9 1427 aa30.9■■■□□ 2.54
LINC01117-201ENST00000443670 VGFO15240 615 aaPredicted RBP30.9■■■□□ 2.54
LINC01117-201ENST00000443670 METP08581 1390 aa30.9■■■□□ 2.54
LINC01117-201ENST00000443670 SPATA31E1Q6ZUB1 1445 aa30.85■■■□□ 2.53
LINC01117-201ENST00000443670 XRN1Q8IZH2 1706 aaKnown RBP30.84■■■□□ 2.53
LINC01117-201ENST00000443670 C19orf44Q9H6X5 657 aa30.82■■■□□ 2.52
LINC01117-201ENST00000443670 SLAIN2Q9P270 581 aa30.82■■■□□ 2.52
LINC01117-201ENST00000443670 C14orf37Q86TY3 774 aa30.81■■■□□ 2.52
LINC01117-201ENST00000443670 PPLO60437 1756 aa30.79■■■□□ 2.52
LINC01117-201ENST00000443670 ROBO1Q9Y6N7 1651 aa30.78■■■□□ 2.52
LINC01117-201ENST00000443670 HRCP23327 699 aa30.77■■■□□ 2.52
LINC01117-201ENST00000443670 RGL3Q3MIN7 710 aa30.77■■■□□ 2.52
LINC01117-201ENST00000443670 CADPS2Q86UW7 1296 aa30.76■■■□□ 2.51
LINC01117-201ENST00000443670 SETD1AO15047 1707 aaKnown RBP30.74■■■□□ 2.51
LINC01117-201ENST00000443670 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.73■■■□□ 2.51
LINC01117-201ENST00000443670 ATF3P18847 181 aa30.73■■■□□ 2.51
LINC01117-201ENST00000443670 ANKRD30BQ9BXX2 1392 aa30.73■■■□□ 2.51
LINC01117-201ENST00000443670 MED1Q15648 1581 aaPredicted RBP30.73■■■□□ 2.51
LINC01117-201ENST00000443670 ADGRF5Q8IZF2 1346 aa30.73■■■□□ 2.51
LINC01117-201ENST00000443670 ILDR2Q71H61 639 aa30.72■■■□□ 2.51
LINC01117-201ENST00000443670 DCCP43146 1447 aa30.71■■■□□ 2.51
LINC01117-201ENST00000443670 PRAG1Q86YV5 1406 aa30.7■■■□□ 2.5
LINC01117-201ENST00000443670 PTCH1Q13635 1447 aa30.68■■■□□ 2.5
LINC01117-201ENST00000443670 IFT172Q9UG01 1749 aa30.66■■■□□ 2.5
LINC01117-201ENST00000443670 ROBO2Q9HCK4 1378 aa30.66■■■□□ 2.5
LINC01117-201ENST00000443670 ADGRL3Q9HAR2 1447 aa30.65■■■□□ 2.5
LINC01117-201ENST00000443670 PIK3C2GO75747 1445 aa30.63■■■□□ 2.49
LINC01117-201ENST00000443670 MST1RQ04912 1400 aa30.6■■■□□ 2.49
LINC01117-201ENST00000443670 BRINP3Q76B58 766 aa30.58■■■□□ 2.49
LINC01117-201ENST00000443670 NRXN1Q9ULB1 1477 aa30.57■■■□□ 2.48
LINC01117-201ENST00000443670 NALCNQ8IZF0 1738 aa30.56■■■□□ 2.48
LINC01117-201ENST00000443670 MYOM2P54296 1465 aa30.56■■■□□ 2.48
LINC01117-201ENST00000443670 PHLPP1O60346 1717 aa30.56■■■□□ 2.48
LINC01117-201ENST00000443670 AHDC1Q5TGY3 1603 aaPredicted RBP30.55■■■□□ 2.48
LINC01117-201ENST00000443670 COL16A1Q07092 1604 aaPredicted RBP30.54■■■□□ 2.48
LINC01117-201ENST00000443670 LRPPRCP42704 1394 aaKnown RBP30.54■■■□□ 2.48
LINC01117-201ENST00000443670 ASXL1Q8IXJ9 1541 aa30.53■■■□□ 2.48
LINC01117-201ENST00000443670 TECPR2O15040 1411 aa30.53■■■□□ 2.48
LINC01117-201ENST00000443670 C14orf93Q9H972 538 aaKnown RBP30.52■■■□□ 2.48
LINC01117-201ENST00000443670 JCADQ9P266 1359 aa30.52■■■□□ 2.48
LINC01117-201ENST00000443670 TMEM132EQ6IEE7 984 aa30.51■■■□□ 2.47
LINC01117-201ENST00000443670 PHF23Q9BUL5 403 aaPredicted RBP30.51■■■□□ 2.47
LINC01117-201ENST00000443670 ABCC11Q96J66 1382 aa30.51■■■□□ 2.47
LINC01117-201ENST00000443670 STK26Q9P289 416 aa30.48■■■□□ 2.47
LINC01117-201ENST00000443670 C1orf167Q5SNV9 1468 aa30.46■■■□□ 2.47
LINC01117-201ENST00000443670 CFAP70Q5T0N1 1121 aa30.46■■■□□ 2.47
LINC01117-201ENST00000443670 YTHDC2Q9H6S0 1430 aaKnown RBP30.46■■■□□ 2.47
LINC01117-201ENST00000443670 SOCS7O14512 581 aa30.43■■■□□ 2.46
LINC01117-201ENST00000443670 WAPLQ7Z5K2 1190 aa30.42■■■□□ 2.46
LINC01117-201ENST00000443670 SIRT1Q96EB6 747 aa30.42■■■□□ 2.46
LINC01117-201ENST00000443670 RGS17Q9UGC6 210 aaPredicted RBP30.42■■■□□ 2.46
LINC01117-201ENST00000443670 KNDC1Q76NI1 1749 aa30.42■■■□□ 2.46
LINC01117-201ENST00000443670 PLEKHH1Q9ULM0 1364 aa30.41■■■□□ 2.46
LINC01117-201ENST00000443670 LAMC1P11047 1609 aa30.4■■■□□ 2.46
LINC01117-201ENST00000443670 STAC3Q96MF2 364 aa30.4■■■□□ 2.46
LINC01117-201ENST00000443670 NHSL1Q5SYE7 1610 aa30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms