RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 NOS1P29475 1434 aa23.22■■□□□ 1.31
MRPL40-202ENST00000443660 C14orf37Q86TY3 774 aa23.21■■□□□ 1.31
MRPL40-202ENST00000443660 MEX3CQ5U5Q3 659 aaKnown RBP23.2■■□□□ 1.3
MRPL40-202ENST00000443660 PTPN23Q9H3S7 1636 aa23.19■■□□□ 1.3
MRPL40-202ENST00000443660 ZNF772Q68DY9 489 aaPredicted RBP23.18■■□□□ 1.3
MRPL40-202ENST00000443660 ADGRB3O60242 1522 aa23.18■■□□□ 1.3
MRPL40-202ENST00000443660 SPATA31A6Q5VVP1 1343 aa23.17■■□□□ 1.3
MRPL40-202ENST00000443660 CROCC2H7BZ55 1655 aa23.17■■□□□ 1.3
MRPL40-202ENST00000443660 TBX22Q9Y458 520 aa23.17■■□□□ 1.3
MRPL40-202ENST00000443660 NWD1Q149M9 1564 aa23.17■■□□□ 1.3
MRPL40-202ENST00000443660 PLEKHG1Q9ULL1 1385 aa23.16■■□□□ 1.3
MRPL40-202ENST00000443660 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.15■■□□□ 1.3
MRPL40-202ENST00000443660 PHLPP1O60346 1717 aa23.15■■□□□ 1.3
MRPL40-202ENST00000443660 FGD6Q6ZV73 1430 aa23.15■■□□□ 1.3
MRPL40-202ENST00000443660 CADPS2Q86UW7 1296 aa23.14■■□□□ 1.29
MRPL40-202ENST00000443660 NCOA3Q9Y6Q9 1424 aa23.14■■□□□ 1.29
MRPL40-202ENST00000443660 ATF3P18847 181 aa23.13■■□□□ 1.29
MRPL40-202ENST00000443660 CHGAP10645 457 aaKnown RBP23.12■■□□□ 1.29
MRPL40-202ENST00000443660 C19orf44Q9H6X5 657 aa23.12■■□□□ 1.29
MRPL40-202ENST00000443660 RIMS2Q9UQ26 1411 aa23.12■■□□□ 1.29
MRPL40-202ENST00000443660 UPF1Q92900 1129 aaKnown RBP eCLIP23.11■■□□□ 1.29
MRPL40-202ENST00000443660 TRIM52Q96A61 297 aa23.11■■□□□ 1.29
MRPL40-202ENST00000443660 RPRD2Q5VT52 1461 aaKnown RBP23.11■■□□□ 1.29
MRPL40-202ENST00000443660 ZFYVE9O95405 1425 aa23.1■■□□□ 1.29
MRPL40-202ENST00000443660 RXRBP28702 533 aa23.08■■□□□ 1.29
MRPL40-202ENST00000443660 FAM50AQ14320 339 aaKnown RBP23.06■■□□□ 1.28
MRPL40-202ENST00000443660 NUTM2DQ5VT03 806 aaPredicted RBP23.06■■□□□ 1.28
MRPL40-202ENST00000443660 ANKRD50Q9ULJ7 1429 aa23.06■■□□□ 1.28
MRPL40-202ENST00000443660 SETD1AO15047 1707 aaKnown RBP23.05■■□□□ 1.28
MRPL40-202ENST00000443660 COL16A1Q07092 1604 aaPredicted RBP23.04■■□□□ 1.28
MRPL40-202ENST00000443660 LRP6O75581 1613 aa23.04■■□□□ 1.28
MRPL40-202ENST00000443660 CHD2O14647 1828 aaKnown RBP23.03■■□□□ 1.28
MRPL40-202ENST00000443660 NUTM2BA6NNL0 878 aaPredicted RBP23.03■■□□□ 1.28
MRPL40-202ENST00000443660 NUTM2EB1AL46 878 aaPredicted RBP23.03■■□□□ 1.28
MRPL40-202ENST00000443660 NUTM2AQ8IVF1 878 aaPredicted RBP23.03■■□□□ 1.28
MRPL40-202ENST00000443660 ADGRL2O95490 1459 aa23.03■■□□□ 1.28
MRPL40-202ENST00000443660 PIK3R4Q99570 1358 aa23.02■■□□□ 1.28
MRPL40-202ENST00000443660 AMOTL2Q9Y2J4 779 aa23.01■■□□□ 1.27
MRPL40-202ENST00000443660 BRINP3Q76B58 766 aa22.99■■□□□ 1.27
MRPL40-202ENST00000443660 ADAMTS13Q76LX8 1427 aa22.99■■□□□ 1.27
MRPL40-202ENST00000443660 TMEM131LA2VDJ0 1609 aa22.98■■□□□ 1.27
MRPL40-202ENST00000443660 AHDC1Q5TGY3 1603 aaPredicted RBP22.97■■□□□ 1.27
MRPL40-202ENST00000443660 GCC2Q8IWJ2 1684 aa22.95■■□□□ 1.26
MRPL40-202ENST00000443660 AFF2P51816 1311 aa22.94■■□□□ 1.26
MRPL40-202ENST00000443660 LRRC59Q96AG4 307 aaKnown RBP22.94■■□□□ 1.26
MRPL40-202ENST00000443660 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.94■■□□□ 1.26
MRPL40-202ENST00000443660 DIP2AQ14689 1571 aa22.93■■□□□ 1.26
MRPL40-202ENST00000443660 SHPRHQ149N8 1683 aa22.92■■□□□ 1.26
MRPL40-202ENST00000443660 MYO5BQ9ULV0 1848 aa22.91■■□□□ 1.26
MRPL40-202ENST00000443660 CDK12Q9NYV4 1490 aaPredicted RBP22.91■■□□□ 1.26
MRPL40-202ENST00000443660 TRPM2O94759 1503 aa22.9■■□□□ 1.26
MRPL40-202ENST00000443660 QTRT2Q9H974 415 aaKnown RBP22.89■■□□□ 1.25
MRPL40-202ENST00000443660 DCCP43146 1447 aa22.89■■□□□ 1.25
MRPL40-202ENST00000443660 C8orf37Q96NL8 207 aa22.88■■□□□ 1.25
MRPL40-202ENST00000443660 PTPRUQ92729 1446 aa22.88■■□□□ 1.25
MRPL40-202ENST00000443660 RBM6P78332 1123 aaKnown RBP22.87■■□□□ 1.25
MRPL40-202ENST00000443660 SETD5Q9C0A6 1442 aa22.87■■□□□ 1.25
MRPL40-202ENST00000443660 ZNF326Q5BKZ1 582 aaKnown RBP22.85■■□□□ 1.25
MRPL40-202ENST00000443660 NUP155O75694 1391 aa22.85■■□□□ 1.25
MRPL40-202ENST00000443660 ASXL1Q8IXJ9 1541 aa22.83■■□□□ 1.25
MRPL40-202ENST00000443660 UNC13BO14795 1591 aa22.82■■□□□ 1.24
MRPL40-202ENST00000443660 NGLY1Q96IV0 654 aa22.82■■□□□ 1.24
MRPL40-202ENST00000443660 MST1RQ04912 1400 aa22.82■■□□□ 1.24
MRPL40-202ENST00000443660 E9PCH4 1651 aa22.81■■□□□ 1.24
MRPL40-202ENST00000443660 ROCK1Q13464 1354 aa22.8■■□□□ 1.24
MRPL40-202ENST00000443660 DDX17Q92841 729 aaKnown RBP22.8■■□□□ 1.24
MRPL40-202ENST00000443660 ADAMTS2O95450 1211 aa22.78■■□□□ 1.24
MRPL40-202ENST00000443660 PNPLA6Q8IY17 1366 aa22.77■■□□□ 1.24
MRPL40-202ENST00000443660 FOXD1Q16676 465 aa22.77■■□□□ 1.24
MRPL40-202ENST00000443660 METP08581 1390 aa22.76■■□□□ 1.23
MRPL40-202ENST00000443660 RGS12O14924 1447 aa22.76■■□□□ 1.23
MRPL40-202ENST00000443660 IQGAP3Q86VI3 1631 aa22.75■■□□□ 1.23
MRPL40-202ENST00000443660 ITGAEP38570 1179 aa22.74■■□□□ 1.23
MRPL40-202ENST00000443660 ADGRL3Q9HAR2 1447 aa22.73■■□□□ 1.23
MRPL40-202ENST00000443660 SETBP1Q9Y6X0 1596 aa22.72■■□□□ 1.23
MRPL40-202ENST00000443660 USP21Q9UK80 565 aa22.72■■□□□ 1.23
MRPL40-202ENST00000443660 NHSL1Q5SYE7 1610 aa22.71■■□□□ 1.23
MRPL40-202ENST00000443660 TRPC5Q9UL62 973 aaPredicted RBP22.71■■□□□ 1.23
MRPL40-202ENST00000443660 ATAD2Q6PL18 1390 aa22.71■■□□□ 1.23
MRPL40-202ENST00000443660 XRN1Q8IZH2 1706 aaKnown RBP22.71■■□□□ 1.23
MRPL40-202ENST00000443660 ZRANB1Q9UGI0 708 aa22.68■■□□□ 1.22
MRPL40-202ENST00000443660 NRXN3Q9Y4C0 1643 aa22.68■■□□□ 1.22
MRPL40-202ENST00000443660 C1orf167Q5SNV9 1468 aa22.67■■□□□ 1.22
MRPL40-202ENST00000443660 SOS2Q07890 1332 aaPredicted RBP22.66■■□□□ 1.22
MRPL40-202ENST00000443660 ORAI2Q96SN7 254 aa22.66■■□□□ 1.22
MRPL40-202ENST00000443660 FNBP4Q8N3X1 1017 aaPredicted RBP22.65■■□□□ 1.22
MRPL40-202ENST00000443660 VGFO15240 615 aaPredicted RBP22.64■■□□□ 1.21
MRPL40-202ENST00000443660 CCDC125Q86Z20 511 aa22.62■■□□□ 1.21
MRPL40-202ENST00000443660 PTCH1Q13635 1447 aa22.61■■□□□ 1.21
MRPL40-202ENST00000443660 ROBO2Q9HCK4 1378 aa22.57■■□□□ 1.2
MRPL40-202ENST00000443660 SPHKAPQ2M3C7 1700 aa22.57■■□□□ 1.2
MRPL40-202ENST00000443660 NALCNQ8IZF0 1738 aa22.57■■□□□ 1.2
MRPL40-202ENST00000443660 ESCO1Q5FWF5 840 aa22.56■■□□□ 1.2
MRPL40-202ENST00000443660 NEXMIFQ5QGS0 1516 aa22.56■■□□□ 1.2
MRPL40-202ENST00000443660 ATRNO75882 1429 aa22.55■■□□□ 1.2
MRPL40-202ENST00000443660 NPHP3Q7Z494 1330 aa22.55■■□□□ 1.2
MRPL40-202ENST00000443660 RPGRIP1LQ68CZ1 1315 aa22.54■■□□□ 1.2
MRPL40-202ENST00000443660 SRCAPQ6ZRS2 3230 aa22.53■■□□□ 1.2
MRPL40-202ENST00000443660 GJD4Q96KN9 370 aaPredicted RBP22.52■■□□□ 1.2
MRPL40-202ENST00000443660 LAMC1P11047 1609 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms